RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 MDKP21741 143 aaPredicted RBP4.61□□□□□ -1.67
PTCD3-207ENST00000467273 MPGP29372 298 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 MC5RP33032 325 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 GABRA3P34903 492 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 RBMXP38159 391 aaKnown RBP4.61□□□□□ -1.67
PTCD3-207ENST00000467273 MAP3K8P41279 467 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 ELK3P41970 407 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 FNTAP49354 379 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 ZNF84P51523 738 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 P2RX1P51575 399 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 PSMD7P51665 324 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 MVDP53602 400 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 HOXA4Q00056 320 aaPredicted RBP4.61□□□□□ -1.67
PTCD3-207ENST00000467273 NAAAQ02083 359 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 BAMBIQ13145 260 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 ALKBH1Q13686 389 aaKnown RBP4.61□□□□□ -1.67
PTCD3-207ENST00000467273 LARS2Q15031 903 aaKnown RBP4.61□□□□□ -1.67
PTCD3-207ENST00000467273 ELFN2Q5R3F8 820 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 TTC27Q6P3X3 843 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 CCDC137Q6PK04 289 aaKnown RBP4.61□□□□□ -1.67
PTCD3-207ENST00000467273 SYT10Q6XYQ8 523 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 ZNF573Q86YE8 665 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 KLHL7Q8IXQ5 586 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 SIGLECL1Q8N7X8 197 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 CDRT4Q8N9R6 151 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 SLC24A4Q8NFF2 622 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 MAGEE2Q8TD90 523 aaPredicted RBP4.61□□□□□ -1.67
PTCD3-207ENST00000467273 CKAP2Q8WWK9 683 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 DPF1Q92782 380 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 SLC35B4Q969S0 331 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 MAGOHBQ96A72 148 aaKnown RBP4.61□□□□□ -1.67
PTCD3-207ENST00000467273 SAT2Q96F10 170 aaPredicted RBP4.61□□□□□ -1.67
PTCD3-207ENST00000467273 C5orf30Q96GV9 206 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 RBBP8Q99708 897 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 RBM4BQ9BQ04 359 aaKnown RBP4.61□□□□□ -1.67
PTCD3-207ENST00000467273 ABHD14AQ9BUJ0 271 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 DUSP26Q9BV47 211 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 SF3B5Q9BWJ5 86 aaKnown RBP4.61□□□□□ -1.67
PTCD3-207ENST00000467273 C1QTNF6Q9BXI9 259 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 ZNF350Q9GZX5 532 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 HOXD1Q9GZZ0 328 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 VCX2Q9H322 139 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 ELOVL6Q9H5J4 265 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 ZNF385DQ9H6B1 395 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 ZNF665Q9H7R5 613 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 EVA1AQ9H8M9 152 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 TREM1Q9NP99 234 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 LZTFL1Q9NQ48 299 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 PLEK2Q9NYT0 353 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 TREM2Q9NZC2 230 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 TXNDC16Q9P2K2 825 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 UPB1Q9UBR1 384 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 NUP50Q9UKX7 468 aa4.61□□□□□ -1.67
PTCD3-207ENST00000467273 HTR3EA5X5Y0 456 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 C5orf63A6NC05 138 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 A8MZ25 164 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 C9JVG2 144 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 H3BNH8 94 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 CCDC188H7C350 402 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 M0R233 179 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 PLPP2O43688 288 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 NME6O75414 186 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-207ENST00000467273 NDUFA7O95182 113 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 PMS2P2O95744 297 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 NUDT14O95848 222 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 LGI1O95970 557 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 IGKV1D-16P01601 117 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 IGKV3-15P01624 115 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 IGHV3-9P01782 118 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 IGFBP1P08833 259 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-207ENST00000467273 ADRA2AP08913 450 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 GFAPP14136 432 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 MYF6P23409 242 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 CRABP2P29373 138 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 SOAT1P35610 550 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 ARL1P40616 181 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-207ENST00000467273 MTNR1AP48039 350 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 POU3F4P49335 361 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 CCNG1P51959 295 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 TSPAN5P62079 268 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 SNTB2Q13425 540 aaKnown RBP4.6□□□□□ -1.67
PTCD3-207ENST00000467273 KPNB1Q14974 876 aaKnown RBP4.6□□□□□ -1.67
PTCD3-207ENST00000467273 TAF9Q16594 264 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 FAM83EQ2M2I3 478 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 SPIN4Q56A73 249 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 SGO1Q5FBB7 561 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 ZNF311Q5JNZ3 666 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 THOC7Q6I9Y2 204 aaKnown RBP4.6□□□□□ -1.67
PTCD3-207ENST00000467273 LEG1Q6P5S2 330 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 TMPPEQ6ZT21 453 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 CYS1Q717R9 158 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 RNF144BQ7Z419 303 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 SPATA21Q7Z572 469 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 GOLGA7Q7Z5G4 137 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 ANKFN1Q8N957 763 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 ADPRHL1Q8NDY3 354 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 OR52J3Q8NH60 311 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 GPR151Q8TDV0 419 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 LRRC8CQ8TDW0 803 aa4.6□□□□□ -1.67
PTCD3-207ENST00000467273 C2CD4CQ8TF44 421 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms