RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 SMPD4Q9NXE4 827 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 B3GAT1Q9P2W7 334 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 ZNF230Q9UIE0 474 aaPredicted RBP4.61□□□□□ -1.67
COL3A1-205ENST00000470167 NUDT5Q9UKK9 219 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 PIGLQ9Y2B2 252 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 UFC1Q9Y3C8 167 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 YIPF1Q9Y548 306 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 WNT6Q9Y6F9 365 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 STYXL1Q9Y6J8 313 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 DUSP10Q9Y6W6 482 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 COL1A2P08123 1366 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 CRB1P82279 1406 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 GLI2P10070 1586 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 ALKQ9UM73 1620 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 PKD1L2Q7Z442 2459 aa4.61□□□□□ -1.67
COL3A1-205ENST00000470167 SIPA1L1O43166 1804 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 IGHV2OR16-5A0A0B4J2B6 119 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 C13orf42A0A1B0GVH6 325 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 SMCO3A2RU48 225 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 TVP23AA6NH52 213 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 RBFOX2O43251 390 aaKnown RBP eCLIP4.6□□□□□ -1.67
COL3A1-205ENST00000470167 LATO43561 262 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 SH3BGRLO75368 114 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 RDH16O75452 317 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 ANXA9O76027 345 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 ZNF432O94892 652 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 NDUFB8O95169 186 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 RCBTB2O95199 551 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 ANXA2P07355 339 aaKnown RBP4.6□□□□□ -1.67
COL3A1-205ENST00000470167 GKN3PP0CG01 181 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 SMIM17P0DL12 118 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 GZMBP10144 247 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 FCGR2AP12318 317 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 EPHA2P29317 976 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 TIA1P31483 386 aaKnown RBP eCLIP4.6□□□□□ -1.67
COL3A1-205ENST00000470167 PTGER1P34995 402 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 RPL4P36578 427 aaKnown RBP4.6□□□□□ -1.67
COL3A1-205ENST00000470167 KIR2DL3P43628 341 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 CNN1P51911 297 aaKnown RBP4.6□□□□□ -1.67
COL3A1-205ENST00000470167 HCCSP53701 268 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 RRADP55042 308 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 CDH12P55289 794 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 OR10A3P58181 314 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 RAB8AP61006 207 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 PPIAP62937 165 aaKnown RBP4.6□□□□□ -1.67
COL3A1-205ENST00000470167 LCN2P80188 198 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 SLC25A3Q00325 362 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 ID2Q02363 134 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 MLLT11Q13015 90 aaPredicted RBP4.6□□□□□ -1.67
COL3A1-205ENST00000470167 GAGE5Q13069 117 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 GAGE6Q13070 117 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 ITPK1Q13572 414 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 HTR4Q13639 388 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 GPR18Q14330 331 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 NR0B2Q15466 257 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 TAF13Q15543 124 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 UGT8Q16880 541 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 TCTN1Q2MV58 587 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 KHDC3LQ587J8 217 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 UTF1Q5T230 341 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 HENMT1Q5T8I9 393 aaKnown RBP4.6□□□□□ -1.67
COL3A1-205ENST00000470167 HECTD2Q5U5R9 776 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 DCAF12L2Q5VW00 463 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 LIPKQ5VXJ0 399 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 PRSS54Q6PEW0 395 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 LCTLQ6UWM7 567 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 WDR82Q6UXN9 313 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 ABHD15Q6UXT9 468 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 TMUB2Q71RG4 321 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 ERASQ7Z444 233 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 SERPINA11Q86U17 422 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 KLHDC8AQ8IYD2 350 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 ADGRF3Q8IZF5 1079 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 SMIM20Q8N5G0 67 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 SLC5A8Q8N695 610 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 SAMD12Q8N8I0 201 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 ZNF738Q8NE65 137 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 OR52L1Q8NGH7 329 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 OR6N1Q8NGY5 312 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 OR52E5Q8NH55 327 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 ABHD4Q8TB40 342 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 RDH11Q8TC12 318 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 LGALS14Q8TCE9 139 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 FBXO25Q8TCJ0 367 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 TNFAIP8L1Q8WVP5 186 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 ART4Q93070 314 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 UCN3Q969E3 161 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 OR10C1Q96KK4 312 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 ZFP3Q96NJ6 502 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 GINS4Q9BRT9 223 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 QTRT1Q9BXR0 403 aaKnown RBP4.6□□□□□ -1.67
COL3A1-205ENST00000470167 SLC46A2Q9BY10 475 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 OR8D2Q9GZM6 311 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 C11orf54Q9H0W9 315 aaPredicted RBP4.6□□□□□ -1.67
COL3A1-205ENST00000470167 ZBTB20Q9HC78 741 aaPredicted RBP4.6□□□□□ -1.67
COL3A1-205ENST00000470167 NOX4Q9NPH5 578 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 SERHLQ9NQF3 203 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 SLC17A5Q9NRA2 495 aa4.6□□□□□ -1.67
COL3A1-205ENST00000470167 MBNL3Q9NUK0 354 aaKnown RBP4.6□□□□□ -1.67
COL3A1-205ENST00000470167 RBFOX1Q9NWB1 397 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms