RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 SRP9P49458 86 aaKnown RBP8.72□□□□□ -1.01
USP39-214ENST00000474572 ART1P52961 327 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 SUCLG1P53597 346 aaKnown RBP8.72□□□□□ -1.01
USP39-214ENST00000474572 CLDN12P56749 244 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 RPS18P62269 152 aaKnown RBP8.72□□□□□ -1.01
USP39-214ENST00000474572 RPS15P62841 145 aaKnown RBP8.72□□□□□ -1.01
USP39-214ENST00000474572 RAC1P63000 192 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 EIF3IQ13347 325 aaKnown RBP8.72□□□□□ -1.01
USP39-214ENST00000474572 C10orf128Q5T292 105 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 OLFML2AQ68BL7 652 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.72□□□□□ -1.01
USP39-214ENST00000474572 CDH24Q86UP0 819 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 LINC00346Q8IVM7 164 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 SIAH3Q8IW03 269 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 ELMOD2Q8IZ81 293 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 TCTE3Q8IZS6 198 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 BEST3Q8N1M1 668 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 DNAAF1Q8NEP3 725 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 DEDD2Q8WXF8 326 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 PPP1R14AQ96A00 147 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 SLC25A28Q96A46 364 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 S100A16Q96FQ6 103 aaKnown RBP8.72□□□□□ -1.01
USP39-214ENST00000474572 SCMH1Q96GD3 660 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 SMAD5Q99717 465 aaKnown RBP8.72□□□□□ -1.01
USP39-214ENST00000474572 TMEM185BQ9H7F4 350 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 AUNIPQ9H7T9 357 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 NIPAL2Q9H841 368 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 NEK6Q9HC98 313 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 COPZ2Q9P299 210 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 NUFIP1Q9UHK0 495 aaKnown RBP8.72□□□□□ -1.01
USP39-214ENST00000474572 EMC9Q9Y3B6 208 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 LHFPL6Q9Y693 200 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 SDK2Q58EX2 2172 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 NCKAP5O14513 1909 aa8.72□□□□□ -1.01
USP39-214ENST00000474572 LAMA1P25391 3075 aa8.71□□□□□ -1.01
USP39-214ENST00000474572 LOC107986453A0A1B0GWG9 222 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 CIB4A0PJX0 185 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 ANKRD20A5PA0PJZ0 165 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 MEGF11A6BM72 1044 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 NAP1L6A6NFF2 107 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 LRRC3CA6NJW4 275 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 CENPXA8MT69 81 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 C21orf140B9A014 251 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 ZNF878C9JN71 531 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 ACOT7O00154 380 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 LDLRAD4O15165 306 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 XRCC3O43542 346 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 KRT33AO76009 404 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 ECDO95905 644 aaPredicted RBP8.71□□□□□ -1.02
USP39-214ENST00000474572 TTRP02766 147 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 ITGA5P08648 1049 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 ACSM4P0C7M7 580 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 CDK2P24941 298 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 CTSSP25774 331 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 OTX2P32243 289 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 TAS2R20P59543 309 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 PSMA6P60900 246 aaKnown RBP8.71□□□□□ -1.02
USP39-214ENST00000474572 RRAS2P62070 204 aaPredicted RBP8.71□□□□□ -1.02
USP39-214ENST00000474572 LSM6P62312 80 aaKnown RBP8.71□□□□□ -1.02
USP39-214ENST00000474572 CSNK2A1P68400 391 aaPredicted RBP8.71□□□□□ -1.02
USP39-214ENST00000474572 MFAP5Q13361 173 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 CAMK2DQ13557 499 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 ELFN2Q5R3F8 820 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 C1orf100Q5SVJ3 147 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 GLT8D1Q68CQ7 371 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 ANKRD16Q6P6B7 361 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 CREB3L2Q70SY1 520 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 LINGO2Q7L985 606 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 PRSS45Q7RTY3 260 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 LIX1LQ8IVB5 337 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 OR52I2Q8NH67 350 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 KCNE4Q8WWG9 221 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 PSMF1Q92530 271 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 ZNF486Q96H40 463 aaPredicted RBP8.71□□□□□ -1.02
USP39-214ENST00000474572 RNF170Q96K19 258 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 ZFP3Q96NJ6 502 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 GNRHR2Q96P88 292 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 PIGQQ9BRB3 760 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 NAA11Q9BSU3 229 aaPredicted RBP8.71□□□□□ -1.02
USP39-214ENST00000474572 OR2B2Q9GZK3 357 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 PNRC2Q9NPJ4 139 aaKnown RBP8.71□□□□□ -1.02
USP39-214ENST00000474572 DDX28Q9NUL7 540 aaKnown RBP8.71□□□□□ -1.02
USP39-214ENST00000474572 TAS2R4Q9NYW5 299 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 GDF2Q9UK05 429 aaPredicted RBP8.71□□□□□ -1.02
USP39-214ENST00000474572 DKKL1Q9UK85 242 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 POU2F3Q9UKI9 436 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 CLEC4AQ9UMR7 237 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 PCDHGA1Q9Y5H4 931 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 N6AMT1Q9Y5N5 214 aa8.71□□□□□ -1.02
USP39-214ENST00000474572 A0A0J9YW62 118 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 LOC100289279A0A1B0GTE1 492 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 TMEM269A0A1B0GVZ9 245 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 A0A1W2PPL8 197 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 GJE1A6NN92 205 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 ZNF726A6NNF4 738 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 H0YC42 278 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 MASP2O00187 686 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 TLX3O43711 291 aaPredicted RBP8.7□□□□□ -1.02
USP39-214ENST00000474572 MT-CO3P00414 261 aa8.7□□□□□ -1.02
USP39-214ENST00000474572 IGLV3-1P01715 115 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms