RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 SAC3D1A6NKF1 404 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 NDUFS8O00217 210 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 F12P00748 615 aaPredicted RBP10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 IFNGP01579 166 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 IGHV4-39P01824 125 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 ZNF250P15622 560 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 HIST1H1CP16403 213 aaKnown RBP10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 STOMP27105 288 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 ALDH3A2P51648 485 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 UCP2P55851 309 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 SELENOVP59797 346 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 ESRRGP62508 458 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 HIST1H3AP68431 136 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 FAM209AQ5JX71 171 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 ZNF362Q5T0B9 420 aaPredicted RBP10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 OGFRL1Q5TC84 451 aaPredicted RBP10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 HIST2H3PS2Q5TEC6 136 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 ZBTB49Q6ZSB9 765 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 HIST2H3AQ71DI3 136 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 LRRC18Q8N456 261 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 NPEPL1Q8NDH3 523 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 OR2T4Q8NH00 348 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 EME1Q96AY2 570 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 C18orf12Q96KH6 178 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 COX4I2Q96KJ9 171 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 RDH12Q96NR8 316 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 DDOQ99489 341 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 RAB1BQ9H0U4 201 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 ELOVL3Q9HB03 270 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 PAPOLBQ9NRJ5 636 aaKnown RBP10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 KIF17Q9P2E2 1029 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 EIF3KQ9UBQ5 218 aaKnown RBP10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 NKX1-2Q9UD57 310 aaPredicted RBP10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 CGGBP1Q9UFW8 167 aaPredicted RBP10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 IL20RAQ9UHF4 553 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 KLHL21Q9UJP4 597 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 B9D1Q9UPM9 204 aa10.66□□□□□ -0.7
CLCNKA-205ENST00000477360 TEP1Q99973 2627 aaKnown RBP10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 IGLV3-9A0A075B6K5 115 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 A0A1W2PPL8 197 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 EI24O14681 340 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 SYNGR3O43761 229 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 ATP6V1G2O95670 118 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 PATE4P0C8F1 98 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 GAAP10253 952 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 IGFBP5P24593 272 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 CDKN1AP38936 164 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 GDI2P50395 445 aaKnown RBP10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 SLC25A1P53007 311 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 ECH1Q13011 328 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 TRIP10Q15642 601 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 LEG1Q6P5S2 330 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 CBR4Q8N4T8 237 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 CPEB3Q8NE35 698 aaKnown RBP10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 GJC3Q8NFK1 279 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 SLC26A10Q8NG04 563 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 OR8D4Q8NGM9 314 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 NEU4Q8WWR8 484 aaPredicted RBP10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 C11orf40Q8WZ69 217 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 NMNAT3Q96T66 252 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 GABARAPL3Q9BY60 117 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 HDHD2Q9H0R4 259 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 WNT5BQ9H1J7 359 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 RASSF4Q9H2L5 321 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 EGLN3Q9H6Z9 239 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 SLC25A19Q9HC21 320 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 CMC2Q9NRP2 79 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 KRT84Q9NSB2 600 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 TBC1D23Q9NUY8 699 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 TBCCD1Q9NVR7 557 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 SLCO1C1Q9NYB5 712 aa10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 COA3Q9Y2R0 106 aaPredicted RBP10.65□□□□□ -0.7
CLCNKA-205ENST00000477360 ACANP16112 2415 aa10.65□□□□□ -0.71
CLCNKA-205ENST00000477360 TMEM129A0AVI4 362 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 OR6C68A6NDL8 312 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 OR6C6A6NF89 314 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 E9PQ18 207 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 H7C1C5 153 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 SGCEO43556 437 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 APEX1P27695 318 aaKnown RBP10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 GRK5P34947 590 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 LIPAP38571 399 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 RGS6P49758 472 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 CRISP1P54107 249 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 RAD23AP54725 363 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 LCN6P62502 163 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 MRPS11P82912 194 aaKnown RBP10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 CDK5Q00535 292 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 CLEC12BQ2HXU8 276 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 TEX30Q5JUR7 227 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 KRT80Q6KB66 452 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 RGS7BPQ6MZT1 257 aaPredicted RBP10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 SLC27A4Q6P1M0 643 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 RHOUQ7L0Q8 258 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 OR6V1Q8N148 313 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 ZNF540Q8NDQ6 660 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 OR10H5Q8NGA6 315 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 OR52E2Q8NGJ4 325 aa10.64□□□□□ -0.71
CLCNKA-205ENST00000477360 OR4K13Q8NH42 304 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms