RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 LOC100289279A0A1B0GTE1 492 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 SERPINE3A8MV23 424 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 ZNF264O43296 627 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 MGPP08493 103 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 HTR1DP28221 377 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 SHC1P29353 583 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 MLLT11Q13015 90 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-210ENST00000471181 GLYATL3Q5SZD4 288 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 RPUSD3Q6P087 351 aaKnown RBP6.34□□□□□ -1.39
BRCA1-210ENST00000471181 LBX2Q6XYB7 198 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 RPL3LQ92901 407 aaKnown RBP6.34□□□□□ -1.39
BRCA1-210ENST00000471181 FAAP24Q9BTP7 215 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 CGGBP1Q9UFW8 167 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-210ENST00000471181 PADI1Q9ULC6 663 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 TMED7Q9Y3B3 224 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 ENTPD2Q9Y5L3 495 aa6.34□□□□□ -1.39
BRCA1-210ENST00000471181 ABCC6O95255 1503 aa6.34□□□□□ -1.4
BRCA1-210ENST00000471181 H7C2G1 150 aa6.34□□□□□ -1.4
BRCA1-210ENST00000471181 CA12O43570 354 aa6.34□□□□□ -1.4
BRCA1-210ENST00000471181 PMS2P2O95744 297 aa6.34□□□□□ -1.4
BRCA1-210ENST00000471181 ORM1P02763 201 aa6.34□□□□□ -1.4
BRCA1-210ENST00000471181 SLC25A5P05141 298 aaKnown RBP6.34□□□□□ -1.4
BRCA1-210ENST00000471181 FGF4P08620 206 aa6.34□□□□□ -1.4
BRCA1-210ENST00000471181 HSD17B1P14061 328 aa6.34□□□□□ -1.4
BRCA1-210ENST00000471181 CPMP14384 443 aa6.34□□□□□ -1.4
BRCA1-210ENST00000471181 TACR1P25103 407 aa6.34□□□□□ -1.4
BRCA1-210ENST00000471181 OPRD1P41143 372 aa6.34□□□□□ -1.4
BRCA1-210ENST00000471181 RFX2P48378 723 aa6.34□□□□□ -1.4
BRCA1-210ENST00000471181 FAM3AP98173 230 aa6.34□□□□□ -1.4
BRCA1-210ENST00000471181 MRPL2Q5T653 305 aaKnown RBP6.34□□□□□ -1.4
BRCA1-210ENST00000471181 DHRS13Q6UX07 377 aa6.34□□□□□ -1.4
BRCA1-210ENST00000471181 RBPMS2Q6ZRY4 209 aaKnown RBP6.34□□□□□ -1.4
BRCA1-210ENST00000471181 MYPOPQ86VE0 399 aaPredicted RBP6.34□□□□□ -1.4
BRCA1-210ENST00000471181 OR14A16Q8NHC5 309 aa6.34□□□□□ -1.4
BRCA1-210ENST00000471181 ZNF764Q96H86 408 aaPredicted RBP6.34□□□□□ -1.4
BRCA1-210ENST00000471181 FER1L6-AS2Q96M78 137 aa6.34□□□□□ -1.4
BRCA1-210ENST00000471181 EDEM2Q9BV94 578 aa6.34□□□□□ -1.4
BRCA1-210ENST00000471181 PLA2G12AQ9BZM1 189 aa6.34□□□□□ -1.4
BRCA1-210ENST00000471181 RAB22AQ9UL26 194 aa6.34□□□□□ -1.4
BRCA1-210ENST00000471181 WTIPA6NIX2 430 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-210ENST00000471181 MS4A18H0YCH9 400 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 KLRC4-KLRK1H3BQV0 150 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 PRSS1P07477 247 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 HNRNPA1P09651 372 aaKnown RBP eCLIP6.33□□□□□ -1.4
BRCA1-210ENST00000471181 FAM87AP0C7U9 286 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 PSMB5P28074 263 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 OR3A1P47881 315 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 ASCL1P50553 236 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 PPP1CBP62140 327 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 NPY5RQ15761 445 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 MS4A18Q3C1V0 323 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 SFXN4Q6P4A7 337 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 SIAH1Q8IUQ4 282 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 MISPQ8IVT2 679 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 FBXL16Q8N461 479 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 DYRK2Q92630 601 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 FAM131CQ96AQ9 280 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 MRAP2Q96G30 205 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 TAAR6Q96RI8 345 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 MUTYHQ9UIF7 546 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 MRPS2Q9Y399 296 aaKnown RBP6.33□□□□□ -1.4
BRCA1-210ENST00000471181 NFAT5O94916 1531 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 RGPD5Q99666 1765 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 UBE2L5PA0A1B0GUS4 154 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 NME4O00746 187 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 PAPLNO95428 1278 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 CD80P33681 288 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 EMP1P54849 157 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 DLX1P56177 255 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 SRSF9Q13242 221 aaKnown RBP eCLIP6.33□□□□□ -1.4
BRCA1-210ENST00000471181 COL5A1-AS1Q5SY13 56 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 COL13A1Q5TAT6 717 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-210ENST00000471181 TMEM65Q6PI78 240 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 BTNL3Q6UXE8 466 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 MAMSTRQ6ZN01 415 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 OR1L3Q8NH93 324 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 KHSRPQ92945 711 aaKnown RBP eCLIP6.33□□□□□ -1.44e-9■■■□□ 15.2
BRCA1-210ENST00000471181 RANBP9Q96S59 729 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 PCED1AQ9H1Q7 454 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 OR51B4Q9Y5P0 310 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 ST8SIA3O43173 380 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 WDR1O75083 606 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 DUS4LO95620 317 aaKnown RBP6.33□□□□□ -1.4
BRCA1-210ENST00000471181 SPI1P17947 270 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 EN2P19622 333 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-210ENST00000471181 COX5AP20674 150 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 FCGR2CP31995 323 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 KLRB1Q12918 225 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 STUMQ69YW2 141 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 TFAP2EQ6VUC0 442 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 DCXRQ7Z4W1 244 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 ZNF561Q8N587 486 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 NUDT10Q8NFP7 164 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 ROBO4Q8WZ75 1007 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 TMEM106AQ96A25 262 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 FAM3DQ96BQ1 224 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 NUDT11Q96G61 164 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 PTDSS2Q9BVG9 487 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 PRO1933Q9H354 126 aa6.33□□□□□ -1.4
BRCA1-210ENST00000471181 GPR55Q9Y2T6 319 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms