RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 Q96MT0 163 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 CDADC1Q9BWV3 514 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 WDR76Q9H967 626 aa13.91□□□□□ -0.18
GPC1-207ENST00000466624 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.91□□□□□ -0.18
GPC1-207ENST00000466624 IQCMA0A1B0GVH7 501 aa13.9□□□□□ -0.18
GPC1-207ENST00000466624 DPRXA6NFQ7 191 aa13.9□□□□□ -0.18
GPC1-207ENST00000466624 ZNF593O00488 134 aaPredicted RBP13.9□□□□□ -0.18
GPC1-207ENST00000466624 CECR9P0C854 216 aa13.9□□□□□ -0.18
GPC1-207ENST00000466624 IDH3GP51553 393 aaPredicted RBP13.9□□□□□ -0.18
GPC1-207ENST00000466624 BSPH1Q075Z2 132 aa13.9□□□□□ -0.18
GPC1-207ENST00000466624 POU4F2Q12837 409 aa13.9□□□□□ -0.18
GPC1-207ENST00000466624 RAB39AQ14964 217 aa13.9□□□□□ -0.18
GPC1-207ENST00000466624 MAD2L1BPQ15013 274 aaPredicted RBP13.9□□□□□ -0.18
GPC1-207ENST00000466624 SNCBQ16143 134 aa13.9□□□□□ -0.18
GPC1-207ENST00000466624 PABPC1L2AQ5JQF8 200 aa13.9□□□□□ -0.18
GPC1-207ENST00000466624 ERI1Q8IV48 349 aaKnown RBP13.9□□□□□ -0.18
GPC1-207ENST00000466624 ZNF584Q8IVC4 421 aa13.9□□□□□ -0.18
GPC1-207ENST00000466624 C8orf59Q8N0T1 100 aaPredicted RBP13.9□□□□□ -0.18
GPC1-207ENST00000466624 OR2AJ1Q8NGZ0 328 aa13.9□□□□□ -0.18
GPC1-207ENST00000466624 RADILQ96JH8 1075 aa13.9□□□□□ -0.18
GPC1-207ENST00000466624 TMEM204Q9BSN7 226 aa13.9□□□□□ -0.18
GPC1-207ENST00000466624 C1QTNF6Q9BXI9 259 aa13.9□□□□□ -0.18
GPC1-207ENST00000466624 WNT5BQ9H1J7 359 aa13.9□□□□□ -0.18
GPC1-207ENST00000466624 RASSF1Q9NS23 344 aa13.9□□□□□ -0.18
GPC1-207ENST00000466624 CLN6Q9NWW5 311 aa13.9□□□□□ -0.18
GPC1-207ENST00000466624 DNAJC27Q9NZQ0 273 aa13.9□□□□□ -0.18
GPC1-207ENST00000466624 BAHCC1Q9P281 2608 aa13.9□□□□□ -0.18
GPC1-207ENST00000466624 CADP27708 2225 aa13.9□□□□□ -0.18
GPC1-207ENST00000466624 SGCEO43556 437 aa13.89□□□□□ -0.19
GPC1-207ENST00000466624 ENTPD6O75354 484 aa13.89□□□□□ -0.19
GPC1-207ENST00000466624 CLIC3O95833 236 aa13.89□□□□□ -0.19
GPC1-207ENST00000466624 CD3EP07766 207 aa13.89□□□□□ -0.19
GPC1-207ENST00000466624 ISL1P61371 349 aa13.89□□□□□ -0.19
GPC1-207ENST00000466624 IL5RAQ01344 420 aa13.89□□□□□ -0.19
GPC1-207ENST00000466624 NAAAQ02083 359 aa13.89□□□□□ -0.19
GPC1-207ENST00000466624 RAB35Q15286 201 aa13.89□□□□□ -0.19
GPC1-207ENST00000466624 CCDC92Q53HC0 331 aaPredicted RBP13.89□□□□□ -0.19
GPC1-207ENST00000466624 OTPQ5XKR4 325 aa13.89□□□□□ -0.19
GPC1-207ENST00000466624 SLC16A9Q7RTY1 509 aa13.89□□□□□ -0.19
GPC1-207ENST00000466624 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.89□□□□□ -0.19
GPC1-207ENST00000466624 ZNF295-AS1Q8N0V1 137 aa13.89□□□□□ -0.19
GPC1-207ENST00000466624 ZNF454Q8N9F8 522 aa13.89□□□□□ -0.19
GPC1-207ENST00000466624 CPEB3Q8NE35 698 aaKnown RBP13.89□□□□□ -0.19
GPC1-207ENST00000466624 OR1J2Q8NGS2 313 aa13.89□□□□□ -0.19
GPC1-207ENST00000466624 OR6N2Q8NGY6 317 aa13.89□□□□□ -0.19
GPC1-207ENST00000466624 APH1BQ8WW43 257 aa13.89□□□□□ -0.19
GPC1-207ENST00000466624 PIK3IP1Q96FE7 263 aa13.89□□□□□ -0.19
GPC1-207ENST00000466624 CNN2Q99439 309 aaKnown RBP13.89□□□□□ -0.19
GPC1-207ENST00000466624 MNTQ99583 582 aa13.89□□□□□ -0.19
GPC1-207ENST00000466624 YIPF3Q9GZM5 350 aa13.89□□□□□ -0.19
GPC1-207ENST00000466624 HDHD2Q9H0R4 259 aa13.89□□□□□ -0.19
GPC1-207ENST00000466624 PLEK2Q9NYT0 353 aa13.89□□□□□ -0.19
GPC1-207ENST00000466624 GDF2Q9UK05 429 aaPredicted RBP13.89□□□□□ -0.19
GPC1-207ENST00000466624 ABCA4P78363 2273 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 OR6C6A6NF89 314 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 ABCD4O14678 606 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 RER1O15258 196 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 SYNGR3O43761 229 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 DOK2O60496 412 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 SELENOFO60613 162 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 CTAG2O75638 210 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 CRYAAP02489 173 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 CELA3BP08861 270 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 SPARCP09486 303 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 PSKH1P11801 424 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 SSTR2P30874 369 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 ELFN2Q5R3F8 820 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 C6orf52Q5T4I8 152 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 ZNF774Q6NX45 483 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 CORO6Q6QEF8 472 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 B3GLCTQ6Y288 498 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 RHOUQ7L0Q8 258 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 VASH1Q7L8A9 365 aaPredicted RBP13.88□□□□□ -0.19
GPC1-207ENST00000466624 DPY19L4Q7Z388 723 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 MYPOPQ86VE0 399 aaPredicted RBP13.88□□□□□ -0.19
GPC1-207ENST00000466624 CDC20BQ86Y33 519 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 LINC00346Q8IVM7 164 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 SLC30A7Q8NEW0 376 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 AKR7LQ8NHP1 331 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 OTOSQ8NHW6 89 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 ST7LQ8TDW4 575 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 FBLIM1Q8WUP2 373 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 MARVELD3Q96A59 401 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 MS4A3Q96HJ5 214 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 COQ7Q99807 217 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 ANKRD60Q9BZ19 345 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 ADGRL4Q9HBW9 690 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 RAB26Q9ULW5 256 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 RNF115Q9Y4L5 304 aa13.88□□□□□ -0.19
GPC1-207ENST00000466624 IGHV2OR16-5A0A0B4J2B6 119 aa13.87□□□□□ -0.19
GPC1-207ENST00000466624 WBP4O75554 376 aaKnown RBP13.87□□□□□ -0.19
GPC1-207ENST00000466624 GNAO1P09471 354 aa13.87□□□□□ -0.19
GPC1-207ENST00000466624 SBK2P0C263 348 aa13.87□□□□□ -0.19
GPC1-207ENST00000466624 ZNF35P13682 527 aa13.87□□□□□ -0.19
GPC1-207ENST00000466624 STOMP27105 288 aa13.87□□□□□ -0.19
GPC1-207ENST00000466624 APLNRP35414 380 aa13.87□□□□□ -0.19
GPC1-207ENST00000466624 RPS27P42677 84 aaKnown RBP13.87□□□□□ -0.19
GPC1-207ENST00000466624 MTNR1AP48039 350 aa13.87□□□□□ -0.19
GPC1-207ENST00000466624 ECH1Q13011 328 aa13.87□□□□□ -0.19
GPC1-207ENST00000466624 TBC1D28Q2M2D7 210 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms