RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 ZNF17P17021 662 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 SRD5A2P31213 254 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 SRP9P49458 86 aaKnown RBP12.04□□□□□ -0.48
UBE4B-206ENST00000466379 STARP49675 285 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 PLA2G7Q13093 441 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 UBE2NLQ5JXB2 153 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 WIPI1Q5MNZ9 446 aaPredicted RBP12.04□□□□□ -0.48
UBE4B-206ENST00000466379 PHYHD1Q5SRE7 291 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 PYHIN1Q6K0P9 492 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 PRSS45Q7RTY3 260 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.04□□□□□ -0.48
UBE4B-206ENST00000466379 RNF133Q8WVZ7 376 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 GCDHQ92947 438 aaPredicted RBP12.04□□□□□ -0.48
UBE4B-206ENST00000466379 TRIM63Q969Q1 353 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 ZNF775Q96BV0 537 aaPredicted RBP12.04□□□□□ -0.48
UBE4B-206ENST00000466379 GPR87Q9BY21 358 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 OR52A1Q9UKL2 312 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 DHDHQ9UQ10 334 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 POLR1DQ9Y2S0 133 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 LHFPL6Q9Y693 200 aa12.04□□□□□ -0.48
UBE4B-206ENST00000466379 PCNX2A6NKB5 2137 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 TMEM269A0A1B0GVZ9 245 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 CD3GP09693 182 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 PRKAR1AP10644 381 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 CD96P40200 585 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 RFC3P40938 356 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 RAC1P63000 192 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 DGCR2P98153 550 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 DEFB124Q8NES8 71 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 HES7Q9BYE0 225 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 LRFN1Q9P244 771 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 PCDHGA1Q9Y5H4 931 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 P2RY10O00398 339 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 WDPCPO95876 746 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 RAF1P04049 648 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 ITGA3P26006 1051 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 EIF2B2P49770 351 aaKnown RBP12.03□□□□□ -0.48
UBE4B-206ENST00000466379 CREB3L2Q70SY1 520 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 ADAMTS17Q8TE56 1095 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 ASB5Q8WWX0 329 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 ADAMTS14Q8WXS8 1223 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 SIGLEC12Q96PQ1 595 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.03□□□□□ -0.48
UBE4B-206ENST00000466379 PLA2G3Q9NZ20 509 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 NLKQ9UBE8 527 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 GDF2Q9UK05 429 aaPredicted RBP12.03□□□□□ -0.48
UBE4B-206ENST00000466379 KIAA1549Q9HCM3 1950 aa12.03□□□□□ -0.48
UBE4B-206ENST00000466379 LOC102725191A0A1B0GVB3 256 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 LOC107986453A0A1B0GWG9 222 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 NPIPA2E9PIF3 369 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 NPIPA3F8WFD2 350 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 GDF1P27539 372 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 HIST3H3Q16695 136 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 DCAF10Q5QP82 559 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 AGAP6Q5VW22 663 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 ZNF544Q6NX49 715 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 LINC00696Q6ZRV3 163 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 AKAP14Q86UN6 197 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 OR9K2Q8NGE7 335 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 SFXN2Q96NB2 322 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 AGAP4Q96P64 663 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 C1orf198Q9H425 327 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 KCNK15Q9H427 330 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 AUNIPQ9H7T9 357 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 RBFOX1Q9NWB1 397 aaKnown RBP12.02□□□□□ -0.49
UBE4B-206ENST00000466379 TAS2R4Q9NYW5 299 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 ASH2LQ9UBL3 628 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 N6AMT1Q9Y5N5 214 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 SPAARA0A1B0GVQ0 90 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 STMND1H3BQB6 276 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 SMAD9O15198 467 aaKnown RBP12.02□□□□□ -0.49
UBE4B-206ENST00000466379 UBL3O95164 117 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 SELENOPP49908 381 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 SUCLG1P53597 346 aaKnown RBP12.02□□□□□ -0.49
UBE4B-206ENST00000466379 CSNK2A1P68400 391 aaPredicted RBP12.02□□□□□ -0.49
UBE4B-206ENST00000466379 ATP1A1-AS1Q5TC04 95 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 MZT2BQ6NZ67 158 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 KRT74Q7RTS7 529 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 HDDC2Q7Z4H3 204 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 GGNQ86UU5 652 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 PLPP7Q8NBV4 271 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 OR13C3Q8NGS6 347 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 OR6N1Q8NGY5 312 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 SYNPRQ8TBG9 265 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 OR2M2Q96R28 347 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 NAA11Q9BSU3 229 aaPredicted RBP12.02□□□□□ -0.49
UBE4B-206ENST00000466379 GLTPQ9NZD2 209 aa12.02□□□□□ -0.49
UBE4B-206ENST00000466379 A0A0B4J293 547 aa12.01□□□□□ -0.49
UBE4B-206ENST00000466379 FAM240BA0A1B0GVZ2 78 aa12.01□□□□□ -0.49
UBE4B-206ENST00000466379 MEIOCA2RUB1 952 aa12.01□□□□□ -0.49
UBE4B-206ENST00000466379 RER1O15258 196 aa12.01□□□□□ -0.49
UBE4B-206ENST00000466379 GPR37O15354 613 aa12.01□□□□□ -0.49
UBE4B-206ENST00000466379 EIF1BO60739 113 aaKnown RBP12.01□□□□□ -0.49
UBE4B-206ENST00000466379 NEURL1O76050 574 aa12.01□□□□□ -0.49
UBE4B-206ENST00000466379 FAM157BP0CG42 384 aa12.01□□□□□ -0.49
UBE4B-206ENST00000466379 TMIGD3P0DMS9 266 aaPredicted RBP12.01□□□□□ -0.49
UBE4B-206ENST00000466379 PTHLHP12272 177 aa12.01□□□□□ -0.49
UBE4B-206ENST00000466379 CSNK1A1P48729 337 aa12.01□□□□□ -0.49
UBE4B-206ENST00000466379 GPR176Q14439 515 aa12.01□□□□□ -0.49
UBE4B-206ENST00000466379 TGIF1Q15583 401 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms