RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 MRPL23Q16540 153 aaKnown RBP3.32□□□□□ -1.88
LSM5-209ENST00000468872 CCDC73Q6ZRK6 1079 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 LINC00173Q6ZV60 143 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 TMEM135Q86UB9 458 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 MKXQ8IYA7 352 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 PDIK1LQ8N165 341 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 CCDC54Q8NEL0 328 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 RHEBL1Q8TAI7 183 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 CCDC126Q96EE4 140 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 PANX1Q96RD7 426 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 SLC29A1Q99808 456 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 OSBPL10Q9BXB5 764 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 GABARAPL3Q9BY60 117 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 OR51M1Q9H341 326 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 NEK6Q9HC98 313 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 CTPS2Q9NRF8 586 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 RAB20Q9NX57 234 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 ZNF226Q9NYT6 803 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 GNPTGQ9UJJ9 305 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 PITPNC1Q9UKF7 332 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 LRPPRCP42704 1394 aaKnown RBP3.32□□□□□ -1.88
LSM5-209ENST00000468872 BCL9O00512 1426 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 YTHDC2Q9H6S0 1430 aaKnown RBP3.32□□□□□ -1.88
LSM5-209ENST00000468872 RIMS2Q9UQ26 1411 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 CCDC18Q5T9S5 1454 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 PARP4Q9UKK3 1724 aaKnown RBP3.32□□□□□ -1.88
LSM5-209ENST00000468872 RBBP6Q7Z6E9 1792 aaKnown RBP3.32□□□□□ -1.88
LSM5-209ENST00000468872 SBF1O95248 1867 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 CFAP46Q8IYW2 2715 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 MYO9AB2RTY4 2548 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 KIAA1107Q9UPP5 1409 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 CEMIPQ8WUJ3 1361 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 IGHV3-64DA0A0J9YX35 117 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 SMCO3A2RU48 225 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 H3BNH8 94 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 MRPS12O15235 138 aaKnown RBP3.31□□□□□ -1.88
LSM5-209ENST00000468872 SUPT3HO75486 399 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 EEDO75530 441 aaKnown RBP3.31□□□□□ -1.88
LSM5-209ENST00000468872 CLPXO76031 633 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 CLIC3O95833 236 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 IGLV2-23P01705 113 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 KRT14P02533 472 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 PCCAP05165 728 aaPredicted RBP3.31□□□□□ -1.88
LSM5-209ENST00000468872 ZNF24P17028 368 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 ZNF30P17039 623 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 SERPINB5P36952 375 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 NAA10P41227 235 aaPredicted RBP3.31□□□□□ -1.88
LSM5-209ENST00000468872 NMUP48645 174 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 CSNK1DP48730 415 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 SSR4P51571 173 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 ACTA2P62736 377 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 ACTG2P63267 376 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 ACTC1P68032 377 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 ACTA1P68133 377 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 GBE1Q04446 702 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 RSPO1Q2MKA7 263 aaPredicted RBP3.31□□□□□ -1.88
LSM5-209ENST00000468872 ZBED5Q49AG3 693 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 ZNF658BQ4V348 819 aaPredicted RBP3.31□□□□□ -1.88
LSM5-209ENST00000468872 CYB5R2Q6BCY4 276 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 ANKRD26P1Q6NSI1 321 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 IGFL2Q6UWQ7 119 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 CAMK2N1Q7Z7J9 78 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 ARIH2OSQ8N7S6 290 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 OR51G1Q8NGK1 321 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 GEMIN6Q8WXD5 167 aaKnown RBP3.31□□□□□ -1.88
LSM5-209ENST00000468872 SLC38A4Q969I6 547 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 DNAJC19Q96DA6 116 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 ZNF578Q96N58 590 aaPredicted RBP3.31□□□□□ -1.88
LSM5-209ENST00000468872 CHP1Q99653 195 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 ECSITQ9BQ95 431 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 HDHD3Q9BSH5 251 aaPredicted RBP3.31□□□□□ -1.88
LSM5-209ENST00000468872 ZNF160Q9HCG1 818 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 DMAP1Q9NPF5 467 aaPredicted RBP3.31□□□□□ -1.88
LSM5-209ENST00000468872 PCYOX1Q9UHG3 505 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 VANGL2Q9ULK5 521 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 DNHD1Q96M86 4753 aa3.31□□□□□ -1.88
LSM5-209ENST00000468872 COL18A1P39060 1754 aa3.3□□□□□ -1.88
LSM5-209ENST00000468872 TIAM2Q8IVF5 1701 aa3.3□□□□□ -1.88
LSM5-209ENST00000468872 COL4A5P29400 1685 aa3.3□□□□□ -1.88
LSM5-209ENST00000468872 USP47Q96K76 1375 aa3.3□□□□□ -1.88
LSM5-209ENST00000468872 A0A075B6Q4 140 aa3.3□□□□□ -1.88
LSM5-209ENST00000468872 TRBV11-1A0A0K0K1C0 115 aa3.3□□□□□ -1.88
LSM5-209ENST00000468872 NKX2-6A6NCS4 301 aa3.3□□□□□ -1.88
LSM5-209ENST00000468872 F6UB75 175 aa3.3□□□□□ -1.88
LSM5-209ENST00000468872 LSM1O15116 133 aaKnown RBP3.3□□□□□ -1.88
LSM5-209ENST00000468872 PSG2P11465 335 aa3.3□□□□□ -1.88
LSM5-209ENST00000468872 PEX19P40855 299 aa3.3□□□□□ -1.88
LSM5-209ENST00000468872 AQP2P41181 271 aa3.3□□□□□ -1.88
LSM5-209ENST00000468872 TNNT2P45379 298 aaPredicted RBP3.3□□□□□ -1.88
LSM5-209ENST00000468872 COA6Q5JTJ3 125 aaKnown RBP3.3□□□□□ -1.88
LSM5-209ENST00000468872 LIX1Q8N485 282 aa3.3□□□□□ -1.88
LSM5-209ENST00000468872 MDS2Q8NDY4 140 aa3.3□□□□□ -1.88
LSM5-209ENST00000468872 ACTRT1Q8TDG2 376 aa3.3□□□□□ -1.88
LSM5-209ENST00000468872 CXorf40AQ8TE69 158 aa3.3□□□□□ -1.88
LSM5-209ENST00000468872 ASB9Q96DX5 294 aa3.3□□□□□ -1.88
LSM5-209ENST00000468872 DUS3LQ96G46 650 aaKnown RBP3.3□□□□□ -1.88
LSM5-209ENST00000468872 SH3GL3Q99963 347 aa3.3□□□□□ -1.88
LSM5-209ENST00000468872 RPF2Q9H7B2 306 aaKnown RBP3.3□□□□□ -1.88
LSM5-209ENST00000468872 TMEM185BQ9H7F4 350 aa3.3□□□□□ -1.88
LSM5-209ENST00000468872 ING4Q9UNL4 249 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms