RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, human

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPHP3-206	ENST00000474871	OR5M9	Q8NGP3	310 aa		4.37	□□□□□ -1.71
NPHP3-206	ENST00000474871	FBXO25	Q8TCJ0	367 aa		4.37	□□□□□ -1.71
NPHP3-206	ENST00000474871	ZNF431	Q8TF32	576 aa	Predicted RBP	4.37	□□□□□ -1.71
NPHP3-206	ENST00000474871	ASB11	Q8WXH4	323 aa		4.37	□□□□□ -1.71
NPHP3-206	ENST00000474871	HIST1H2AC	Q93077	130 aa		4.37	□□□□□ -1.71
NPHP3-206	ENST00000474871	UCN3	Q969E3	161 aa		4.37	□□□□□ -1.71
NPHP3-206	ENST00000474871	THOC3	Q96J01	351 aa	Known RBP	4.37	□□□□□ -1.71
NPHP3-206	ENST00000474871	RCHY1	Q96PM5	261 aa		4.37	□□□□□ -1.71
NPHP3-206	ENST00000474871	VPS25	Q9BRG1	176 aa		4.37	□□□□□ -1.71
NPHP3-206	ENST00000474871	FGF21	Q9NSA1	209 aa		4.37	□□□□□ -1.71
NPHP3-206	ENST00000474871	PNPO	Q9NVS9	261 aa		4.37	□□□□□ -1.71
NPHP3-206	ENST00000474871	SLC2A8	Q9NY64	477 aa		4.37	□□□□□ -1.71
NPHP3-206	ENST00000474871	MRPL27	Q9P0M9	148 aa	Known RBP	4.37	□□□□□ -1.71
NPHP3-206	ENST00000474871	HSPB7	Q9UBY9	170 aa		4.37	□□□□□ -1.71
NPHP3-206	ENST00000474871	ZNF391	Q9UJN7	358 aa		4.37	□□□□□ -1.71
NPHP3-206	ENST00000474871	HIDE1	A8MVS5	230 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871		E5RGE8	158 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	TBL1X	O60907	577 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	PROSC	O94903	275 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	CST2	P09228	141 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	OR10J4	P0C629	311 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	KIR3DL1	P43629	444 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	RAB7A	P51149	207 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	RAG2	P55895	527 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	GABARAPL2	P60520	117 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	ACSM2A	Q08AH3	577 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	PTGES3	Q15185	160 aa	Known RBP	4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	TGIF1	Q15583	401 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	MRPL23	Q16540	153 aa	Known RBP	4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	CCL14	Q16627	93 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	ACSM2B	Q68CK6	577 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	ZNF585A	Q6P3V2	769 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	PODNL1	Q6PEZ8	512 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	C19orf48	Q6RUI8	117 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	LARP4	Q71RC2	724 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	MON1B	Q7L1V2	547 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	SSX7	Q7RTT5	188 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	SERPINA11	Q86U17	422 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	ADGRF3	Q8IZF5	1079 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	CSNK1A1L	Q8N752	337 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	BCORP1	Q8N888	145 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	TMEM185A	Q8NFB2	350 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	SARAF	Q96BY9	339 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	ATXN7L3B	Q96GX2	97 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871		Q96MT0	163 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	TMEM38B	Q9NVV0	291 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	BTBD3	Q9Y2F9	522 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	HEBP2	Q9Y5Z4	205 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	RAI1	Q7Z5J4	1906 aa	Predicted RBP	4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	ISM1	B1AKI9	464 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	RNASET2	O00584	256 aa	Known RBP	4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	PPP1R2P9	O14990	202 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	MAGEB4	O15481	346 aa	Predicted RBP	4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	LRAT	O95237	230 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	DUSP1	P28562	367 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	AGTR2	P50052	363 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	OR5I1	Q13606	314 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	LDLRAD2	Q5SZI1	272 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	C1orf194	Q5T5A4	169 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	KLHL17	Q6TDP4	642 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	FAM214B	Q7L5A3	538 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	SCD5	Q86SK9	330 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	DEFB106A	Q8N104	65 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	GABRG1	Q8N1C3	465 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871		Q8NA96	180 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	SLC30A7	Q8NEW0	376 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	ABHD4	Q8TB40	342 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	PTX4	Q96A99	478 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	PYCR2	Q96C36	320 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	SNRNP40	Q96DI7	357 aa	Known RBP	4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	XYLT2	Q9H1B5	865 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	UBQLN3	Q9H347	655 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	ZBTB20	Q9HC78	741 aa	Predicted RBP	4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	DLL4	Q9NR61	685 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	ERVK13-1	Q9NX77	482 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	SCN3B	Q9NY72	215 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	SLC45A2	Q9UMX9	530 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	A4GNT	Q9UNA3	340 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	GSTK1	Q9Y2Q3	226 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	OR10H1	Q9Y4A9	318 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871		A0A1B0GVI7	797 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871		A8MZ25	164 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	FAM220BP	B1ANY3	271 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	CS	O75390	466 aa	Known RBP	4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	ZNF432	O94892	652 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	CT62	P0C5K7	136 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	CTGF	P29279	349 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	FABP5	Q01469	135 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	SLC10A2	Q12908	348 aa	Predicted RBP	4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	CEACAM7	Q14002	265 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	OR1Q1	Q15612	314 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	CEACAM21	Q3KPI0	293 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	ZNF404	Q494X3	552 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	SLC36A2	Q495M3	483 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	TCEAL5	Q5H9L2	206 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	TPRG1L	Q5T0D9	272 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	ADAM5	Q6NVV9	412 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	STPG4	Q8N801	248 aa		4.36	□□□□□ -1.71
NPHP3-206	ENST00000474871	OR56A4	Q8NGH8	313 aa		4.36	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms