RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 PLPP2O43688 288 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 GPRIN2O60269 458 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 PTHP01270 115 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 IL2RAP01589 272 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 HTR1AP08908 422 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 CELA3AP09093 270 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 OR8G3PP0DMU2 310 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 CPEP16870 476 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 CTSSP25774 331 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 PSMB9P28065 219 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 TIMP3P35625 211 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 RFC3P40938 356 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 CCR9P51686 369 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 GTF2A1P52655 376 aaPredicted RBP6.2□□□□□ -1.42
SHQ1-207ENST00000475558 KRTAP10-9P60411 292 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 SIRPAP78324 504 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 MRPS34P82930 218 aaKnown RBP6.2□□□□□ -1.42
SHQ1-207ENST00000475558 ADORA2A-AS1P86434 159 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 TLE4Q04727 773 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 RAB39AQ14964 217 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 NEDD8Q15843 81 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 C3AR1Q16581 482 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 CDONQ4KMG0 1287 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 LRFN4Q6PJG9 635 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 KLHL24Q6TFL4 600 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF322Q6U7Q0 402 aaPredicted RBP6.2□□□□□ -1.42
SHQ1-207ENST00000475558 LINC00299Q6ZSB3 139 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 FOXL2NBQ6ZUU3 175 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF627Q7L945 461 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 BCDIN3DQ7Z5W3 292 aaKnown RBP6.2□□□□□ -1.42
SHQ1-207ENST00000475558 FGD2Q7Z6J4 655 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 LHFPL3Q86UP9 236 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 CDC20BQ86Y33 519 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 ERI1Q8IV48 349 aaKnown RBP6.2□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF100Q8IYN0 542 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF679Q8IYX0 411 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 TMEM123Q8N131 208 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 SYT14Q8NB59 555 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 NOXO1Q8NFA2 376 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 BBS1Q8NFJ9 593 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 OR4F15Q8NGB8 312 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 THEM6Q8WUY1 208 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 ROBO4Q8WZ75 1007 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 KISS1RQ969F8 398 aaPredicted RBP6.2□□□□□ -1.42
SHQ1-207ENST00000475558 APH1AQ96BI3 265 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 NMD3Q96D46 503 aaKnown RBP6.2□□□□□ -1.42
SHQ1-207ENST00000475558 ZMYND19Q96E35 227 aaPredicted RBP6.2□□□□□ -1.42
SHQ1-207ENST00000475558 OR2M2Q96R28 347 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 ALG8Q9BVK2 526 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 HDHD5Q9BXW7 423 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 SRXN1Q9BYN0 137 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 ULBP2Q9BZM5 246 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 SLCO5A1Q9H2Y9 848 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 TP63Q9H3D4 680 aaPredicted RBP6.2□□□□□ -1.42
SHQ1-207ENST00000475558 NELFAQ9H3P2 528 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 MED20Q9H944 212 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 SEC61A2Q9H9S3 476 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 PAK1IP1Q9NWT1 392 aaPredicted RBP6.2□□□□□ -1.42
SHQ1-207ENST00000475558 MED29Q9NX70 200 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 RSL24D1Q9UHA3 163 aaKnown RBP6.2□□□□□ -1.42
SHQ1-207ENST00000475558 FOXD3Q9UJU5 478 aaPredicted RBP6.2□□□□□ -1.42
SHQ1-207ENST00000475558 FBXL3Q9UKT7 428 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 SSR3Q9UNL2 185 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 TIMM10BQ9Y5J6 103 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 HRH3Q9Y5N1 445 aa6.2□□□□□ -1.42
SHQ1-207ENST00000475558 A0A1B0GTH9 108 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 POM121CA8CG34 1229 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF587BE7ETH6 402 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 H3BSA7 217 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 C19orf84I3L1E1 186 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 J3QLW9 94 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 M0R129 80 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 OGG1O15527 345 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 SS18L1O75177 396 aaPredicted RBP6.19□□□□□ -1.42
SHQ1-207ENST00000475558 IL18BPO95998 194 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 RAF1P04049 648 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 GYPBP06028 91 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 CST2P09228 141 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 LIMS3P0CW19 117 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 LIMS4P0CW20 117 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 HSMCR30P0CW71 290 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 CTLA4P16410 223 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 CD36P16671 472 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF12P17014 697 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 ZNF19P17023 458 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 MSR1P21757 451 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 PYCR1P32322 319 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 ARR3P36575 388 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 ETV1P50549 477 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 PSMD7P51665 324 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 RIDAP52758 137 aaKnown RBP6.19□□□□□ -1.42
SHQ1-207ENST00000475558 GRB2P62993 217 aaKnown RBP6.19□□□□□ -1.42
SHQ1-207ENST00000475558 ADAM8P78325 824 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 SCRN3Q0VDG4 424 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 TAF13Q15543 124 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 FBXW9Q5XUX1 488 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 OR7E24Q6IFN5 339 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 FDX2Q6P4F2 183 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 FAM214BQ7L5A3 538 aa6.19□□□□□ -1.42
SHQ1-207ENST00000475558 KRT77Q7Z794 578 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms