RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 A0A1B0GTI1 187 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 C10orf142B7Z368 130 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 PIN1P1O15428 100 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 CSTAP01040 98 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 TMIGD3P0DMS9 266 aaPredicted RBP11.72□□□□□ -0.53
CCNL1-216ENST00000475298 ZNF14P17017 642 aaPredicted RBP11.72□□□□□ -0.53
CCNL1-216ENST00000475298 RPL4P36578 427 aaKnown RBP11.72□□□□□ -0.53
CCNL1-216ENST00000475298 DLSTP36957 453 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 AKR1C3P42330 323 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 SPCS3P61009 180 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 ARHGAP11AQ6P4F7 1023 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 ULK3Q6PHR2 472 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 UNQ6126/PRO20091Q6UXV3 157 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 LINC00114Q6XXX2 140 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 BCORP1Q8N888 145 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 OR10H5Q8NGA6 315 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 S100A16Q96FQ6 103 aaKnown RBP11.72□□□□□ -0.53
CCNL1-216ENST00000475298 DGAT2Q96PD7 388 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 NMNAT3Q96T66 252 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 TPSD1Q9BZJ3 242 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.72□□□□□ -0.53
CCNL1-216ENST00000475298 OR5V1Q9UGF6 321 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 PCDHGA1Q9Y5H4 931 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 THADAQ6YHU6 1953 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 CPED1A4D0V7 1026 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 FAM171A2A8MVW0 826 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 NUDT19A8MXV4 375 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 F5H0A9 414 aaPredicted RBP11.72□□□□□ -0.53
CCNL1-216ENST00000475298 AP4M1O00189 453 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 PSMD9O00233 223 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 OGG1O15527 345 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 IFNGP01579 166 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 GRPRP30550 384 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 HOXA6P31267 233 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 RBM34P42696 430 aaKnown RBP11.72□□□□□ -0.53
CCNL1-216ENST00000475298 GPR3P46089 330 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 POU3F4P49335 361 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 RAB2AP61019 212 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 SRSF4Q08170 494 aaKnown RBP11.72□□□□□ -0.53
CCNL1-216ENST00000475298 ATXN7L3Q14CW9 347 aaPredicted RBP11.72□□□□□ -0.53
CCNL1-216ENST00000475298 INPP5JQ15735 1006 aaPredicted RBP11.72□□□□□ -0.53
CCNL1-216ENST00000475298 PCGF3Q3KNV8 242 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 NCMAPQ5T1S8 102 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 ZNF383Q8NA42 475 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 OR51S1Q8NGJ8 323 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 PMM1Q92871 262 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 CPNE4Q96A23 557 aaPredicted RBP11.72□□□□□ -0.53
CCNL1-216ENST00000475298 RASD2Q96D21 266 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 HAVCR1Q96D42 359 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 MMABQ96EY8 250 aaPredicted RBP11.72□□□□□ -0.53
CCNL1-216ENST00000475298 PRDM13Q9H4Q3 707 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 SEC61A2Q9H9S3 476 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 FKRPQ9H9S5 495 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 Q9N2J8 555 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 PPP1R14DQ9NXH3 145 aa11.72□□□□□ -0.53
CCNL1-216ENST00000475298 ZNF346Q9UL40 294 aaKnown RBP11.72□□□□□ -0.53
CCNL1-216ENST00000475298 TMEM131Q92545 1883 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 EML5Q05BV3 1969 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 LOC390937A0A1W2PQ73 354 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 OIP5O43482 229 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 CTNSO60931 367 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 NDUFB2O95178 105 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 MT-ND4LP03901 98 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 CD74P04233 296 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 SRMP19623 302 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 PSMB10P40306 273 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 PMELP40967 661 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 GFERP55789 205 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 PJVKQ0ZLH3 352 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 ELAVL1Q15717 326 aaKnown RBP11.71□□□□□ -0.53
CCNL1-216ENST00000475298 ZNF141Q15928 474 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 LRRC37A5PQ49AS3 106 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 KRT77Q7Z794 578 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 GLB1L2Q8IW92 636 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 ZNF321PQ8N8H1 164 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 SMRP1Q8NCR6 262 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 STEAP2Q8NFT2 490 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 OR5AP2Q8NGF4 316 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 AKR7LQ8NHP1 331 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 SLAMF9Q96A28 289 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 SMIM19Q96E16 107 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 PELI1Q96FA3 418 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 KLHDC7BQ96G42 594 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 TOLLIPQ9H0E2 274 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 SLC25A18Q9H1K4 315 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 OR10A5Q9H207 317 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 MKKSQ9NPJ1 570 aaPredicted RBP11.71□□□□□ -0.53
CCNL1-216ENST00000475298 SERTAD3Q9UJW9 196 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 SDK1Q7Z5N4 2213 aa11.71□□□□□ -0.53
CCNL1-216ENST00000475298 A6NLC8 198 aa11.71□□□□□ -0.54
CCNL1-216ENST00000475298 IFITM10A6NMD0 228 aa11.71□□□□□ -0.54
CCNL1-216ENST00000475298 IDSB3KWA1 339 aa11.71□□□□□ -0.54
CCNL1-216ENST00000475298 H7C417 338 aa11.71□□□□□ -0.54
CCNL1-216ENST00000475298 CPT2P23786 658 aa11.71□□□□□ -0.54
CCNL1-216ENST00000475298 ACKR3P25106 362 aa11.71□□□□□ -0.54
CCNL1-216ENST00000475298 ADH6P28332 368 aa11.71□□□□□ -0.54
CCNL1-216ENST00000475298 LIPNQ5VXI9 398 aa11.71□□□□□ -0.54
CCNL1-216ENST00000475298 OR5M8Q8NGP6 311 aa11.71□□□□□ -0.54
CCNL1-216ENST00000475298 NECAB3Q96P71 396 aaPredicted RBP11.71□□□□□ -0.54
CCNL1-216ENST00000475298 NEU1Q99519 415 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms