RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 PNRC2Q9NPJ4 139 aaKnown RBP6.06□□□□□ -1.44
LIMD1-204ENST00000474665 RASSF1Q9NS23 344 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 FAM118AQ9NWS6 357 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 AMDHD2Q9Y303 409 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 VPS13CQ709C8 3753 aa6.06□□□□□ -1.44
LIMD1-204ENST00000474665 LOC100509620A0A075B734 347 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 PRR32B1ATL7 298 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 SHISA9B4DS77 424 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 SMAD7O15105 426 aaKnown RBP6.05□□□□□ -1.44
LIMD1-204ENST00000474665 RER1O15258 196 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 TLX2O43763 284 aaPredicted RBP6.05□□□□□ -1.44
LIMD1-204ENST00000474665 CLIC3O95833 236 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 IFNGP01579 166 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 GNAO1P09471 354 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 CD79AP11912 226 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 NR2C1P13056 603 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 ZNF35P13682 527 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 ZNF3P17036 446 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 NPR2P20594 1047 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 MSR1P21757 451 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 ANOS1P23352 680 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 CD40P25942 277 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 CALCRP30988 508 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 HOXC12P31275 282 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 IDH3GP51553 393 aaPredicted RBP6.05□□□□□ -1.44
LIMD1-204ENST00000474665 RAD23AP54725 363 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 LSM6P62312 80 aaKnown RBP6.05□□□□□ -1.44
LIMD1-204ENST00000474665 RAB1AP62820 205 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 TEKQ02763 1124 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 HGFACQ04756 655 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 GLO1Q04760 184 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 RAB39AQ14964 217 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 MSMPQ1L6U9 139 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 CCDC92Q53HC0 331 aaPredicted RBP6.05□□□□□ -1.44
LIMD1-204ENST00000474665 BEX5Q5H9J7 111 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 PABPC1L2AQ5JQF8 200 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 SLC25A30Q5SVS4 291 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 C1QTNF12Q5T7M4 302 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 LAIR2Q6ISS4 152 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 SLC18B1Q6NT16 456 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 ZNF774Q6NX45 483 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 CFAP77Q6ZQR2 320 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.05□□□□□ -1.44
LIMD1-204ENST00000474665 TIGD4Q8IY51 512 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 CCDC36Q8IYA8 594 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 PROKR2Q8NFJ6 384 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 OR2T4Q8NH00 348 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 AKR7LQ8NHP1 331 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 RHOXF1Q8NHV9 184 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 TMEM163Q8TC26 289 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 APH1BQ8WW43 257 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 MUCL1Q96DR8 90 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 ZMYND19Q96E35 227 aaPredicted RBP6.05□□□□□ -1.44
LIMD1-204ENST00000474665 PIK3IP1Q96FE7 263 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 MAP6Q96JE9 813 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 SLC38A2Q96QD8 506 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 AMELYQ99218 206 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 OR51V1Q9H2C8 321 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 PLEKHF2Q9H8W4 249 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 SMPD3Q9NY59 655 aaPredicted RBP6.05□□□□□ -1.44
LIMD1-204ENST00000474665 ASH2LQ9UBL3 628 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 CYB5R1Q9UHQ9 305 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 KLHDC2Q9Y2U9 406 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 COMMD3-BMI1R4GMX3 469 aa6.05□□□□□ -1.44
LIMD1-204ENST00000474665 IGHV2OR16-5A0A0B4J2B6 119 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 LOC100130705A0A1B0GUX0 176 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 OR6C6A6NF89 314 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 PRR23D1E9PI22 279 aaPredicted RBP6.04□□□□□ -1.44
LIMD1-204ENST00000474665 ATP6V1G2-DDX39BF2Z307 99 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 H0YHG0 523 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 M0R1B8 84 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 ABCD4O14678 606 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 CASKO14936 926 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 PRODHO43272 600 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 SYNGR3O43761 229 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 SELENOFO60613 162 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 CRLF1O75462 422 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 WBP4O75554 376 aaKnown RBP6.04□□□□□ -1.44
LIMD1-204ENST00000474665 GLCEO94923 617 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 UBL3O95164 117 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 SERPINA5P05154 406 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 PRR23D2P0DMB1 279 aaPredicted RBP6.04□□□□□ -1.44
LIMD1-204ENST00000474665 CCL2P13500 99 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 APEX1P27695 318 aaKnown RBP6.04□□□□□ -1.44
LIMD1-204ENST00000474665 GSTT1P30711 240 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 ARR3P36575 388 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 CAPZA2P47755 286 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 PTDSS1P48651 473 aaKnown RBP6.04□□□□□ -1.44
LIMD1-204ENST00000474665 CENPAP49450 140 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 HCCSP53701 268 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 AQP4P55087 323 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 UBE2NP61088 152 aaKnown RBP6.04□□□□□ -1.44
LIMD1-204ENST00000474665 SNRPGP62308 76 aaKnown RBP6.04□□□□□ -1.44
LIMD1-204ENST00000474665 NAAAQ02083 359 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 APOFQ13790 326 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 GSG1Q2KHT4 349 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 KRTAP27-1Q3LI81 207 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 C3orf36Q3SXR2 165 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 TMEM255AQ5JRV8 349 aa6.04□□□□□ -1.44
LIMD1-204ENST00000474665 TEX30Q5JUR7 227 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms