RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 RFKQ969G6 155 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 ALKBH3Q96Q83 286 aaPredicted RBP12.99□□□□□ -0.33
DDX56-208ENST00000467318 EXOSC4Q9NPD3 245 aaKnown RBP12.99□□□□□ -0.33
DDX56-208ENST00000467318 ITGB1BP2Q9UKP3 347 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 FKBP7Q9Y680 259 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 TMEM129A0AVI4 362 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 PRR23D1E9PI22 279 aaPredicted RBP12.99□□□□□ -0.33
DDX56-208ENST00000467318 ZNF670-ZNF695F2Z2N8 137 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 H7C1C5 153 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 TBX1O43435 398 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 ZG16O60844 167 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 PRR23D2P0DMB1 279 aaPredicted RBP12.99□□□□□ -0.33
DDX56-208ENST00000467318 LCN6P62502 163 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 TGFBR3Q03167 851 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 PHYHD1Q5SRE7 291 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 ZNF474Q6S9Z5 364 aaPredicted RBP12.99□□□□□ -0.33
DDX56-208ENST00000467318 CADM3Q8N126 398 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 CYB561A3Q8NBI2 242 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 OR52I1Q8NGK6 324 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 OR2T4Q8NH00 348 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 LRRC46Q96FV0 321 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 ZNF582Q96NG8 517 aaPredicted RBP12.99□□□□□ -0.33
DDX56-208ENST00000467318 SLC30A2Q9BRI3 323 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 GPR35Q9HC97 309 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 RPRD1BQ9NQG5 326 aaKnown RBP12.99□□□□□ -0.33
DDX56-208ENST00000467318 ELOVL5Q9NYP7 299 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 TAS2R16Q9NYV7 291 aa12.99□□□□□ -0.33
DDX56-208ENST00000467318 DHHO43323 396 aa12.98□□□□□ -0.33
DDX56-208ENST00000467318 PRKYO43930 277 aa12.98□□□□□ -0.33
DDX56-208ENST00000467318 IL1AP01583 271 aa12.98□□□□□ -0.33
DDX56-208ENST00000467318 CPEP16870 476 aa12.98□□□□□ -0.33
DDX56-208ENST00000467318 GUCA1AP43080 201 aaPredicted RBP12.98□□□□□ -0.33
DDX56-208ENST00000467318 CRYBB2P43320 205 aa12.98□□□□□ -0.33
DDX56-208ENST00000467318 ASCL1P50553 236 aa12.98□□□□□ -0.33
DDX56-208ENST00000467318 ZNF84P51523 738 aa12.98□□□□□ -0.33
DDX56-208ENST00000467318 SLC25A1P53007 311 aa12.98□□□□□ -0.33
DDX56-208ENST00000467318 LGALS3BPQ08380 585 aa12.98□□□□□ -0.33
DDX56-208ENST00000467318 FBXL19-AS1Q494R0 122 aa12.98□□□□□ -0.33
DDX56-208ENST00000467318 SLC25A47Q6Q0C1 308 aa12.98□□□□□ -0.33
DDX56-208ENST00000467318 SETD6Q8TBK2 473 aa12.98□□□□□ -0.33
DDX56-208ENST00000467318 ITLN2Q8WWU7 325 aaPredicted RBP12.98□□□□□ -0.33
DDX56-208ENST00000467318 PTP4A1Q93096 173 aa12.98□□□□□ -0.33
DDX56-208ENST00000467318 RBM24Q9BX46 236 aaKnown RBP12.98□□□□□ -0.33
DDX56-208ENST00000467318 HDHD5Q9BXW7 423 aa12.98□□□□□ -0.33
DDX56-208ENST00000467318 NMNAT2Q9BZQ4 307 aa12.98□□□□□ -0.33
DDX56-208ENST00000467318 KCNJ16Q9NPI9 418 aa12.98□□□□□ -0.33
DDX56-208ENST00000467318 GPR52Q9Y2T5 361 aa12.98□□□□□ -0.33
DDX56-208ENST00000467318 WIPF3A6NGB9 483 aa12.97□□□□□ -0.33
DDX56-208ENST00000467318 SLC16A7O60669 478 aa12.97□□□□□ -0.33
DDX56-208ENST00000467318 KHDRBS3O75525 346 aaKnown RBP12.97□□□□□ -0.33
DDX56-208ENST00000467318 CLDN14O95500 239 aa12.97□□□□□ -0.33
DDX56-208ENST00000467318 CTLA4P16410 223 aa12.97□□□□□ -0.33
DDX56-208ENST00000467318 COX5AP20674 150 aa12.97□□□□□ -0.33
DDX56-208ENST00000467318 CENPAP49450 140 aa12.97□□□□□ -0.33
DDX56-208ENST00000467318 WNT4P56705 351 aa12.97□□□□□ -0.33
DDX56-208ENST00000467318 FMODQ06828 376 aa12.97□□□□□ -0.33
DDX56-208ENST00000467318 CEACAM16Q2WEN9 425 aa12.97□□□□□ -0.33
DDX56-208ENST00000467318 NRN1LQ496H8 165 aa12.97□□□□□ -0.33
DDX56-208ENST00000467318 STEAP3Q658P3 488 aa12.97□□□□□ -0.33
DDX56-208ENST00000467318 LINGO2Q7L985 606 aa12.97□□□□□ -0.33
DDX56-208ENST00000467318 CXXC5Q7LFL8 322 aaKnown RBP12.97□□□□□ -0.33
DDX56-208ENST00000467318 CPOQ8IVL8 374 aa12.97□□□□□ -0.33
DDX56-208ENST00000467318 OR6V1Q8N148 313 aa12.97□□□□□ -0.33
DDX56-208ENST00000467318 CHAC2Q8WUX2 184 aa12.97□□□□□ -0.33
DDX56-208ENST00000467318 ITFG2Q969R8 447 aa12.97□□□□□ -0.33
DDX56-208ENST00000467318 WDFY2Q96P53 400 aa12.97□□□□□ -0.33
DDX56-208ENST00000467318 SMURF1Q9HCE7 757 aa12.97□□□□□ -0.33
DDX56-208ENST00000467318 SRA1Q9HD15 236 aaKnown RBP12.97□□□□□ -0.33
DDX56-208ENST00000467318 HINT3Q9NQE9 182 aaKnown RBP12.97□□□□□ -0.33
DDX56-208ENST00000467318 B9D1Q9UPM9 204 aa12.97□□□□□ -0.33
DDX56-208ENST00000467318 FLNCQ14315 2725 aa12.96□□□□□ -0.33
DDX56-208ENST00000467318 IQCMA0A1B0GVH7 501 aa12.96□□□□□ -0.33
DDX56-208ENST00000467318 FAM183AA6NL82 134 aa12.96□□□□□ -0.33
DDX56-208ENST00000467318 AGFG2O95081 481 aa12.96□□□□□ -0.33
DDX56-208ENST00000467318 PSMB1P20618 241 aaKnown RBP12.96□□□□□ -0.33
DDX56-208ENST00000467318 IGHV1-2P23083 117 aa12.96□□□□□ -0.33
DDX56-208ENST00000467318 BLVRAP53004 296 aa12.96□□□□□ -0.33
DDX56-208ENST00000467318 GLO1Q04760 184 aa12.96□□□□□ -0.33
DDX56-208ENST00000467318 TPBGQ13641 420 aa12.96□□□□□ -0.33
DDX56-208ENST00000467318 SFRP5Q5T4F7 317 aa12.96□□□□□ -0.33
DDX56-208ENST00000467318 NXNL2Q5VZ03 156 aa12.96□□□□□ -0.33
DDX56-208ENST00000467318 OR7E24Q6IFN5 339 aa12.96□□□□□ -0.33
DDX56-208ENST00000467318 PLBD1Q6P4A8 553 aa12.96□□□□□ -0.33
DDX56-208ENST00000467318 ZNF627Q7L945 461 aa12.96□□□□□ -0.33
DDX56-208ENST00000467318 OTULINQ96BN8 352 aa12.96□□□□□ -0.33
DDX56-208ENST00000467318 BOD1Q96IK1 185 aa12.96□□□□□ -0.33
DDX56-208ENST00000467318 TSSK2Q96PF2 358 aa12.96□□□□□ -0.33
DDX56-208ENST00000467318 COQ7Q99807 217 aa12.96□□□□□ -0.33
DDX56-208ENST00000467318 USB1Q9BQ65 265 aaKnown RBP12.96□□□□□ -0.33
DDX56-208ENST00000467318 MED18Q9BUE0 208 aa12.96□□□□□ -0.33
DDX56-208ENST00000467318 RNF167Q9H6Y7 350 aa12.96□□□□□ -0.33
DDX56-208ENST00000467318 H2AFY2Q9P0M6 372 aaPredicted RBP12.96□□□□□ -0.33
DDX56-208ENST00000467318 CLEC2DQ9UHP7 191 aa12.96□□□□□ -0.33
DDX56-208ENST00000467318 MOKQ9UQ07 419 aa12.96□□□□□ -0.33
DDX56-208ENST00000467318 GSTK1Q9Y2Q3 226 aa12.96□□□□□ -0.33
DDX56-208ENST00000467318 MYO18BQ8IUG5 2567 aa12.96□□□□□ -0.34
DDX56-208ENST00000467318 IGKV1D-43A0A0B4J1Z2 117 aa12.96□□□□□ -0.34
DDX56-208ENST00000467318 DCTN6O00399 190 aa12.96□□□□□ -0.34
DDX56-208ENST00000467318 ITGA5P08648 1049 aa12.96□□□□□ -0.34
DDX56-208ENST00000467318 ADRA2AP08913 450 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms