RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 MBOAT2Q6ZWT7 520 aa16.22■□□□□ 0.19
COL9A3-206ENST00000466532 USP43Q70EL4 1123 aa16.22■□□□□ 0.19
COL9A3-206ENST00000466532 FKBP9P1Q75LS8 142 aa16.22■□□□□ 0.19
COL9A3-206ENST00000466532 CBLL1Q75N03 491 aa16.22■□□□□ 0.19
COL9A3-206ENST00000466532 ZER1Q7Z7L7 766 aa16.22■□□□□ 0.19
COL9A3-206ENST00000466532 RP9Q8TA86 221 aaKnown RBP16.22■□□□□ 0.19
COL9A3-206ENST00000466532 HSH2DQ96JZ2 352 aa16.22■□□□□ 0.19
COL9A3-206ENST00000466532 WACQ9BTA9 647 aa16.22■□□□□ 0.19
COL9A3-206ENST00000466532 TRIM77I1YAP6 450 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 XKRYO14609 159 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 DOK2O60496 412 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 PRSS23O95084 383 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 CD14P08571 375 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 COX5BP10606 129 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 GATA3P23771 443 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 HTR5AP47898 357 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 SLC7A2P52569 658 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 LCN2P80188 198 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 TNFAIP6P98066 277 aaPredicted RBP16.21■□□□□ 0.19
COL9A3-206ENST00000466532 SCRN3Q0VDG4 424 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 PSG7Q13046 419 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 ZBED5Q49AG3 693 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 MESTQ5EB52 335 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 TMPRSS11FQ6ZWK6 438 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 RRM2BQ7LG56 351 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 NPEPL1Q8NDH3 523 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 NANPQ8TBE9 248 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 ST7LQ8TDW4 575 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 Q96M85 177 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 ZNF570Q96NI8 536 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 JMJD8Q96S16 334 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 POFUT1Q9H488 388 aa16.21■□□□□ 0.19
COL9A3-206ENST00000466532 DOCK11Q5JSL3 2073 aa16.2■□□□□ 0.18
COL9A3-206ENST00000466532 NME4O00746 187 aa16.2■□□□□ 0.18
COL9A3-206ENST00000466532 SGCEO43556 437 aa16.2■□□□□ 0.18
COL9A3-206ENST00000466532 SERPINA1P01009 418 aa16.2■□□□□ 0.18
COL9A3-206ENST00000466532 COX4I1P13073 169 aa16.2■□□□□ 0.18
COL9A3-206ENST00000466532 GSTM3P21266 225 aa16.2■□□□□ 0.18
COL9A3-206ENST00000466532 GUCY1A3Q02108 690 aa16.2■□□□□ 0.18
COL9A3-206ENST00000466532 HNRNPA0Q13151 305 aaKnown RBP16.2■□□□□ 0.18
COL9A3-206ENST00000466532 CDK5R2Q13319 367 aa16.2■□□□□ 0.18
COL9A3-206ENST00000466532 FAM122BQ7Z309 247 aa16.2■□□□□ 0.18
COL9A3-206ENST00000466532 FAM156AQ8NDB6 213 aa16.2■□□□□ 0.18
COL9A3-206ENST00000466532 FAM216AQ8WUB2 273 aa16.2■□□□□ 0.18
COL9A3-206ENST00000466532 DCLRE1CQ96SD1 692 aaKnown RBP16.2■□□□□ 0.18
COL9A3-206ENST00000466532 SUCNR1Q9BXA5 334 aa16.2■□□□□ 0.18
COL9A3-206ENST00000466532 NDEL1Q9GZM8 345 aa16.2■□□□□ 0.18
COL9A3-206ENST00000466532 C7orf69Q9H7B7 122 aa16.2■□□□□ 0.18
COL9A3-206ENST00000466532 TBCCD1Q9NVR7 557 aa16.2■□□□□ 0.18
COL9A3-206ENST00000466532 DCAF16Q9NXF7 216 aa16.2■□□□□ 0.18
COL9A3-206ENST00000466532 NPTNQ9Y639 398 aa16.2■□□□□ 0.18
COL9A3-206ENST00000466532 PRSS37A4D1T9 235 aa16.19■□□□□ 0.18
COL9A3-206ENST00000466532 AHCYL1O43865 530 aa16.19■□□□□ 0.18
COL9A3-206ENST00000466532 ZNF26P17031 533 aaPredicted RBP16.19■□□□□ 0.18
COL9A3-206ENST00000466532 TNFSF4P23510 183 aa16.19■□□□□ 0.18
COL9A3-206ENST00000466532 VASH1Q7L8A9 365 aaPredicted RBP16.19■□□□□ 0.18
COL9A3-206ENST00000466532 CYP4Z1Q86W10 505 aa16.19■□□□□ 0.18
COL9A3-206ENST00000466532 TREML1Q86YW5 311 aa16.19■□□□□ 0.18
COL9A3-206ENST00000466532 BPIFB2Q8N4F0 458 aa16.19■□□□□ 0.18
COL9A3-206ENST00000466532 GCDHQ92947 438 aaPredicted RBP16.19■□□□□ 0.18
COL9A3-206ENST00000466532 FAM162AQ96A26 154 aa16.19■□□□□ 0.18
COL9A3-206ENST00000466532 FAM46AQ96IP4 442 aaKnown RBP16.19■□□□□ 0.18
COL9A3-206ENST00000466532 SLC6A7Q99884 636 aa16.19■□□□□ 0.18
COL9A3-206ENST00000466532 HOPXQ9BPY8 73 aaPredicted RBP16.19■□□□□ 0.18
COL9A3-206ENST00000466532 RBM4Q9BWF3 364 aaKnown RBP16.19■□□□□ 0.18
COL9A3-206ENST00000466532 ANKRD19PQ9H560 264 aa16.19■□□□□ 0.18
COL9A3-206ENST00000466532 PLEK2Q9NYT0 353 aa16.19■□□□□ 0.18
COL9A3-206ENST00000466532 PURGQ9UJV8 347 aaKnown RBP16.19■□□□□ 0.18
COL9A3-206ENST00000466532 TMEM5Q9Y2B1 443 aa16.19■□□□□ 0.18
COL9A3-206ENST00000466532 TEX13CA0A0J9YWL9 993 aa16.18■□□□□ 0.18
COL9A3-206ENST00000466532 FOXH1O75593 365 aa16.18■□□□□ 0.18
COL9A3-206ENST00000466532 IGHV2-70P01814 119 aa16.18■□□□□ 0.18
COL9A3-206ENST00000466532 SBK2P0C263 348 aa16.18■□□□□ 0.18
COL9A3-206ENST00000466532 CTLA4P16410 223 aa16.18■□□□□ 0.18
COL9A3-206ENST00000466532 TUBG1P23258 451 aa16.18■□□□□ 0.18
COL9A3-206ENST00000466532 RBMXP38159 391 aaKnown RBP16.18■□□□□ 0.18
COL9A3-206ENST00000466532 GSK3BP49841 420 aa16.18■□□□□ 0.18
COL9A3-206ENST00000466532 AQP6Q13520 282 aa16.18■□□□□ 0.18
COL9A3-206ENST00000466532 KRR1Q13601 381 aaKnown RBP16.18■□□□□ 0.18
COL9A3-206ENST00000466532 OR2Z1Q8NG97 314 aa16.18■□□□□ 0.18
COL9A3-206ENST00000466532 SLC7A13Q8TCU3 470 aa16.18■□□□□ 0.18
COL9A3-206ENST00000466532 RASD2Q96D21 266 aa16.18■□□□□ 0.18
COL9A3-206ENST00000466532 RERGLQ9H628 205 aa16.18■□□□□ 0.18
COL9A3-206ENST00000466532 NMNAT1Q9HAN9 279 aaPredicted RBP16.18■□□□□ 0.18
COL9A3-206ENST00000466532 TUBG2Q9NRH3 451 aa16.18■□□□□ 0.18
COL9A3-206ENST00000466532 TMEM106BQ9NUM4 274 aa16.18■□□□□ 0.18
COL9A3-206ENST00000466532 OPN4Q9UHM6 478 aa16.18■□□□□ 0.18
COL9A3-206ENST00000466532 STARD10Q9Y365 291 aa16.18■□□□□ 0.18
COL9A3-206ENST00000466532 ENPP4Q9Y6X5 453 aa16.18■□□□□ 0.18
COL9A3-206ENST00000466532 TMEM89A2RUT3 159 aa16.17■□□□□ 0.18
COL9A3-206ENST00000466532 NDUFB2O95178 105 aa16.17■□□□□ 0.18
COL9A3-206ENST00000466532 NCK1P16333 377 aa16.17■□□□□ 0.18
COL9A3-206ENST00000466532 TNFRSF1AP19438 455 aa16.17■□□□□ 0.18
COL9A3-206ENST00000466532 KITLGP21583 273 aa16.17■□□□□ 0.18
COL9A3-206ENST00000466532 COMPP49747 757 aaPredicted RBP16.17■□□□□ 0.18
COL9A3-206ENST00000466532 OTPQ5XKR4 325 aa16.17■□□□□ 0.18
COL9A3-206ENST00000466532 C1orf94Q6P1W5 598 aa16.17■□□□□ 0.18
COL9A3-206ENST00000466532 C8orf82Q6P1X6 216 aaPredicted RBP16.17■□□□□ 0.18
COL9A3-206ENST00000466532 Q6ZR03 302 aa16.17■□□□□ 0.18
COL9A3-206ENST00000466532 TSEN54Q7Z6J9 526 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms