RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 RADILQ96JH8 1075 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 COX4I2Q96KJ9 171 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 SNX18Q96RF0 628 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 ZNF184Q99676 751 aaPredicted RBP11.33□□□□□ -0.6
TPM3-216ENST00000473036 CCL19Q99731 98 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 SLC29A1Q99808 456 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 APOL4Q9BPW4 351 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 DHRS9Q9BPW9 319 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 TRAF4Q9BUZ4 470 aaPredicted RBP11.33□□□□□ -0.6
TPM3-216ENST00000473036 HCAR1Q9BXC0 346 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 WNT5BQ9H1J7 359 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 RERGLQ9H628 205 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 RPRD1BQ9NQG5 326 aaKnown RBP11.33□□□□□ -0.6
TPM3-216ENST00000473036 TBC1D23Q9NUY8 699 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 TMEFF2Q9UIK5 374 aaPredicted RBP11.33□□□□□ -0.6
TPM3-216ENST00000473036 RAB26Q9ULW5 256 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 ATP23Q9Y6H3 246 aa11.33□□□□□ -0.6
TPM3-216ENST00000473036 LOC100509620A0A075B734 347 aa11.32□□□□□ -0.6
TPM3-216ENST00000473036 SLC16A6O15403 523 aa11.32□□□□□ -0.6
TPM3-216ENST00000473036 KHDRBS3O75525 346 aaKnown RBP11.32□□□□□ -0.6
TPM3-216ENST00000473036 FARS2O95363 451 aaKnown RBP11.32□□□□□ -0.6
TPM3-216ENST00000473036 MSR1P21757 451 aa11.32□□□□□ -0.6
TPM3-216ENST00000473036 APEX1P27695 318 aaKnown RBP11.32□□□□□ -0.6
TPM3-216ENST00000473036 EPHA2P29317 976 aa11.32□□□□□ -0.6
TPM3-216ENST00000473036 TTKP33981 857 aa11.32□□□□□ -0.6
TPM3-216ENST00000473036 THBS4P35443 961 aa11.32□□□□□ -0.6
TPM3-216ENST00000473036 CDKN1AP38936 164 aa11.32□□□□□ -0.6
TPM3-216ENST00000473036 CDC42P60953 191 aa11.32□□□□□ -0.6
TPM3-216ENST00000473036 CRMP1Q14194 572 aa11.32□□□□□ -0.6
TPM3-216ENST00000473036 PABPC1L2AQ5JQF8 200 aa11.32□□□□□ -0.6
TPM3-216ENST00000473036 TMEM236Q5W0B7 351 aa11.32□□□□□ -0.6
TPM3-216ENST00000473036 GLB1L2Q8IW92 636 aa11.32□□□□□ -0.6
TPM3-216ENST00000473036 SETD9Q8NE22 299 aa11.32□□□□□ -0.6
TPM3-216ENST00000473036 NRG4Q8WWG1 115 aa11.32□□□□□ -0.6
TPM3-216ENST00000473036 SMR3AQ99954 134 aa11.32□□□□□ -0.6
TPM3-216ENST00000473036 NMNAT2Q9BZQ4 307 aa11.32□□□□□ -0.6
TPM3-216ENST00000473036 MRPL22Q9NWU5 206 aaKnown RBP11.32□□□□□ -0.6
TPM3-216ENST00000473036 HSPE1-MOB4S4R3N1 261 aa11.32□□□□□ -0.6
TPM3-216ENST00000473036 HIVEP2P31629 2446 aa11.32□□□□□ -0.6
TPM3-216ENST00000473036 CHD3Q12873 2000 aaKnown RBP11.31□□□□□ -0.6
TPM3-216ENST00000473036 LOC100130705A0A1B0GUX0 176 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 TMEM129A0AVI4 362 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 GPRIN2O60269 458 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 NDUFS7O75251 213 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 RAB36O95755 333 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 IFNGP01579 166 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 CRYAAP02489 173 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 GYPBP06028 91 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 PAX1P15863 534 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 PAX7P23759 505 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 POU1F1P28069 291 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 PYCR1P32322 319 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 CDK5Q00535 292 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 GINS1Q14691 196 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 PTGES3Q15185 160 aaKnown RBP11.31□□□□□ -0.6
TPM3-216ENST00000473036 ADIPOQQ15848 244 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 KCNMB1Q16558 191 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 SWI5Q1ZZU3 235 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 SLC36A2Q495M3 483 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 KRT80Q6KB66 452 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 ZNF774Q6NX45 483 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 IZUMO2Q6UXV1 221 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 CXXC5Q7LFL8 322 aaKnown RBP11.31□□□□□ -0.6
TPM3-216ENST00000473036 JAZF1Q86VZ6 243 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 SLC30A7Q8NEW0 376 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 SLC26A10Q8NG04 563 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 OR51L1Q8NGJ5 315 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 OR9Q1Q8NGQ5 310 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 TMEM171Q8WVE6 324 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 NANOS1Q8WY41 292 aaKnown RBP11.31□□□□□ -0.6
TPM3-216ENST00000473036 PIGTQ969N2 578 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 PLEKHA8Q96JA3 519 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 HRASLS5Q96KN8 279 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 GRIP2Q9C0E4 1043 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 OR2H1Q9GZK4 316 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 RACGAP1Q9H0H5 632 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 TOR3AQ9H497 397 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 RIBC2Q9H4K1 309 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 RNF121Q9H920 327 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 MED20Q9H944 212 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 SLC25A19Q9HC21 320 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 CA10Q9NS85 328 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 ZNF701Q9NV72 531 aaPredicted RBP11.31□□□□□ -0.6
TPM3-216ENST00000473036 FAM118AQ9NWS6 357 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 POU2F3Q9UKI9 436 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 LHFPL6Q9Y693 200 aa11.31□□□□□ -0.6
TPM3-216ENST00000473036 MXRA5Q9NR99 2828 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 FAM183AA6NL82 134 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 SNTNA6NMZ2 147 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 NR4A1P22736 598 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 GRK5P34947 590 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 GGT2P36268 569 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 CAPGP40121 348 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 WNT5AP41221 380 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 FABP6P51161 128 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 CCDC92Q53HC0 331 aaPredicted RBP11.3□□□□□ -0.6
TPM3-216ENST00000473036 TMEM255AQ5JRV8 349 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 LINC01590Q5TEZ4 76 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 TMEM53Q6P2H8 277 aa11.3□□□□□ -0.6
TPM3-216ENST00000473036 VHLLQ6RSH7 139 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms