RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 SNX33Q8WV41 574 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 HPS1Q92902 700 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 POP5Q969H6 163 aaKnown RBP9.56□□□□□ -0.88
CKS1B-206ENST00000474215 MSI2Q96DH6 328 aaKnown RBP9.56□□□□□ -0.88
CKS1B-206ENST00000474215 SAMD8Q96LT4 415 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 IFT27Q9BW83 186 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 TRIM15Q9C019 465 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 CHODLQ9H9P2 273 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 ELOVL3Q9HB03 270 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 TMEM160Q9NX00 188 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 FAM53CQ9NYF3 392 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 NKIRAS2Q9NYR9 191 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 TAS2R1Q9NYW7 299 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 NDRG4Q9ULP0 352 aaKnown RBP9.56□□□□□ -0.88
CKS1B-206ENST00000474215 PRPF19Q9UMS4 504 aaKnown RBP9.56□□□□□ -0.88
CKS1B-206ENST00000474215 ABCA1O95477 2261 aa9.56□□□□□ -0.88
CKS1B-206ENST00000474215 JMJD1CQ15652 2540 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 LRP5LA4QPB2 252 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 KIAA1324LA8MWY0 1029 aaPredicted RBP9.55□□□□□ -0.88
CKS1B-206ENST00000474215 H3BSA7 217 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 TNFRSF11BO00300 401 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 LMX1BO60663 402 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 NCR1O76036 304 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 RENP00797 406 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 ZNF16P17020 682 aaPredicted RBP9.55□□□□□ -0.88
CKS1B-206ENST00000474215 TUBG1P23258 451 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 MPV17P39210 176 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 MAGEA2P43356 314 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 CENPAP49450 140 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 ARHGDIAP52565 204 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 AQP6Q13520 282 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 CHRFAM7AQ494W8 412 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 MBNL2Q5VZF2 373 aaKnown RBP9.55□□□□□ -0.88
CKS1B-206ENST00000474215 OTPQ5XKR4 325 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 FAM166AQ6J272 317 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 LCN8Q6JVE9 175 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 PGBD2Q6P3X8 592 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 DNM1P34Q6PK57 102 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 RFPL4BQ6ZWI9 263 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 VASH1Q7L8A9 365 aaPredicted RBP9.55□□□□□ -0.88
CKS1B-206ENST00000474215 JAZF1Q86VZ6 243 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 OR6V1Q8N148 313 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 SLC25A40Q8TBP6 338 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 KLF14Q8TD94 323 aaPredicted RBP9.55□□□□□ -0.88
CKS1B-206ENST00000474215 YIPF5Q969M3 257 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 TSSK2Q96PF2 358 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 SNX18Q96RF0 628 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 NMNAT3Q96T66 252 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 BEX2Q9BXY8 128 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 OR2J1Q9GZK6 312 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 C1orf21Q9H246 121 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 MAGIXQ9H6Y5 334 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 SRA1Q9HD15 236 aaKnown RBP9.55□□□□□ -0.88
CKS1B-206ENST00000474215 TUBG2Q9NRH3 451 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 PLEK2Q9NYT0 353 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 ASH2LQ9UBL3 628 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 CDC42EP3Q9UKI2 254 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 B9D1Q9UPM9 204 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 LYVE1Q9Y5Y7 322 aa9.55□□□□□ -0.88
CKS1B-206ENST00000474215 ABCA2Q9BZC7 2435 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 IGLV1-36A0A0B4J1U3 117 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 PLSCR5A0PG75 271 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 DCTN6O00399 190 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 DOK2O60496 412 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 ABHD16AO95870 558 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 TGFAP01135 160 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 GASTP01350 101 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 HIST1H1CP16403 213 aaKnown RBP9.54□□□□□ -0.88
CKS1B-206ENST00000474215 NOS3P29474 1203 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 CRYBB2P43320 205 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 GPR6P46095 362 aaPredicted RBP9.54□□□□□ -0.88
CKS1B-206ENST00000474215 HTR5AP47898 357 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 ZNF81P51508 661 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 MMP15P51511 669 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 GLO1Q04760 184 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 TRIP10Q15642 601 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 FAM98BQ52LJ0 330 aaKnown RBP9.54□□□□□ -0.88
CKS1B-206ENST00000474215 ZNF770Q6IQ21 691 aaPredicted RBP9.54□□□□□ -0.88
CKS1B-206ENST00000474215 RPL13AP3Q6NVV1 102 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 LEG1Q6P5S2 330 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 PGM2L1Q6PCE3 622 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 ZNF620Q6ZNG0 422 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 OR4C15Q8NGM1 316 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 OR4K13Q8NH42 304 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 IPCEF1Q8WWN9 437 aaPredicted RBP9.54□□□□□ -0.88
CKS1B-206ENST00000474215 ASB9Q96DX5 294 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 SOX7Q9BT81 388 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 CYSLTR2Q9NS75 346 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 ZNF275Q9NSD4 429 aaPredicted RBP9.54□□□□□ -0.88
CKS1B-206ENST00000474215 DECR2Q9NUI1 292 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 TBCCD1Q9NVR7 557 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 KLHL21Q9UJP4 597 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 KCNS2Q9ULS6 477 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 GRIP1Q9Y3R0 1128 aa9.54□□□□□ -0.88
CKS1B-206ENST00000474215 SONP18583 2426 aaKnown RBP9.53□□□□□ -0.88
CKS1B-206ENST00000474215 FBN1P35555 2871 aaKnown RBP9.53□□□□□ -0.88
CKS1B-206ENST00000474215 OR6C68A6NDL8 312 aa9.53□□□□□ -0.88
CKS1B-206ENST00000474215 OR6C6A6NF89 314 aa9.53□□□□□ -0.88
CKS1B-206ENST00000474215 ACOT8O14734 319 aa9.53□□□□□ -0.88
CKS1B-206ENST00000474215 RER1O15258 196 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms