RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 IGHV3-15A0A0B4J1V0 119 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.24■□□□□ 0.19
COL9A3-205ENST00000466192 H0YC42 278 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 GPR171O14626 319 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 LRP3O75074 770 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 AQP8O94778 261 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 ADRB1P08588 477 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 MFAP5Q13361 173 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 RNASE12Q5GAN4 147 aaKnown RBP16.24■□□□□ 0.19
COL9A3-205ENST00000466192 UBE2NLQ5JXB2 153 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 ZNF544Q6NX49 715 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 CORO6Q6QEF8 472 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 IZUMO1Q8IYV9 350 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 IL22RA1Q8N6P7 574 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 C11orf40Q8WZ69 217 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 UCN2Q96RP3 112 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 FAM117AQ9C073 453 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 FBXL3Q9UKT7 428 aa16.24■□□□□ 0.19
COL9A3-205ENST00000466192 CNOT1A5YKK6 2376 aaKnown RBP16.23■□□□□ 0.19
COL9A3-205ENST00000466192 TRBV5-7A0A0A0MS05 114 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 TNFSF11O14788 317 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 RGS13O14921 159 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 CCNKO75909 580 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 CCR9P51686 369 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 IFITM2Q01629 132 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 FCRLAQ7L513 359 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 CMTM4Q8IZR5 234 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 OR14L1PQ8NHC6 308 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 B3GNT4Q9C0J1 378 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 NCOA6Q14686 2063 aaPredicted RBP16.23■□□□□ 0.19
COL9A3-205ENST00000466192 NEURL1O76050 574 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 UBL3O95164 117 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 RAF1P04049 648 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 ITGA3P26006 1051 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 LAP3P28838 519 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 CLDN17P56750 224 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 GABREP78334 506 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 ABHD17BQ5VST6 288 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 RSBN1Q5VWQ0 802 aaPredicted RBP16.23■□□□□ 0.19
COL9A3-205ENST00000466192 KRT74Q7RTS7 529 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 HDDC2Q7Z4H3 204 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 LRRTM1Q86UE6 522 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 ADAMTS14Q8WXS8 1223 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 ZC3HAV1LQ96H79 300 aaKnown RBP16.23■□□□□ 0.19
COL9A3-205ENST00000466192 SIGLEC12Q96PQ1 595 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 NPAP1Q9NZP6 1156 aa16.23■□□□□ 0.19
COL9A3-205ENST00000466192 A0A0B4J293 547 aa16.22■□□□□ 0.19
COL9A3-205ENST00000466192 ANXA2P2A6NMY6 339 aa16.22■□□□□ 0.19
COL9A3-205ENST00000466192 EIF1BO60739 113 aaKnown RBP16.22■□□□□ 0.19
COL9A3-205ENST00000466192 ANXA2P07355 339 aaKnown RBP16.22■□□□□ 0.19
COL9A3-205ENST00000466192 FAM157BP0CG42 384 aa16.22■□□□□ 0.19
COL9A3-205ENST00000466192 CNR1P21554 472 aa16.22■□□□□ 0.19
COL9A3-205ENST00000466192 SRP9P49458 86 aaKnown RBP16.22■□□□□ 0.19
COL9A3-205ENST00000466192 CLDN20P56880 219 aa16.22■□□□□ 0.19
COL9A3-205ENST00000466192 CSNK2A1P68400 391 aaPredicted RBP16.22■□□□□ 0.19
COL9A3-205ENST00000466192 FOXO1Q12778 655 aa16.22■□□□□ 0.19
COL9A3-205ENST00000466192 HIST3H3Q16695 136 aa16.22■□□□□ 0.19
COL9A3-205ENST00000466192 SLC25A47Q6Q0C1 308 aa16.22■□□□□ 0.19
COL9A3-205ENST00000466192 TMPRSS12Q86WS5 348 aa16.22■□□□□ 0.19
COL9A3-205ENST00000466192 DUSP18Q8NEJ0 188 aa16.22■□□□□ 0.19
COL9A3-205ENST00000466192 PRSS33Q8NF86 280 aa16.22■□□□□ 0.19
COL9A3-205ENST00000466192 MCHR2Q969V1 340 aa16.22■□□□□ 0.19
COL9A3-205ENST00000466192 SRXN1Q9BYN0 137 aa16.22■□□□□ 0.19
COL9A3-205ENST00000466192 FAM86C1Q9NVL1 165 aa16.22■□□□□ 0.19
COL9A3-205ENST00000466192 EMC9Q9Y3B6 208 aa16.22■□□□□ 0.19
COL9A3-205ENST00000466192 PTPRBP23467 1997 aa16.22■□□□□ 0.19
COL9A3-205ENST00000466192 A0A1W2PPL8 197 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 ZNF726A6NNF4 738 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 DOK2O60496 412 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 SRSF10O75494 262 aaKnown RBP16.21■□□□□ 0.19
COL9A3-205ENST00000466192 CD3GP09693 182 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 DGCR2P98153 550 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 PRSS45Q7RTY3 260 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 SERPINA12Q8IW75 414 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 CYB5R1Q9UHQ9 305 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 EIF1AYO14602 144 aaKnown RBP16.21■□□□□ 0.19
COL9A3-205ENST00000466192 TRAPPC6AO75865 159 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 ENPP1P22413 925 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 CDAP32320 146 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 NR4A2P43354 598 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 EIF1AXP47813 144 aaKnown RBP16.21■□□□□ 0.19
COL9A3-205ENST00000466192 MMP15P51511 669 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 PITPNAQ00169 270 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 AIMP2Q13155 320 aaKnown RBP16.21■□□□□ 0.19
COL9A3-205ENST00000466192 GPR176Q14439 515 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 TGIF1Q15583 401 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 WIPI1Q5MNZ9 446 aaPredicted RBP16.21■□□□□ 0.19
COL9A3-205ENST00000466192 MTFR2Q6P444 385 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 LRFN4Q6PJG9 635 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 CREB3L2Q70SY1 520 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 CATSPERDQ86XM0 798 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 OR10H5Q8NGA6 315 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 SLC25A38Q96DW6 304 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 ZNF486Q96H40 463 aaPredicted RBP16.21■□□□□ 0.19
COL9A3-205ENST00000466192 ABCG5Q9H222 651 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 ZFP64Q9NPA5 681 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 CENPMQ9NSP4 180 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 OR5V1Q9UGF6 321 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 CAMK2AQ9UQM7 478 aa16.21■□□□□ 0.19
COL9A3-205ENST00000466192 GJE1A6NN92 205 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms