RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ECH1Q13011 328 aa14.72□□□□□ -0.05
CCM2-205ENST00000472223 SMN1Q16637 294 aaKnown RBP14.72□□□□□ -0.05
CCM2-205ENST00000472223 TMEM154Q6P9G4 183 aa14.72□□□□□ -0.05
CCM2-205ENST00000472223 LYPD4Q6UWN0 246 aa14.72□□□□□ -0.05
CCM2-205ENST00000472223 TUBA1AQ71U36 451 aa14.72□□□□□ -0.05
CCM2-205ENST00000472223 DCXRQ7Z4W1 244 aa14.72□□□□□ -0.05
CCM2-205ENST00000472223 MDP1Q86V88 176 aa14.72□□□□□ -0.05
CCM2-205ENST00000472223 LINC00346Q8IVM7 164 aa14.72□□□□□ -0.05
CCM2-205ENST00000472223 STX19Q8N4C7 294 aa14.72□□□□□ -0.05
CCM2-205ENST00000472223 WDR31Q8NA23 367 aa14.72□□□□□ -0.05
CCM2-205ENST00000472223 IL17RDQ8NFM7 739 aa14.72□□□□□ -0.05
CCM2-205ENST00000472223 OTOSQ8NHW6 89 aa14.72□□□□□ -0.05
CCM2-205ENST00000472223 WFIKKN1Q96NZ8 548 aa14.72□□□□□ -0.05
CCM2-205ENST00000472223 ADGRL4Q9HBW9 690 aa14.72□□□□□ -0.05
CCM2-205ENST00000472223 CNOT2Q9NZN8 540 aaKnown RBP14.72□□□□□ -0.05
CCM2-205ENST00000472223 GDF2Q9UK05 429 aaPredicted RBP14.72□□□□□ -0.05
CCM2-205ENST00000472223 SLC25A15Q9Y619 301 aa14.72□□□□□ -0.05
CCM2-205ENST00000472223 DAPL1A0PJW8 107 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 PTGES3LE9PB15 166 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 DOK2O60496 412 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 CCDC159P0C7I6 412 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 PATE4P0C8F1 98 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 MYL12AP19105 171 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 EEF1B2P24534 225 aaKnown RBP14.71□□□□□ -0.05
CCM2-205ENST00000472223 GRNP28799 593 aaKnown RBP14.71□□□□□ -0.05
CCM2-205ENST00000472223 APLNRP35414 380 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 SRSF1Q07955 248 aaKnown RBP eCLIP14.71□□□□□ -0.05
CCM2-205ENST00000472223 RAB35Q15286 201 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 PCK2Q16822 640 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 PABPC1L2AQ5JQF8 200 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 OTPQ5XKR4 325 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 CORO6Q6QEF8 472 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 TMEM108Q6UXF1 575 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 KRT77Q7Z794 578 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 ACBD7Q8N6N7 88 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 FAM169BQ8N8A8 192 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 LINC01560Q8TB33 94 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 IPCEF1Q8WWN9 437 aaPredicted RBP14.71□□□□□ -0.05
CCM2-205ENST00000472223 LGALS12Q96DT0 336 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 TMEM80Q96HE8 168 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 C1QTNF6Q9BXI9 259 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 YTHDF1Q9BYJ9 559 aaKnown RBP14.71□□□□□ -0.05
CCM2-205ENST00000472223 OR2H1Q9GZK4 316 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 HDHD2Q9H0R4 259 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 INPP5EQ9NRR6 644 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 CENPMQ9NSP4 180 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 MRPS18AQ9NVS2 196 aaKnown RBP14.71□□□□□ -0.05
CCM2-205ENST00000472223 B3GNT2Q9NY97 397 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 EXOGQ9Y2C4 368 aaKnown RBP14.71□□□□□ -0.05
CCM2-205ENST00000472223 LRCH1Q9Y2L9 728 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 LHFPL6Q9Y693 200 aa14.71□□□□□ -0.05
CCM2-205ENST00000472223 SPTBN1Q01082 2364 aaKnown RBP14.7□□□□□ -0.06
CCM2-205ENST00000472223 CLEC18AA5D8T8 446 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 M0R1B8 84 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 SLC1A7O00341 560 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 RER1O15258 196 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 SERPINA5P05154 406 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 MMP7P09237 267 aaPredicted RBP14.7□□□□□ -0.06
CCM2-205ENST00000472223 DCKP27707 260 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 HSD11B1P28845 292 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 CCKARP32238 428 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 RPS27P42677 84 aaKnown RBP14.7□□□□□ -0.06
CCM2-205ENST00000472223 GDI2P50395 445 aaKnown RBP14.7□□□□□ -0.06
CCM2-205ENST00000472223 ZNF83P51522 516 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 PSG4Q00888 419 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 TBC1D28Q2M2D7 210 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 C3orf36Q3SXR2 165 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 ELFN2Q5R3F8 820 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 ARL9Q6T311 187 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 CLEC18BQ6UXF7 455 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 UNQ6126/PRO20091Q6UXV3 157 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 MEX3BQ6ZN04 569 aaKnown RBP14.7□□□□□ -0.06
CCM2-205ENST00000472223 CDC20BQ86Y33 519 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 CLEC18CQ8NCF0 446 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 OR4F15Q8NGB8 312 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 FAM222BQ8WU58 562 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 SNX33Q8WV41 574 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 SPTSSAQ969W0 71 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 TBX5Q99593 518 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 COPS4Q9BT78 406 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 MROQ9BYG7 248 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 ESRP2Q9H6T0 727 aaKnown RBP14.7□□□□□ -0.06
CCM2-205ENST00000472223 NPDC1Q9NQX5 325 aaPredicted RBP14.7□□□□□ -0.06
CCM2-205ENST00000472223 PSORS1C1Q9UIG5 152 aa14.7□□□□□ -0.06
CCM2-205ENST00000472223 RELNP78509 3460 aa14.69□□□□□ -0.06
CCM2-205ENST00000472223 ZNF878C9JN71 531 aa14.69□□□□□ -0.06
CCM2-205ENST00000472223 XPNPEP2O43895 674 aa14.69□□□□□ -0.06
CCM2-205ENST00000472223 APOL3O95236 402 aa14.69□□□□□ -0.06
CCM2-205ENST00000472223 APOC1P02654 83 aa14.69□□□□□ -0.06
CCM2-205ENST00000472223 TACSTD2P09758 323 aa14.69□□□□□ -0.06
CCM2-205ENST00000472223 H2BFMP0C1H6 154 aa14.69□□□□□ -0.06
CCM2-205ENST00000472223 COX5BP10606 129 aa14.69□□□□□ -0.06
CCM2-205ENST00000472223 EPXP11678 715 aa14.69□□□□□ -0.06
CCM2-205ENST00000472223 PIPP12273 146 aaPredicted RBP14.69□□□□□ -0.06
CCM2-205ENST00000472223 STOMP27105 288 aa14.69□□□□□ -0.06
CCM2-205ENST00000472223 HTR5AP47898 357 aa14.69□□□□□ -0.06
CCM2-205ENST00000472223 IDH3GP51553 393 aaPredicted RBP14.69□□□□□ -0.06
CCM2-205ENST00000472223 GRB2P62993 217 aaKnown RBP14.69□□□□□ -0.06
CCM2-205ENST00000472223 ST3GAL4Q11206 333 aa14.69□□□□□ -0.06
CCM2-205ENST00000472223 RAB39AQ14964 217 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms