RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 SNX33Q8WV41 574 aa5.83□□□□□ -1.48
ATG4A-207ENST00000474825 PHYHIPQ92561 330 aa5.83□□□□□ -1.48
ATG4A-207ENST00000474825 EXTL1Q92935 676 aa5.83□□□□□ -1.48
ATG4A-207ENST00000474825 SMIM19Q96E16 107 aa5.83□□□□□ -1.48
ATG4A-207ENST00000474825 WBP1Q96G27 269 aa5.83□□□□□ -1.48
ATG4A-207ENST00000474825 GMPPAQ96IJ6 420 aaPredicted RBP5.83□□□□□ -1.48
ATG4A-207ENST00000474825 TBX5Q99593 518 aa5.83□□□□□ -1.48
ATG4A-207ENST00000474825 TTYH2Q9BSA4 534 aa5.83□□□□□ -1.48
ATG4A-207ENST00000474825 MED18Q9BUE0 208 aa5.83□□□□□ -1.48
ATG4A-207ENST00000474825 NXF2Q9GZY0 626 aaKnown RBP5.83□□□□□ -1.48
ATG4A-207ENST00000474825 NELFAQ9H3P2 528 aa5.83□□□□□ -1.48
ATG4A-207ENST00000474825 PNRC2Q9NPJ4 139 aaKnown RBP5.83□□□□□ -1.48
ATG4A-207ENST00000474825 DDX28Q9NUL7 540 aaKnown RBP5.83□□□□□ -1.48
ATG4A-207ENST00000474825 ACOXLQ9NUZ1 547 aa5.83□□□□□ -1.48
ATG4A-207ENST00000474825 SLCO1C1Q9NYB5 712 aa5.83□□□□□ -1.48
ATG4A-207ENST00000474825 LAMP5Q9UJQ1 280 aa5.83□□□□□ -1.48
ATG4A-207ENST00000474825 NOSIPQ9Y314 301 aaKnown RBP5.83□□□□□ -1.48
ATG4A-207ENST00000474825 LHFPL6Q9Y693 200 aa5.83□□□□□ -1.48
ATG4A-207ENST00000474825 A3GALT2U3KPV4 340 aa5.83□□□□□ -1.48
ATG4A-207ENST00000474825 KIAA1549Q9HCM3 1950 aa5.83□□□□□ -1.48
ATG4A-207ENST00000474825 FREM3P0C091 2139 aa5.83□□□□□ -1.48
ATG4A-207ENST00000474825 A0A1B0GTH9 108 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 A0A1W2PPW3 197 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 MBD3L4A6NDZ8 208 aaPredicted RBP5.82□□□□□ -1.48
ATG4A-207ENST00000474825 MBD3L3A6NE82 208 aaPredicted RBP5.82□□□□□ -1.48
ATG4A-207ENST00000474825 CCDC160A6NGH7 325 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 MBD3L5A6NJ08 208 aaPredicted RBP5.82□□□□□ -1.48
ATG4A-207ENST00000474825 SLC22A20A6NK97 555 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 OR4C45A6NMZ5 311 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 ERVH48-1M5A8F1 160 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 MAGEB4O15481 346 aaPredicted RBP5.82□□□□□ -1.48
ATG4A-207ENST00000474825 NOL3O60936 208 aaKnown RBP5.82□□□□□ -1.48
ATG4A-207ENST00000474825 MRPL33O75394 65 aaKnown RBP5.82□□□□□ -1.48
ATG4A-207ENST00000474825 CNOT4O95628 575 aaKnown RBP5.82□□□□□ -1.48
ATG4A-207ENST00000474825 HLA-DQA2P01906 255 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 KRT8P05787 483 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 HOXD4P09016 255 aaPredicted RBP5.82□□□□□ -1.48
ATG4A-207ENST00000474825 CST2P09228 141 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 MSR1P21757 451 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 AGTR1P30556 359 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 OTX1P32242 354 aaPredicted RBP5.82□□□□□ -1.48
ATG4A-207ENST00000474825 RPS27P42677 84 aaKnown RBP5.82□□□□□ -1.48
ATG4A-207ENST00000474825 OR3A2P47893 321 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 NANOS3P60323 173 aaKnown RBP5.82□□□□□ -1.48
ATG4A-207ENST00000474825 VBP1P61758 197 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 NCS1P62166 190 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 RPS25P62851 125 aaKnown RBP5.82□□□□□ -1.48
ATG4A-207ENST00000474825 FABP5Q01469 135 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 SRYQ05066 204 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 ALKBH1Q13686 389 aaKnown RBP5.82□□□□□ -1.48
ATG4A-207ENST00000474825 SF3B4Q15427 424 aaKnown RBP eCLIP5.82□□□□□ -1.48
ATG4A-207ENST00000474825 C3AR1Q16581 482 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 MEP1BQ16820 701 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 ACSF3Q4G176 576 aaPredicted RBP5.82□□□□□ -1.48
ATG4A-207ENST00000474825 TSPO2Q5TGU0 170 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 NSUN5P2Q63ZY6 315 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 Q6ZSR3 168 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 USP43Q70EL4 1123 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 CHMP1BQ7LBR1 199 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 CD163Q86VB7 1156 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 TUSC5Q8IXB3 177 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 IL17RDQ8NFM7 739 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 OR10S1Q8NGN2 331 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 OR6N1Q8NGY5 312 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 OR2G2Q8NGZ5 317 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 MBD3L2Q8NHZ7 208 aaPredicted RBP5.82□□□□□ -1.48
ATG4A-207ENST00000474825 THEM6Q8WUY1 208 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 NSMAFQ92636 917 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 GHSRQ92847 366 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 BBC3Q96PG8 261 aaPredicted RBP5.82□□□□□ -1.48
ATG4A-207ENST00000474825 SLX1AQ9BQ83 275 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 CENPOQ9BU64 300 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 ULBP2Q9BZM5 246 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 SLCO5A1Q9H2Y9 848 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 C1orf198Q9H425 327 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 RERGLQ9H628 205 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 NIPAL2Q9H841 368 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 GPR35Q9HC97 309 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 B3GAT2Q9NPZ5 323 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 SLC7A10Q9NS82 523 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 TMEM38BQ9NVV0 291 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 TXNL4BQ9NX01 149 aaKnown RBP5.82□□□□□ -1.48
ATG4A-207ENST00000474825 FRRS1LQ9P0K9 344 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 MALT1Q9UDY8 824 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 GDF2Q9UK05 429 aaPredicted RBP5.82□□□□□ -1.48
ATG4A-207ENST00000474825 SSR3Q9UNL2 185 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 CAMK2AQ9UQM7 478 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 ZNF835Q9Y2P0 537 aa5.82□□□□□ -1.48
ATG4A-207ENST00000474825 ATRXP46100 2492 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 ZNF407Q9C0G0 2248 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 TRBV5-5A0A0J9YX44 114 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 ACOD1A6NK06 481 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 GABRPO00591 440 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 WDR1O75083 606 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 GATBO75879 557 aaKnown RBP5.81□□□□□ -1.48
ATG4A-207ENST00000474825 ZFPL1O95159 310 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 WNT11O96014 354 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 PNPP00491 289 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 SERPINA3P01011 423 aa5.81□□□□□ -1.48
ATG4A-207ENST00000474825 IL1AP01583 271 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms