RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 ARMCX1Q9P291 453 aa17.35■□□□□ 0.37
COL6A1-203ENST00000466285 ZNF69Q9UC07 566 aa17.35■□□□□ 0.37
COL6A1-203ENST00000466285 PURGQ9UJV8 347 aaKnown RBP17.35■□□□□ 0.37
COL6A1-203ENST00000466285 PCDHGB1Q9Y5G3 927 aa17.35■□□□□ 0.37
COL6A1-203ENST00000466285 TIMM10BQ9Y5J6 103 aa17.35■□□□□ 0.37
COL6A1-203ENST00000466285 A0A087WUU8 490 aa17.34■□□□□ 0.37
COL6A1-203ENST00000466285 EFCAB9A8MZ26 197 aa17.34■□□□□ 0.37
COL6A1-203ENST00000466285 DOK2O60496 412 aa17.34■□□□□ 0.37
COL6A1-203ENST00000466285 ABHD16AO95870 558 aa17.34■□□□□ 0.37
COL6A1-203ENST00000466285 GPANK1O95872 356 aa17.34■□□□□ 0.37
COL6A1-203ENST00000466285 SBK2P0C263 348 aa17.34■□□□□ 0.37
COL6A1-203ENST00000466285 HTR5AP47898 357 aa17.34■□□□□ 0.37
COL6A1-203ENST00000466285 SLC9A3P48764 834 aa17.34■□□□□ 0.37
COL6A1-203ENST00000466285 SELENOWP63302 87 aa17.34■□□□□ 0.37
COL6A1-203ENST00000466285 PRKCDQ05655 676 aa17.34■□□□□ 0.37
COL6A1-203ENST00000466285 ST3GAL3Q11203 375 aa17.34■□□□□ 0.37
COL6A1-203ENST00000466285 SCGB2A2Q13296 93 aa17.34■□□□□ 0.37
COL6A1-203ENST00000466285 MOGQ16653 247 aa17.34■□□□□ 0.37
COL6A1-203ENST00000466285 VASH1Q7L8A9 365 aaPredicted RBP17.34■□□□□ 0.37
COL6A1-203ENST00000466285 FAM122BQ7Z309 247 aa17.34■□□□□ 0.37
COL6A1-203ENST00000466285 OR2Z1Q8NG97 314 aa17.34■□□□□ 0.37
COL6A1-203ENST00000466285 RASD2Q96D21 266 aa17.34■□□□□ 0.37
COL6A1-203ENST00000466285 SIKE1Q9BRV8 207 aa17.34■□□□□ 0.37
COL6A1-203ENST00000466285 EGFL7Q9UHF1 273 aa17.34■□□□□ 0.37
COL6A1-203ENST00000466285 STARD10Q9Y365 291 aa17.34■□□□□ 0.37
COL6A1-203ENST00000466285 IGHV3-64DA0A0J9YX35 117 aa17.33■□□□□ 0.36
COL6A1-203ENST00000466285 DNAJC9-AS1A6NH13 148 aa17.33■□□□□ 0.36
COL6A1-203ENST00000466285 F5H0A9 414 aaPredicted RBP17.33■□□□□ 0.36
COL6A1-203ENST00000466285 H3BSA7 217 aa17.33■□□□□ 0.36
COL6A1-203ENST00000466285 DBHP09172 617 aa17.33■□□□□ 0.36
COL6A1-203ENST00000466285 PRSS12P56730 875 aa17.33■□□□□ 0.36
COL6A1-203ENST00000466285 JAZF1Q86VZ6 243 aa17.33■□□□□ 0.36
COL6A1-203ENST00000466285 OR5AS1Q8N127 324 aa17.33■□□□□ 0.36
COL6A1-203ENST00000466285 RBP7Q96R05 134 aa17.33■□□□□ 0.36
COL6A1-203ENST00000466285 SH3GL1Q99961 368 aa17.33■□□□□ 0.36
COL6A1-203ENST00000466285 EGLN1Q9GZT9 426 aa17.33■□□□□ 0.36
COL6A1-203ENST00000466285 ZDHHC8Q9ULC8 765 aa17.33■□□□□ 0.36
COL6A1-203ENST00000466285 IGHV3OR16-10A0A075B7F0 116 aa17.32■□□□□ 0.36
COL6A1-203ENST00000466285 ELOVL7A1L3X0 281 aa17.32■□□□□ 0.36
COL6A1-203ENST00000466285 BBIP1A8MTZ0 92 aa17.32■□□□□ 0.36
COL6A1-203ENST00000466285 ZNF205O95201 554 aa17.32■□□□□ 0.36
COL6A1-203ENST00000466285 FXYD6P3P58550 94 aa17.32■□□□□ 0.36
COL6A1-203ENST00000466285 HOXA4Q00056 320 aaPredicted RBP17.32■□□□□ 0.36
COL6A1-203ENST00000466285 HLXQ14774 488 aaPredicted RBP17.32■□□□□ 0.36
COL6A1-203ENST00000466285 C1orf94Q6P1W5 598 aa17.32■□□□□ 0.36
COL6A1-203ENST00000466285 OAFQ86UD1 273 aa17.32■□□□□ 0.36
COL6A1-203ENST00000466285 ZNF283Q8N7M2 679 aa17.32■□□□□ 0.36
COL6A1-203ENST00000466285 OR10AD1Q8NGE0 317 aa17.32■□□□□ 0.36
COL6A1-203ENST00000466285 CMBLQ96DG6 245 aa17.32■□□□□ 0.36
COL6A1-203ENST00000466285 PATZ1Q9HBE1 687 aaKnown RBP17.32■□□□□ 0.36
COL6A1-203ENST00000466285 CYSLTR2Q9NS75 346 aa17.32■□□□□ 0.36
COL6A1-203ENST00000466285 IL20RAQ9UHF4 553 aa17.32■□□□□ 0.36
COL6A1-203ENST00000466285 TEX13CA0A0J9YWL9 993 aa17.31■□□□□ 0.36
COL6A1-203ENST00000466285 GMNCA6NCL1 334 aa17.31■□□□□ 0.36
COL6A1-203ENST00000466285 NME4O00746 187 aa17.31■□□□□ 0.36
COL6A1-203ENST00000466285 DYNC1I1O14576 645 aa17.31■□□□□ 0.36
COL6A1-203ENST00000466285 NR2C1P13056 603 aa17.31■□□□□ 0.36
COL6A1-203ENST00000466285 SELEP16581 610 aa17.31■□□□□ 0.36
COL6A1-203ENST00000466285 ZNF12P17014 697 aa17.31■□□□□ 0.36
COL6A1-203ENST00000466285 MMP16P51512 607 aa17.31■□□□□ 0.36
COL6A1-203ENST00000466285 BTG1P62324 171 aa17.31■□□□□ 0.36
COL6A1-203ENST00000466285 ZNF154Q13106 437 aa17.31■□□□□ 0.36
COL6A1-203ENST00000466285 TRAM2Q15035 370 aa17.31■□□□□ 0.36
COL6A1-203ENST00000466285 FAM205BPQ63HN1 556 aa17.31■□□□□ 0.36
COL6A1-203ENST00000466285 ALDH16A1Q8IZ83 802 aa17.31■□□□□ 0.36
COL6A1-203ENST00000466285 ZNF420Q8TAQ5 688 aaPredicted RBP17.31■□□□□ 0.36
COL6A1-203ENST00000466285 ST7LQ8TDW4 575 aa17.31■□□□□ 0.36
COL6A1-203ENST00000466285 FAM46AQ96IP4 442 aaKnown RBP17.31■□□□□ 0.36
COL6A1-203ENST00000466285 HSH2DQ96JZ2 352 aa17.31■□□□□ 0.36
COL6A1-203ENST00000466285 OR2V2Q96R30 315 aa17.31■□□□□ 0.36
COL6A1-203ENST00000466285 JMJD8Q96S16 334 aa17.31■□□□□ 0.36
COL6A1-203ENST00000466285 ELOVL3Q9HB03 270 aa17.31■□□□□ 0.36
COL6A1-203ENST00000466285 CGGBP1Q9UFW8 167 aaPredicted RBP17.31■□□□□ 0.36
COL6A1-203ENST00000466285 NDRG4Q9ULP0 352 aaKnown RBP17.31■□□□□ 0.36
COL6A1-203ENST00000466285 OR6C6A6NF89 314 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 A6NIZ1 184 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 C12orf71A8MTZ7 269 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 H0YL77 283 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 ATP8B1O43520 1251 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 SGCEO43556 437 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 ZNF682O95780 498 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 IFNA14P01570 189 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 IFNW1P05000 195 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 IGHV4-38-2P0DP08 117 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 KITLGP21583 273 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 GATA3P23771 443 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 LIMS1P48059 325 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 SLC6A9P48067 706 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 ARHGDIAP52565 204 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 RAP1BP61224 184 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 PCBD1P61457 104 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 RAP1AP62834 184 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 SLC3A1Q07837 685 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 CCDC92Q53HC0 331 aaPredicted RBP17.3■□□□□ 0.36
COL6A1-203ENST00000466285 ZNF730Q6ZMV8 503 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 PTCHD4Q6ZW05 846 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 MBOAT2Q6ZWT7 520 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 SLC15A3Q8IY34 581 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 TEX29Q8N6K0 151 aa17.3■□□□□ 0.36
COL6A1-203ENST00000466285 ACOT11Q8WXI4 607 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms