RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 MOSPD2Q8NHP6 518 aa6□□□□□ -1.45
SND1-205ENST00000467238 SYNPRQ8TBG9 265 aa6□□□□□ -1.45
SND1-205ENST00000467238 SNX33Q8WV41 574 aa6□□□□□ -1.45
SND1-205ENST00000467238 TMEM239Q8WW34 195 aa6□□□□□ -1.45
SND1-205ENST00000467238 C11orf40Q8WZ69 217 aa6□□□□□ -1.45
SND1-205ENST00000467238 HDAC2Q92769 488 aaKnown RBP6□□□□□ -1.45
SND1-205ENST00000467238 NABP1Q96AH0 204 aa6□□□□□ -1.45
SND1-205ENST00000467238 TMEM186Q96B77 213 aa6□□□□□ -1.45
SND1-205ENST00000467238 ZNF583Q96ND8 569 aa6□□□□□ -1.45
SND1-205ENST00000467238 TSPAN32Q96QS1 320 aa6□□□□□ -1.45
SND1-205ENST00000467238 ECSITQ9BQ95 431 aa6□□□□□ -1.45
SND1-205ENST00000467238 ZNF416Q9BWM5 594 aa6□□□□□ -1.45
SND1-205ENST00000467238 TMEM120AQ9BXJ8 343 aa6□□□□□ -1.45
SND1-205ENST00000467238 LRMDAQ9H2I8 198 aa6□□□□□ -1.45
SND1-205ENST00000467238 TXNIPQ9H3M7 391 aa6□□□□□ -1.45
SND1-205ENST00000467238 SIAEQ9HAT2 523 aa6□□□□□ -1.45
SND1-205ENST00000467238 SMURF2Q9HAU4 748 aa6□□□□□ -1.45
SND1-205ENST00000467238 HINT3Q9NQE9 182 aaKnown RBP6□□□□□ -1.45
SND1-205ENST00000467238 INIPQ9NRY2 104 aa6□□□□□ -1.45
SND1-205ENST00000467238 MRGBPQ9NV56 204 aa6□□□□□ -1.45
SND1-205ENST00000467238 HIF1ANQ9NWT6 349 aa6□□□□□ -1.45
SND1-205ENST00000467238 SLCO1C1Q9NYB5 712 aa6□□□□□ -1.45
SND1-205ENST00000467238 NKIRAS2Q9NYR9 191 aa6□□□□□ -1.45
SND1-205ENST00000467238 STX18Q9P2W9 335 aaKnown RBP6□□□□□ -1.45
SND1-205ENST00000467238 RIMS3Q9UJD0 308 aa6□□□□□ -1.45
SND1-205ENST00000467238 MED31Q9Y3C7 131 aa6□□□□□ -1.45
SND1-205ENST00000467238 UGT2A1Q9Y4X1 527 aa6□□□□□ -1.45
SND1-205ENST00000467238 CAPN7Q9Y6W3 813 aa6□□□□□ -1.45
SND1-205ENST00000467238 NOTCH3Q9UM47 2321 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 IQCMA0A1B0GVH7 501 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 BBIP1A8MTZ0 92 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 FAM220BPB1ANY3 271 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 MRASO14807 208 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 PIP5K1CO60331 668 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 CDC14BO60729 498 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 FAM107AO95990 144 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 IGHV3-13P01766 116 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 IGHMP01871 453 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 MSMBP08118 114 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 NR2C1P13056 603 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 ZNF32P17041 273 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 ITGA2P17301 1181 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 STOMP27105 288 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 CDAP32320 146 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 WNT5AP41221 380 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 CRYBB2P43320 205 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 CCL8P80075 99 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 MRPS34P82930 218 aaKnown RBP5.99□□□□□ -1.45
SND1-205ENST00000467238 HSF2Q03933 536 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 FMODQ06828 376 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 CD47Q08722 323 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 ST3GAL3Q11203 375 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 KLF10Q13118 480 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 TAF11Q15544 211 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 PCGF3Q3KNV8 242 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 LRRC23Q53EV4 343 aaPredicted RBP5.99□□□□□ -1.45
SND1-205ENST00000467238 CYBRD1Q53TN4 286 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 ALG10Q5BKT4 473 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 PABPC1L2AQ5JQF8 200 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 TMEM255AQ5JRV8 349 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 CGB2Q6NT52 195 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 TMEM154Q6P9G4 183 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 SLC25A47Q6Q0C1 308 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 ZNF101Q8IZC7 436 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 ICA1LQ8NDH6 482 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 CPEB3Q8NE35 698 aaKnown RBP5.99□□□□□ -1.45
SND1-205ENST00000467238 OR51F2Q8NH61 342 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 C10orf82Q8WW14 230 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 GTF3AQ92664 365 aaKnown RBP5.99□□□□□ -1.45
SND1-205ENST00000467238 POM121L2Q96KW2 1035 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 PRRC1Q96M27 445 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 ALG12Q9BV10 488 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 KCNN2Q9H2S1 579 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 LPAR2Q9HBW0 351 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 SAR1AQ9NR31 198 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 TREM2Q9NZC2 230 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 GPR160Q9UJ42 338 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 A4GNTQ9UNA3 340 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 GRIP1Q9Y3R0 1128 aa5.99□□□□□ -1.45
SND1-205ENST00000467238 VWFP04275 2813 aa5.98□□□□□ -1.45
SND1-205ENST00000467238 LOC100509620A0A075B734 347 aa5.98□□□□□ -1.45
SND1-205ENST00000467238 A0A0A6YYJ9 748 aa5.98□□□□□ -1.45
SND1-205ENST00000467238 LOC100653049A0A140TA62 436 aa5.98□□□□□ -1.45
SND1-205ENST00000467238 HTR3EA5X5Y0 456 aa5.98□□□□□ -1.45
SND1-205ENST00000467238 GMNCA6NCL1 334 aa5.98□□□□□ -1.45
SND1-205ENST00000467238 KRT34O76011 436 aa5.98□□□□□ -1.45
SND1-205ENST00000467238 IFNA14P01570 189 aa5.98□□□□□ -1.45
SND1-205ENST00000467238 TROVE2P10155 538 aaKnown RBP eCLIP5.98□□□□□ -1.45
SND1-205ENST00000467238 IFI30P13284 250 aa5.98□□□□□ -1.45
SND1-205ENST00000467238 CCNOP22674 350 aa5.98□□□□□ -1.45
SND1-205ENST00000467238 KDELR2P33947 212 aa5.98□□□□□ -1.45
SND1-205ENST00000467238 ARFIP2P53365 341 aa5.98□□□□□ -1.45
SND1-205ENST00000467238 RPL27P61353 136 aaKnown RBP5.98□□□□□ -1.45
SND1-205ENST00000467238 ERVK-25P63136 954 aa5.98□□□□□ -1.45
SND1-205ENST00000467238 PSG4Q00888 419 aa5.98□□□□□ -1.45
SND1-205ENST00000467238 GLO1Q04760 184 aa5.98□□□□□ -1.45
SND1-205ENST00000467238 TOP3AQ13472 1001 aaPredicted RBP5.98□□□□□ -1.45
SND1-205ENST00000467238 FHL1Q13642 323 aa5.98□□□□□ -1.45
SND1-205ENST00000467238 MAPRE2Q15555 327 aa5.98□□□□□ -1.45
SND1-205ENST00000467238 MOGQ16653 247 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms