RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 A0A1W2PPV4 95 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 A0A1W2PRD5 423 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 TMEM120BA0PK00 339 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 GJE1A6NN92 205 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 LYRM9A8MSI8 78 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 SCAMP2O15127 329 aaKnown RBP1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 HSBP1O75506 76 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 SCELO95171 688 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 SNAI1O95863 264 aaPredicted RBP1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 TRBC1P01850 177 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 UBTFL6P0CB48 400 aaPredicted RBP1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 GKN3PP0CG01 181 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 DUX4L2P0CJ85 424 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 DUX4L3P0CJ86 424 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 DUX4L5P0CJ88 424 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 DUX4L6P0CJ89 424 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 DUX4L7P0CJ90 424 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 CALM1P0DP23 149 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 CALM2P0DP24 149 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 CALM3P0DP25 149 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 ICAM2P13598 275 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 HPGDP15428 266 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 PMCHP20382 165 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 PTNP21246 168 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 GABRR2P28476 465 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 SERPINB5P36952 375 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 PSMD4P55036 377 aaKnown RBP1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 HADHBP55084 474 aaKnown RBP1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 CLDN18P56856 261 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 STXBP1P61764 594 aaKnown RBP1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 XIAPP98170 497 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 SP4Q02446 784 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 ZNF33AQ06730 810 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 KIAA0087Q14695 138 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 TRAM2Q15035 370 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 NCF4Q15080 339 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 STK11Q15831 433 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 NRF1Q16656 503 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 PGGHGQ32M88 737 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 FBXO48Q5FWF7 155 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 KPRPQ5T749 579 aaPredicted RBP1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 MLIPQ5VWP3 458 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 STUMQ69YW2 141 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 H3F3CQ6NXT2 135 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 DUX4L9Q6RFH8 374 aaPredicted RBP1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 MBOAT1Q6ZNC8 495 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 RFLNAQ6ZTI6 216 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 FAM122BQ7Z309 247 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 PEX26Q7Z412 305 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 APRG1Q8IVJ8 170 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 ZNF547Q8IVP9 402 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 ZNF695Q8IW36 515 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 CMTM8Q8IZV2 173 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 ZADH2Q8N4Q0 377 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 PRELID2Q8N945 189 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 LRRC75AQ8NAA5 344 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 HSD17B11Q8NBQ5 300 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 INO80EQ8NBZ0 244 aaPredicted RBP1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 TMEM104Q8NE00 496 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 OR51G1Q8NGK1 321 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 OR1N2Q8NGR9 330 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 OR10R2Q8NGX6 335 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 OR2L8Q8NGY9 312 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 NUBPLQ8TB37 319 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 CA5BP1Q8WTZ4 195 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 FAM151AQ8WW52 585 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 PIH1D2Q8WWB5 315 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 RAB1CQ92928 201 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 TOP1MTQ969P6 601 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 RPUSD4Q96CM3 377 aaKnown RBP1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 LRRC39Q96DD0 335 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 C19orf60Q96EN9 201 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 PIK3IP1Q96FE7 263 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 DUS3LQ96G46 650 aaKnown RBP1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 FCRL1Q96LA6 429 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 ECSITQ9BQ95 431 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 ZYG11BQ9C0D3 744 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 OR2AG1Q9H205 316 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 DYRK4Q9NR20 520 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 AGPAT4Q9NRZ5 378 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 XCL2Q9UBD3 114 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 CLCF1Q9UBD9 225 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 DUX4Q9UBX2 424 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 MTRF1LQ9UGC7 380 aaKnown RBP1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 CFAP45Q9UL16 551 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 STK38LQ9Y2H1 464 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 BZW2Q9Y6E2 419 aaKnown RBP1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 NEURL4Q96JN8 1562 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 UBN2Q6ZU65 1347 aa1.37□□□□□ -2.19
GTF3C3-209ENST00000466862 MSH6P52701 1360 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 IGKV1D-13A0A0B4J2D9 117 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 LOC100653049A0A140TA62 436 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 ZNF726A6NNF4 738 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 H7C0C1 242 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 K7EMT4 169 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 M0QX08 132 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 SLC9A3R1O14745 358 aaPredicted RBP1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 ZBTB5O15062 677 aa1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 NVLO15381 856 aaKnown RBP1.36□□□□□ -2.19
GTF3C3-209ENST00000466862 NEMFO60524 1076 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms