RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 FITM2Q8N6M3 262 aa10.17□□□□□ -0.78
UBR4-211ENST00000467272 OR10S1Q8NGN2 331 aa10.17□□□□□ -0.78
UBR4-211ENST00000467272 ITLN1Q8WWA0 313 aa10.17□□□□□ -0.78
UBR4-211ENST00000467272 TAMM41Q96BW9 452 aa10.17□□□□□ -0.78
UBR4-211ENST00000467272 HAVCR1Q96D42 359 aa10.17□□□□□ -0.78
UBR4-211ENST00000467272 SPDL1Q96EA4 605 aa10.17□□□□□ -0.78
UBR4-211ENST00000467272 THOC1Q96FV9 657 aaKnown RBP10.17□□□□□ -0.78
UBR4-211ENST00000467272 SSBP3Q9BWW4 388 aaPredicted RBP10.17□□□□□ -0.78
UBR4-211ENST00000467272 CHIAQ9BZP6 476 aa10.17□□□□□ -0.78
UBR4-211ENST00000467272 TXNIPQ9H3M7 391 aa10.17□□□□□ -0.78
UBR4-211ENST00000467272 ELOVL3Q9HB03 270 aa10.17□□□□□ -0.78
UBR4-211ENST00000467272 KCNK9Q9NPC2 374 aa10.17□□□□□ -0.78
UBR4-211ENST00000467272 INIPQ9NRY2 104 aa10.17□□□□□ -0.78
UBR4-211ENST00000467272 C20orf141Q9NUB4 165 aa10.17□□□□□ -0.78
UBR4-211ENST00000467272 CORO2BQ9UQ03 480 aa10.17□□□□□ -0.78
UBR4-211ENST00000467272 PPP1R3CQ9UQK1 317 aa10.17□□□□□ -0.78
UBR4-211ENST00000467272 COL7A1Q02388 2944 aa10.17□□□□□ -0.78
UBR4-211ENST00000467272 TRAV40A0A0B4J280 105 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 OPN1SWP03999 348 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 HIST1H2ABP04908 130 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 FUT1P19526 365 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 PCGF2P35227 344 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 RBM34P42696 430 aaKnown RBP10.16□□□□□ -0.78
UBR4-211ENST00000467272 GZMMP51124 257 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 SGCAQ16586 387 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 ZNF181Q2M3W8 571 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 BRD3OSQ6XYD6 125 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 HIST3H2AQ7L7L0 130 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 NKAIN4Q8IVV8 208 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 CLDN22Q8N7P3 220 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 LRRC75AQ8NAA5 344 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 NPEPL1Q8NDH3 523 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 OR2Z1Q8NG97 314 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 PFN4Q8NHR9 129 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 VANGL1Q8TAA9 524 aaPredicted RBP10.16□□□□□ -0.78
UBR4-211ENST00000467272 LRRC8CQ8TDW0 803 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 HIST1H2ACQ93077 130 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 OR2V2Q96R30 315 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 ALG12Q9BV10 488 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 KCNN2Q9H2S1 579 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 NANOGQ9H9S0 305 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 STX18Q9P2W9 335 aaKnown RBP10.16□□□□□ -0.78
UBR4-211ENST00000467272 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.16□□□□□ -0.78
UBR4-211ENST00000467272 SLC13A4Q9UKG4 626 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 ANGPT4Q9Y264 503 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 HIF3AQ9Y2N7 669 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 POMT1Q9Y6A1 747 aa10.16□□□□□ -0.78
UBR4-211ENST00000467272 TMEM120BA0PK00 339 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 IFNL4K9M1U5 179 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 TNFRSF13BO14836 293 aaPredicted RBP10.15□□□□□ -0.78
UBR4-211ENST00000467272 TIMM23O14925 209 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 TIMM8AO60220 97 aaPredicted RBP10.15□□□□□ -0.78
UBR4-211ENST00000467272 TGDSO95455 350 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 MELTFP08582 738 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 MMP9P14780 707 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 PMELP40967 661 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 ARHGDIAP52565 204 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 PCBD1P61457 104 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 SELPLGQ14242 412 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 LAPTM4AQ15012 233 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 TAF11Q15544 211 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 ZNF404Q494X3 552 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 KPRPQ5T749 579 aaPredicted RBP10.15□□□□□ -0.78
UBR4-211ENST00000467272 FIP1L1Q6UN15 594 aaKnown RBP10.15□□□□□ -0.78
UBR4-211ENST00000467272 BTNL3Q6UXE8 466 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 C17orf107Q6ZR85 190 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 ALDH16A1Q8IZ83 802 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 DPP10Q8N608 796 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 C11orf65Q8NCR3 313 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 LINC01006Q8NI28 216 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 TMEM255BQ8WV15 326 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 NSMAFQ92636 917 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 CMBLQ96DG6 245 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 PAIP2Q9BPZ3 127 aaKnown RBP10.15□□□□□ -0.78
UBR4-211ENST00000467272 TMEM246Q9BRR3 403 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 WACQ9BTA9 647 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 KAT8Q9H7Z6 458 aaKnown RBP10.15□□□□□ -0.78
UBR4-211ENST00000467272 MIOXQ9UGB7 285 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 STARD10Q9Y365 291 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 USH1CQ9Y6N9 552 aa10.15□□□□□ -0.78
UBR4-211ENST00000467272 DNAH9Q9NYC9 4486 aa10.15□□□□□ -0.79
UBR4-211ENST00000467272 GMNCA6NCL1 334 aa10.14□□□□□ -0.79
UBR4-211ENST00000467272 SLC22A31A6NKX4 558 aa10.14□□□□□ -0.79
UBR4-211ENST00000467272 C22orf46C9J442 243 aa10.14□□□□□ -0.79
UBR4-211ENST00000467272 MCIDASD6RGH6 385 aa10.14□□□□□ -0.79
UBR4-211ENST00000467272 UMPSP11172 480 aa10.14□□□□□ -0.79
UBR4-211ENST00000467272 GSTM3P21266 225 aa10.14□□□□□ -0.79
UBR4-211ENST00000467272 TNFSF4P23510 183 aa10.14□□□□□ -0.79
UBR4-211ENST00000467272 PSMB10P40306 273 aa10.14□□□□□ -0.79
UBR4-211ENST00000467272 HLXQ14774 488 aaPredicted RBP10.14□□□□□ -0.79
UBR4-211ENST00000467272 BRICD5Q6PL45 260 aa10.14□□□□□ -0.79
UBR4-211ENST00000467272 FBXW12Q6X9E4 464 aa10.14□□□□□ -0.79
UBR4-211ENST00000467272 CCDC80Q76M96 950 aa10.14□□□□□ -0.79
UBR4-211ENST00000467272 ANKRD42Q8N9B4 389 aa10.14□□□□□ -0.79
UBR4-211ENST00000467272 SGTBQ96EQ0 304 aa10.14□□□□□ -0.79
UBR4-211ENST00000467272 CCT8L2Q96SF2 557 aa10.14□□□□□ -0.79
UBR4-211ENST00000467272 CDADC1Q9BWV3 514 aa10.14□□□□□ -0.79
UBR4-211ENST00000467272 MARCH7Q9H992 704 aa10.14□□□□□ -0.79
UBR4-211ENST00000467272 POLE4Q9NR33 117 aa10.14□□□□□ -0.79
UBR4-211ENST00000467272 CCDC167Q9P0B6 97 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms