RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 OR10H4Q8NGA5 316 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 OR6K6Q8NGW6 343 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 OR2T27Q8NH04 317 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 OR10D3Q8NH80 312 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 HTRA1Q92743 480 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 RACGAP1Q9H0H5 632 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 ACKR4Q9NPB9 350 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 TINAGQ9UJW2 476 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 DAPL1A0PJW8 107 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 SLC35F4A4IF30 521 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 MYL12BO14950 172 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 GATCO43716 136 aaKnown RBP7.33□□□□□ -1.24
BRCA1-208ENST00000468300 ZNF182P17025 639 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-208ENST00000468300 WNT5AP41221 380 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 LSM3P62310 102 aaKnown RBP7.33□□□□□ -1.24
BRCA1-208ENST00000468300 RPS25P62851 125 aaKnown RBP7.33□□□□□ -1.24
BRCA1-208ENST00000468300 PPIAP62937 165 aaKnown RBP7.33□□□□□ -1.24
BRCA1-208ENST00000468300 MEP1BQ16820 701 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 LRFN4Q6PJG9 635 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 IGFL3Q6UXB1 125 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 ESPNLQ6ZVH7 1005 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 CCDC28AQ8IWP9 274 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 MINDY2Q8NBR6 621 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 OR2T4Q8NH00 348 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 OR6X1Q8NH79 312 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 C4orf36Q96KX1 117 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 SFXN2Q96NB2 322 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 TTTY10Q9BZA0 68 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 SPRR3Q9UBC9 169 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 ST6GALNAC2Q9UJ37 374 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 RASD1Q9Y272 281 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 KLRC4-KLRK1H3BQV0 150 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 EIF1AYO14602 144 aaKnown RBP7.33□□□□□ -1.24
BRCA1-208ENST00000468300 DNPH1O43598 174 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 NOL3O60936 208 aaKnown RBP7.33□□□□□ -1.24
BRCA1-208ENST00000468300 RENP00797 406 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 GTF2E2P29084 291 aaKnown RBP7.33□□□□□ -1.24
BRCA1-208ENST00000468300 EIF2S3P41091 472 aaKnown RBP7.33□□□□□ -1.24
BRCA1-208ENST00000468300 ZNF133P52736 654 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-208ENST00000468300 GBX2P52951 348 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-208ENST00000468300 RPS3AP61247 264 aaKnown RBP7.33□□□□□ -1.24
BRCA1-208ENST00000468300 INSL4Q14641 139 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 Q5PR19 223 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 HBMQ6B0K9 141 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 RPTNQ6XPR3 784 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 GPAT4Q86UL3 456 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 KLBQ86Z14 1044 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 UEVLDQ8IX04 471 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 SPACA3Q8IXA5 215 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 KLHL36Q8N4N3 616 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 FAM169BQ8N8A8 192 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 SLC26A10Q8NG04 563 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 OR9K2Q8NGE7 335 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 DYNC2LI1Q8TCX1 351 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 PELI1Q96FA3 418 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 PGLYRP3Q96LB9 341 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 OR2M2Q96R28 347 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 DKK4Q9UBT3 224 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 FOXD3Q9UJU5 478 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-208ENST00000468300 COA3Q9Y2R0 106 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-208ENST00000468300 UGT2A1Q9Y4X1 527 aa7.33□□□□□ -1.24
BRCA1-208ENST00000468300 PHF3Q92576 2039 aaKnown RBP7.33□□□□□ -1.24
BRCA1-208ENST00000468300 A6NIZ1 184 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 NPIPA5E9PKD4 350 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 H7C1Q1 480 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 XKRYO14609 159 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 CXCL13O43927 109 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 ALOX5APP20292 161 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 RAP1BP61224 184 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 TSPAN5P62079 268 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 RAP1AP62834 184 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 BDH1Q02338 343 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 TBRG1Q3YBR2 411 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 TMEM225Q6GV28 225 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 SLC25A47Q6Q0C1 308 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 IDO2Q6ZQW0 420 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 OR2V1Q8NHB1 315 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 CA5BP1Q8WTZ4 195 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 ROBO4Q8WZ75 1007 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 TMEM54Q969K7 222 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 SLC25A44Q96H78 314 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-208ENST00000468300 GPR61Q9BZJ8 451 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.32□□□□□ -1.24
BRCA1-208ENST00000468300 BABAM2Q9NXR7 383 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 MRM2Q9UI43 246 aaKnown RBP7.32□□□□□ -1.24
BRCA1-208ENST00000468300 NPIPA1Q9UND3 350 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 GRIP1Q9Y3R0 1128 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 hCG_1809904A0A1W2PP81 198 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 A0A1W2PPE2 198 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 A0A1W2PR64 198 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 GJE1A6NN92 205 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 M0R3G1 203 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 SEC14L5O43304 696 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 AIREO43918 545 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 EIF1BO60739 113 aaKnown RBP7.32□□□□□ -1.24
BRCA1-208ENST00000468300 UPK3AO75631 287 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 CCNKO75909 580 aa7.32□□□□□ -1.24
BRCA1-208ENST00000468300 PTBP3O95758 552 aaKnown RBP7.32□□□□□ -1.24
BRCA1-208ENST00000468300 POU3F2P20265 443 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-208ENST00000468300 SDHBP21912 280 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms