RNA–Protein interactions for RNA: ENST00000467329.5

PRPF3-202, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 5

Gene PRPF3, Length 2,595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-202ENST00000467329 EMC7Q9NPA0 242 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 NOSIPQ9Y314 301 aaKnown RBP8.34□□□□□ -1.07
PRPF3-202ENST00000467329 TNRC6AQ8NDV7 1962 aaKnown RBP8.34□□□□□ -1.07
PRPF3-202ENST00000467329 FREM3P0C091 2139 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 CEP250Q9BV73 2442 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 TRBV5-7A0A0A0MS05 114 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 OR14I1A6ND48 311 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 RPL36A-HNRNPH2H7BZ11 118 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 K7ENP7 123 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 PSMD9O00233 223 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 YES1P07947 543 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 CST2P09228 141 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 CTSSP25774 331 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 S100A5P33763 92 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 MMP16P51512 607 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 BMXP51813 675 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 GRB2P62993 217 aaKnown RBP8.34□□□□□ -1.07
PRPF3-202ENST00000467329 PMP22Q01453 160 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 HNRNPA0Q13151 305 aaKnown RBP8.34□□□□□ -1.07
PRPF3-202ENST00000467329 Q499Y3 187 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 WDR38Q5JTN6 314 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 INO80CQ6PI98 192 aaPredicted RBP8.34□□□□□ -1.07
PRPF3-202ENST00000467329 KLHL24Q6TFL4 600 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 ADGRE4PQ86SQ3 457 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 LINC00346Q8IVM7 164 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 PRSS35Q8N3Z0 413 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 IL17RDQ8NFM7 739 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 GPR148Q8TDV2 347 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 SARAFQ96BY9 339 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 DERL3Q96Q80 235 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 PRRG4Q9BZD6 226 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 SLCO5A1Q9H2Y9 848 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 DDX28Q9NUL7 540 aaKnown RBP8.34□□□□□ -1.07
PRPF3-202ENST00000467329 TMEM38BQ9NVV0 291 aa8.34□□□□□ -1.07
PRPF3-202ENST00000467329 PDCD5O14737 125 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 MRPL33O75394 65 aaKnown RBP8.33□□□□□ -1.08
PRPF3-202ENST00000467329 CRYABP02511 175 aaKnown RBP8.33□□□□□ -1.08
PRPF3-202ENST00000467329 ISG15P05161 165 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 ACHEP22303 614 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 PSMA6P60900 246 aaKnown RBP8.33□□□□□ -1.08
PRPF3-202ENST00000467329 ZNF704Q6ZNC4 412 aaPredicted RBP8.33□□□□□ -1.08
PRPF3-202ENST00000467329 ZNF627Q7L945 461 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 SYT9Q86SS6 491 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.33□□□□□ -1.08
PRPF3-202ENST00000467329 MCEMP1Q8IX19 187 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 ZNF676Q8N7Q3 588 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 GJC3Q8NFK1 279 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 OR10S1Q8NGN2 331 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 HSD17B8Q92506 261 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 PDCD1LG2Q9BQ51 273 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 GPR35Q9HC97 309 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 PNRC2Q9NPJ4 139 aaKnown RBP8.33□□□□□ -1.08
PRPF3-202ENST00000467329 PLEKHB1Q9UF11 243 aaPredicted RBP8.33□□□□□ -1.08
PRPF3-202ENST00000467329 CAMK2AQ9UQM7 478 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 SLC22A20A6NK97 555 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 LOC110117498-PIK3R3F6TDL0 507 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 WNT11O96014 354 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 CLEC2LP0C7M8 214 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 UBCP0CG48 685 aaKnown RBP8.33□□□□□ -1.08
PRPF3-202ENST00000467329 CALRP27797 417 aaKnown RBP8.33□□□□□ -1.08
PRPF3-202ENST00000467329 CDAP32320 146 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 NTF4P34130 210 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 SGCAQ16586 387 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 HSD17B12Q53GQ0 312 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 OR7E24Q6IFN5 339 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 MZT2AQ6P582 158 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 CFAP77Q6ZQR2 320 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 FNDC9Q8TBE3 224 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 SNRNP27Q8WVK2 155 aaKnown RBP8.33□□□□□ -1.08
PRPF3-202ENST00000467329 ZNF416Q9BWM5 594 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 ZCCHC4Q9H5U6 513 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 FAM206AQ9NX38 181 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 CLCF1Q9UBD9 225 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 B3GNT3Q9Y2A9 372 aa8.33□□□□□ -1.08
PRPF3-202ENST00000467329 SS18L1O75177 396 aaPredicted RBP8.32□□□□□ -1.08
PRPF3-202ENST00000467329 BMP4P12644 408 aa8.32□□□□□ -1.08
PRPF3-202ENST00000467329 TMPRSS3P57727 454 aa8.32□□□□□ -1.08
PRPF3-202ENST00000467329 PCBD1P61457 104 aa8.32□□□□□ -1.08
PRPF3-202ENST00000467329 ZNF45Q02386 682 aa8.32□□□□□ -1.08
PRPF3-202ENST00000467329 MFGE8Q08431 387 aaPredicted RBP8.32□□□□□ -1.08
PRPF3-202ENST00000467329 ECH1Q13011 328 aa8.32□□□□□ -1.08
PRPF3-202ENST00000467329 INSL4Q14641 139 aa8.32□□□□□ -1.08
PRPF3-202ENST00000467329 SF3B4Q15427 424 aaKnown RBP eCLIP8.32□□□□□ -1.086e-8■■■■□ 21.7
PRPF3-202ENST00000467329 TMEM244Q5VVB8 128 aa8.32□□□□□ -1.08
PRPF3-202ENST00000467329 RBMXL3Q8N7X1 1067 aaKnown RBP8.32□□□□□ -1.08
PRPF3-202ENST00000467329 OR13C5Q8NGS8 318 aa8.32□□□□□ -1.08
PRPF3-202ENST00000467329 RBM24Q9BX46 236 aaKnown RBP8.32□□□□□ -1.08
PRPF3-202ENST00000467329 C6orf62Q9GZU0 229 aaPredicted RBP8.32□□□□□ -1.08
PRPF3-202ENST00000467329 G6PC2Q9NQR9 355 aa8.32□□□□□ -1.08
PRPF3-202ENST00000467329 ASH2LQ9UBL3 628 aa8.32□□□□□ -1.08
PRPF3-202ENST00000467329 OR52A1Q9UKL2 312 aa8.32□□□□□ -1.08
PRPF3-202ENST00000467329 A0A0C4DFX4 3053 aa8.32□□□□□ -1.08
PRPF3-202ENST00000467329 SHISA3A0PJX4 238 aa8.32□□□□□ -1.08
PRPF3-202ENST00000467329 TTLL8A6PVC2 850 aa8.32□□□□□ -1.08
PRPF3-202ENST00000467329 PNPP00491 289 aa8.32□□□□□ -1.08
PRPF3-202ENST00000467329 APOC1P02654 83 aa8.32□□□□□ -1.08
PRPF3-202ENST00000467329 CD40LGP29965 261 aa8.32□□□□□ -1.08
PRPF3-202ENST00000467329 PPP3R1P63098 170 aa8.32□□□□□ -1.08
PRPF3-202ENST00000467329 MXD1Q05195 221 aa8.32□□□□□ -1.08
PRPF3-202ENST00000467329 SCRN3Q0VDG4 424 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms