RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 ARPC1AQ92747 370 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 ZBTB9Q96C00 473 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 TMEM80Q96HE8 168 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 POM121L2Q96KW2 1035 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 SLC35A5Q9BS91 424 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 SLC29A3Q9BZD2 475 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 GPATCH2LQ9NWQ4 482 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 HMGXB4Q9UGU5 601 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 RALGAPA2Q2PPJ7 1873 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 SIP14410 1827 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 MUC6Q6W4X9 2439 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 A0A1B0GVI7 797 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 FABP12A6NFH5 140 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 PMS2P5A8MQ11 134 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 PRR23D1E9PI22 279 aaPredicted RBP2.1□□□□□ -2.07
XRN1-210ENST00000472697 SIRPB1O00241 398 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 TOR1AO14656 332 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 DPM1O60762 260 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 ZNF253O75346 499 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 ZFAND5O76080 213 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 CDK14O94921 469 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 SMC2O95347 1197 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 SLC2A10O95528 541 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 ETHE1O95571 254 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 IGHV2-5P01817 119 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 TPM3P06753 285 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 PRR23D2P0DMB1 279 aaPredicted RBP2.1□□□□□ -2.07
XRN1-210ENST00000472697 HSPD1P10809 573 aaKnown RBP2.1□□□□□ -2.07
XRN1-210ENST00000472697 LIPCP11150 499 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 SLC2A5P22732 501 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 HTR2CP28335 458 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 UGT2B10P36537 528 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 UBE2E1P51965 193 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 ERVK11-1P61568 191 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 LMO4P61968 165 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 CDKL1Q00532 357 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 KCNJ11Q14654 390 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 DGUOKQ16854 277 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 SLC22A6Q4U2R8 563 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 CYBRD1Q53TN4 286 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 NHLRC3Q5JS37 347 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 CCDC122Q5T0U0 273 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 TMIGD1Q6UXZ0 262 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 NCCRP1Q6ZVX7 275 aaPredicted RBP2.1□□□□□ -2.07
XRN1-210ENST00000472697 CHMP1BQ7LBR1 199 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 LHFPL3Q86UP9 236 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 C9orf40Q8IXQ3 194 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 KLHDC8BQ8IXV7 354 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 RDH10Q8IZV5 341 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 EID2Q8N6I1 236 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 WDR31Q8NA23 367 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 OR2AE1Q8NHA4 323 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 ITFG1Q8TB96 612 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 OR5P2Q8WZ92 322 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 UBE2E2Q96LR5 201 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 ZNF597Q96LX8 424 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 GLT1D1Q96MS3 346 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 TRNT1Q96Q11 434 aaKnown RBP2.1□□□□□ -2.07
XRN1-210ENST00000472697 FOXC2Q99958 501 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 C7orf50Q9BRJ6 194 aaKnown RBP2.1□□□□□ -2.07
XRN1-210ENST00000472697 ULBP2Q9BZM5 246 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 ZBP1Q9H171 429 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 DEFB129Q9H1M3 183 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 ADNPQ9H2P0 1102 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 FBXO8Q9NRD0 319 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 EHFQ9NZC4 300 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 MGAT4AQ9UM21 535 aa2.1□□□□□ -2.07
XRN1-210ENST00000472697 SLC22A20A6NK97 555 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 H0YHG0 523 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 CCL21O00585 134 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 TNFSF11O14788 317 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 MPDU1O75352 247 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 AMBPP02760 352 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 MYOGP15173 224 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 GGT1P19440 569 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 CCNOP22674 350 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 RRM2P31350 389 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 SLC1A1P43005 524 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 GPM6AP51674 278 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 CCR8P51685 355 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 NCF4Q15080 339 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 PXDC1Q5TGL8 231 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 AP1ARQ63HQ0 302 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 CD300LGQ6UXG3 332 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 CCDC50Q8IVM0 306 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 IQCKQ8N0W5 287 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 SLC34A3Q8N130 599 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 OR5K2Q8NHB8 316 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 RNASEH2CQ8TDP1 164 aaKnown RBP2.09□□□□□ -2.07
XRN1-210ENST00000472697 AGAP11Q8TF27 550 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 LRRC58Q96CX6 371 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 HSFY1Q96LI6 401 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 CSPG4P5Q96PW8 444 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 TSG101Q99816 390 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 TUBGCP2Q9BSJ2 902 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 SDHAF3Q9NRP4 125 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 SPRR3Q9UBC9 169 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 KCNG2Q9UJ96 466 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 V9GYY9 64 aa2.09□□□□□ -2.07
XRN1-210ENST00000472697 TET2Q6N021 2002 aaPredicted RBP2.09□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms