RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 CYLC2Q14093 348 aaPredicted RBP3.28□□□□□ -1.88
COL9A1-206ENST00000470652 HEPACAMQ14CZ8 416 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 CEBPEQ15744 281 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 SYPL1Q16563 259 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 ZNF774Q6NX45 483 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 TMEM205Q6UW68 189 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 C3P1Q6ZMU1 363 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 LINC00696Q6ZRV3 163 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 PAGE2Q7Z2X7 111 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 C6orf120Q7Z4R8 191 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 CPEB2Q7Z5Q1 589 aaKnown RBP3.28□□□□□ -1.88
COL9A1-206ENST00000470652 IFNEQ86WN2 208 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 LRRC25Q8N386 305 aaPredicted RBP3.28□□□□□ -1.88
COL9A1-206ENST00000470652 FAM86B1Q8N7N1 296 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 LSMEM1Q8N8F7 131 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 ZNF615Q8N8J6 731 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 GATSQ8NAP1 163 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 APCDD1LQ8NCL9 501 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 PLPP5Q8NEB5 264 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 CATSPER1Q8NEC5 780 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 FDCSPQ8NFU4 85 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 OR8J2Q8NGG1 315 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 OR10G7Q8NGN6 311 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 SLC26A7Q8TE54 656 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 ZFP90Q8TF47 636 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 PSMF1Q92530 271 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 FGF11Q92914 225 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 TESCQ96BS2 214 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 EFHD2Q96C19 240 aaPredicted RBP3.28□□□□□ -1.88
COL9A1-206ENST00000470652 LRRC58Q96CX6 371 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 DNAJA3Q96EY1 480 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 RMND5BQ96G75 393 aaPredicted RBP3.28□□□□□ -1.88
COL9A1-206ENST00000470652 IMMP1LQ96LU5 166 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 CCDC115Q96NT0 180 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 OR7D2Q96RA2 312 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 PANX1Q96RD7 426 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 ZBTB18Q99592 522 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 FAIM2Q9BWQ8 316 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 NXF5Q9H1B4 397 aaKnown RBP3.28□□□□□ -1.88
COL9A1-206ENST00000470652 SLC26A1Q9H2B4 701 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 PARLQ9H300 379 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 OR51I1Q9H343 314 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 RIMS4Q9H426 269 aaPredicted RBP3.28□□□□□ -1.88
COL9A1-206ENST00000470652 FOLH1BQ9HBA9 442 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 ZCCHC3Q9NUD5 404 aaKnown RBP3.28□□□□□ -1.88
COL9A1-206ENST00000470652 CTSZQ9UBR2 303 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 ZNF639Q9UID6 485 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 ANGPTL2Q9UKU9 493 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 NTNG1Q9Y2I2 539 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 NDUFAF1Q9Y375 327 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 TMED5Q9Y3A6 229 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 ZNF780BQ9Y6R6 833 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 SVILO95425 2214 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 ZNF407Q9C0G0 2248 aa3.28□□□□□ -1.88
COL9A1-206ENST00000470652 SMG1Q96Q15 3661 aaKnown RBP3.27□□□□□ -1.89
COL9A1-206ENST00000470652 A0A096LPI6 279 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 NSG1A0A0A6YYJ2 146 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 PRORSD1PA6NEY8 169 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 HMGN4O00479 90 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 ANGPT2O15123 496 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 TPST1O60507 370 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 FCMRO60667 390 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 CCDC22O60826 627 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 OR2J2O76002 312 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 OR6B1O95007 311 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 PSMG1O95456 288 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 EPPINO95925 133 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 YES1P07947 543 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 HBQ1P09105 142 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 SLC35E2P0CK97 266 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 CT45A8P0DMV1 189 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 CT45A9P0DMV2 189 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 MMP11P24347 488 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 NTSP30990 170 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 GABRA3P34903 492 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 CHI3L1P36222 383 aaPredicted RBP3.27□□□□□ -1.89
COL9A1-206ENST00000470652 CCT3P49368 545 aaKnown RBP3.27□□□□□ -1.89
COL9A1-206ENST00000470652 MRPL19P49406 292 aaKnown RBP3.27□□□□□ -1.89
COL9A1-206ENST00000470652 GSK3BP49841 420 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 CCL11P51671 97 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 HSD17B7P56937 341 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 ERVK-16P61578 105 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 RPS15P62841 145 aaKnown RBP3.27□□□□□ -1.89
COL9A1-206ENST00000470652 HOXC5Q00444 222 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 LIPEQ05469 1076 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 ZNF33BQ06732 778 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 FUT7Q11130 342 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 BNIP1Q12981 228 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 STX5Q13190 355 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 EBPQ15125 230 aaKnown RBP3.27□□□□□ -1.89
COL9A1-206ENST00000470652 MAPK14Q16539 360 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 TRMT5Q32P41 509 aaKnown RBP3.27□□□□□ -1.89
COL9A1-206ENST00000470652 PRR30Q53SZ7 412 aaPredicted RBP3.27□□□□□ -1.89
COL9A1-206ENST00000470652 CT45A2Q5DJT8 189 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 PRAMEF20Q5VT98 475 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 METTL21CQ5VZV1 264 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 SAXO2Q658L1 398 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 OR5M10Q6IEU7 315 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 NANOGP8Q6NSW7 305 aa3.27□□□□□ -1.89
COL9A1-206ENST00000470652 RPUSD3Q6P087 351 aaKnown RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms