RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 HSDL1Q3SXM5 330 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 DNLZQ5SXM8 178 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 FBXW12Q6X9E4 464 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 ABHD13Q7L211 337 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 BBS5Q8N3I7 341 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 PRELID2Q8N945 189 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 LINC00304Q8N9R0 145 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 OR52P1PQ8NH57 321 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 SLC7A13Q8TCU3 470 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 NRGNQ92686 78 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 CREB3L1Q96BA8 519 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 FAM3DQ96BQ1 224 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 ZNF681Q96N22 645 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 OR2A5Q96R48 311 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 PANX1Q96RD7 426 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 TMEM185BQ9H7F4 350 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 TMEM165Q9HC07 324 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 SCN1AP35498 2009 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 IGSF9BQ9UPX0 1349 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 LRRIQ3A6PVS8 624 aaPredicted RBP2.12□□□□□ -2.07
SMC4-205ENST00000465563 SIRPB1O00241 398 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 NDUFAB1O14561 156 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 EIF3HO15372 352 aaKnown RBP eCLIP2.12□□□□□ -2.07
SMC4-205ENST00000465563 EIF4E2O60573 245 aaKnown RBP2.12□□□□□ -2.07
SMC4-205ENST00000465563 KLHL41O60662 606 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 WBP4O75554 376 aaKnown RBP2.12□□□□□ -2.07
SMC4-205ENST00000465563 RAB3DO95716 219 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 ZNF24P17028 368 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 MAS1LP35410 378 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 CDKN2BP42772 138 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 ECH1Q13011 328 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 PON2Q15165 354 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 SOHLH1Q5JUK2 328 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 HES5Q5TA89 166 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 C9orf135Q5VTT2 229 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 C22orf42Q6IC83 251 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 REEP3Q6NUK4 255 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 SLC16A14Q7RTX9 510 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 OR4A4PQ8NGN8 299 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 ZNF502Q8TBZ5 544 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 COL21A1Q96P44 957 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 SERPINB12Q96P63 405 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 CHP1Q99653 195 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 SAV1Q9H4B6 383 aaPredicted RBP2.12□□□□□ -2.07
SMC4-205ENST00000465563 UBE2ZQ9H832 354 aaPredicted RBP2.12□□□□□ -2.07
SMC4-205ENST00000465563 GEMIN7Q9H840 131 aaKnown RBP2.12□□□□□ -2.07
SMC4-205ENST00000465563 ZNF160Q9HCG1 818 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 ISYNA1Q9NPH2 558 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 MTCH1Q9NZJ7 389 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 LGALS13Q9UHV8 139 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 PITPNC1Q9UKF7 332 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 GOLT1BQ9Y3E0 138 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 KCNE3Q9Y6H6 103 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 C2orf16Q68DN1 1984 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 TUBGCP6Q96RT7 1819 aa2.12□□□□□ -2.07
SMC4-205ENST00000465563 COL27A1Q8IZC6 1860 aaPredicted RBP2.11□□□□□ -2.07
SMC4-205ENST00000465563 INSRP06213 1382 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 NINLQ9Y2I6 1382 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 C7orf66A4D0T2 115 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 CTAG2O75638 210 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 AQP8O94778 261 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 H6PDO95479 791 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 SERPINE2P07093 398 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 OR5H8P0DN80 308 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 DCKP27707 260 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 SLC1A1P43005 524 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 CYB561P49447 251 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 RND2P52198 227 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 RPS15P62841 145 aaKnown RBP2.11□□□□□ -2.07
SMC4-205ENST00000465563 OR7A5Q15622 319 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 PGGHGQ32M88 737 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 SPANXN2Q5MJ10 180 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 DNAJC24Q6P3W2 148 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 CEMP1Q6PRD7 247 aaPredicted RBP2.11□□□□□ -2.07
SMC4-205ENST00000465563 SHISA6Q6ZSJ9 500 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 NTM-AS1Q6ZSK4 140 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 NCCRP1Q6ZVX7 275 aaPredicted RBP2.11□□□□□ -2.07
SMC4-205ENST00000465563 OR2A1Q8NGT9 310 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 OR5B3Q8NH48 314 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 MRGPRFQ96AM1 343 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 GALNT14Q96FL9 552 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 BMFQ96LC9 184 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 C20orf24Q9BUV8 137 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 HRASLS2Q9NWW9 162 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 RAB20Q9NX57 234 aa2.11□□□□□ -2.07
SMC4-205ENST00000465563 IGHV5-10-1A0A0J9YXX1 117 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 CIB4A0PJX0 185 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 SMCO3A2RU48 225 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 K7EMT4 169 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 AIM2O14862 343 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 SCAMP2O15127 329 aaKnown RBP2.1□□□□□ -2.07
SMC4-205ENST00000465563 NUPL2O15504 423 aaKnown RBP2.1□□□□□ -2.07
SMC4-205ENST00000465563 CDH16O75309 829 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 ENTPD5O75356 428 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 CLDN11O75508 207 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 CT45A6P0DMU7 189 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 CT45A5P0DMU8 189 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 CT45A7P0DMV0 189 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 PRPS2P11908 318 aa2.1□□□□□ -2.07
SMC4-205ENST00000465563 CCNB1P14635 433 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms