RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 SMURF2Q9HAU4 748 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 UBAP1Q9NZ09 502 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 BAG5Q9UL15 447 aa8.2□□□□□ -1.1
USP39-212ENST00000465514 CLPSL1A2RUU4 121 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 NPIPB13A6NJU9 1138 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 NPIPB4C9JG80 1138 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 FBP2O00757 339 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 PIP5K1CO60331 668 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 GPANK1O95872 356 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 NGFP01138 241 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 CST2P09228 141 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 LAP3P28838 519 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 LIPAP38571 399 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 OR1E2P47887 323 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 PPP1CBP62140 327 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 SLC3A1Q07837 685 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 HNRNPA0Q13151 305 aaKnown RBP8.19□□□□□ -1.1
USP39-212ENST00000465514 TOP3AQ13472 1001 aaPredicted RBP8.19□□□□□ -1.1
USP39-212ENST00000465514 HLXQ14774 488 aaPredicted RBP8.19□□□□□ -1.1
USP39-212ENST00000465514 SPRNQ5BIV9 151 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 TTMPQ5BVD1 217 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 RABL3Q5HYI8 236 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 SAMD5Q5TGI4 173 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 UNQ6126/PRO20091Q6UXV3 157 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 RFPL4BQ6ZWI9 263 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 CALHM3Q86XJ0 350 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 TREML1Q86YW5 311 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 C1orf174Q8IYL3 243 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 ALDH16A1Q8IZ83 802 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 CLDN22Q8N7P3 220 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 DEFB108BQ8NET1 73 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 ABHD4Q8TB40 342 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 ST7LQ8TDW4 575 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 GEMIN6Q8WXD5 167 aaKnown RBP8.19□□□□□ -1.1
USP39-212ENST00000465514 RBP7Q96R05 134 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 OR2H1Q9GZK4 316 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 MSL2Q9HCI7 577 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 NPHS2Q9NP85 383 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 CYSLTR2Q9NS75 346 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 INTS9Q9NV88 658 aaKnown RBP8.19□□□□□ -1.1
USP39-212ENST00000465514 ZDHHC8Q9ULC8 765 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 MED31Q9Y3C7 131 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 TIMM10BQ9Y5J6 103 aa8.19□□□□□ -1.1
USP39-212ENST00000465514 SOX21Q9Y651 276 aaPredicted RBP8.19□□□□□ -1.1
USP39-212ENST00000465514 MDFIC2A0A1B0GVS7 189 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 GMNCA6NCL1 334 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 ADH4P08319 380 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 SBK2P0C263 348 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 THRBP10828 461 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 NR2C1P13056 603 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 GUCA1AP43080 201 aaPredicted RBP8.18□□□□□ -1.1
USP39-212ENST00000465514 RPL27P61353 136 aaKnown RBP8.18□□□□□ -1.1
USP39-212ENST00000465514 PCBD1P61457 104 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 TNFAIP6P98066 277 aaPredicted RBP8.18□□□□□ -1.1
USP39-212ENST00000465514 TAF11Q15544 211 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 C2orf68Q2NKX9 166 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 ALG10Q5BKT4 473 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 ZNF774Q6NX45 483 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 JAZF1Q86VZ6 243 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 BPIFA2Q96DR5 249 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 C4orf45Q96LM5 186 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 MAGEB18Q96M61 343 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 DCLRE1CQ96SD1 692 aaKnown RBP8.18□□□□□ -1.1
USP39-212ENST00000465514 DIRC2Q96SL1 478 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 SH3GL1Q99961 368 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 ECSITQ9BQ95 431 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 ALG12Q9BV10 488 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 MS4A7Q9GZW8 240 aaPredicted RBP8.18□□□□□ -1.1
USP39-212ENST00000465514 ELOVL3Q9HB03 270 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 TCF7L1Q9HCS4 588 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 DCAF16Q9NXF7 216 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 C1RLQ9NZP8 487 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 CGGBP1Q9UFW8 167 aaPredicted RBP8.18□□□□□ -1.1
USP39-212ENST00000465514 HIF3AQ9Y2N7 669 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 NPTNQ9Y639 398 aa8.18□□□□□ -1.1
USP39-212ENST00000465514 PPIAL4EA0A075B759 164 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 PPIAL4CA0A0B4J2A2 164 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 A0A0G2JND7 137 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 A0A1W2PPL8 197 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 PPIAL4DF5H284 164 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 H3BSA7 217 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 FXYD1O00168 92 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 HOXA3O43365 443 aaPredicted RBP8.17□□□□□ -1.1
USP39-212ENST00000465514 TIMM8AO60220 97 aaPredicted RBP8.17□□□□□ -1.1
USP39-212ENST00000465514 ICMTO60725 284 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 FOXH1O75593 365 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 NDUFA7O95182 113 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 IFNA14P01570 189 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 IGHV2-70P01814 119 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 IGHMP01871 453 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 SCG5P05408 212 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 CRYBA1P05813 215 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 CD55P08174 381 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 PPIAL4FP0DN26 164 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 IFI30P13284 250 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 MTNR1AP48039 350 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 ARHGDIAP52565 204 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 CTXN1P60606 82 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 PSG7Q13046 419 aa8.17□□□□□ -1.1
USP39-212ENST00000465514 CDK5R2Q13319 367 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms