RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 GABARAPL3Q9BY60 117 aa17.54■□□□□ 0.4
SKA3-205ENST00000465471 GSX2Q9BZM3 304 aa17.54■□□□□ 0.4
SKA3-205ENST00000465471 CXorf56Q9H5V9 222 aa17.54■□□□□ 0.4
SKA3-205ENST00000465471 ENOPH1Q9UHY7 261 aa17.54■□□□□ 0.4
SKA3-205ENST00000465471 ATPIF1Q9UII2 106 aa17.54■□□□□ 0.4
SKA3-205ENST00000465471 VPS13CQ709C8 3753 aa17.54■□□□□ 0.4
SKA3-205ENST00000465471 OR6C6A6NF89 314 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 FAM183AA6NL82 134 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 ZAR1LA6NP61 321 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 SYNGR3O43761 229 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 GYPBP06028 91 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 CLUP10909 449 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 PCSK6P29122 969 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 EPHA2P29317 976 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 APLNRP35414 380 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 THBS4P35443 961 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 GLRXP35754 106 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 CENPAP49450 140 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 ART1P52961 327 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 EFNB3Q15768 340 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 SWI5Q1ZZU3 235 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 MST1LQ2TV78 715 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 CCDC92Q53HC0 331 aaPredicted RBP17.53■□□□□ 0.4
SKA3-205ENST00000465471 ALDH16A1Q8IZ83 802 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 PQLC1Q8N2U9 271 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 CDH20Q9HBT6 801 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 USE1Q9NZ43 259 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 CYB5R1Q9UHQ9 305 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 KCNG2Q9UJ96 466 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 SPEF1Q9Y4P9 236 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 USF3Q68DE3 2245 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 ARFGEF3Q5TH69 2177 aa17.53■□□□□ 0.4
SKA3-205ENST00000465471 ARID1AO14497 2285 aa17.52■□□□□ 0.4
SKA3-205ENST00000465471 SGCEO43556 437 aa17.52■□□□□ 0.4
SKA3-205ENST00000465471 GPRIN2O60269 458 aa17.52■□□□□ 0.4
SKA3-205ENST00000465471 DOK2O60496 412 aa17.52■□□□□ 0.4
SKA3-205ENST00000465471 SMPD2O60906 423 aa17.52■□□□□ 0.4
SKA3-205ENST00000465471 ALPLP05186 524 aa17.52■□□□□ 0.4
SKA3-205ENST00000465471 GALK2Q01415 458 aa17.52■□□□□ 0.4
SKA3-205ENST00000465471 PCK2Q16822 640 aa17.52■□□□□ 0.4
SKA3-205ENST00000465471 MSMPQ1L6U9 139 aa17.52■□□□□ 0.4
SKA3-205ENST00000465471 SLX4IPQ5VYV7 408 aa17.52■□□□□ 0.4
SKA3-205ENST00000465471 SLC18B1Q6NT16 456 aa17.52■□□□□ 0.4
SKA3-205ENST00000465471 LYPD4Q6UWN0 246 aa17.52■□□□□ 0.4
SKA3-205ENST00000465471 KRTAP1-3Q8IUG1 177 aa17.52■□□□□ 0.4
SKA3-205ENST00000465471 OR51L1Q8NGJ5 315 aa17.52■□□□□ 0.4
SKA3-205ENST00000465471 MED20Q9H944 212 aa17.52■□□□□ 0.4
SKA3-205ENST00000465471 HINT3Q9NQE9 182 aaKnown RBP17.52■□□□□ 0.4
SKA3-205ENST00000465471 NDRG4Q9ULP0 352 aaKnown RBP17.52■□□□□ 0.4
SKA3-205ENST00000465471 COMMD3-BMI1R4GMX3 469 aa17.52■□□□□ 0.4
SKA3-205ENST00000465471 ANKRD65E5RJM6 399 aa17.51■□□□□ 0.39
SKA3-205ENST00000465471 EI24O14681 340 aa17.51■□□□□ 0.39
SKA3-205ENST00000465471 RER1O15258 196 aa17.51■□□□□ 0.39
SKA3-205ENST00000465471 OR4A8P0C604 315 aa17.51■□□□□ 0.39
SKA3-205ENST00000465471 PSKH1P11801 424 aa17.51■□□□□ 0.39
SKA3-205ENST00000465471 PAICSP22234 425 aaKnown RBP17.51■□□□□ 0.39
SKA3-205ENST00000465471 SERPINF1P36955 418 aa17.51■□□□□ 0.39
SKA3-205ENST00000465471 WNT5AP41221 380 aa17.51■□□□□ 0.39
SKA3-205ENST00000465471 PTH2RP49190 550 aa17.51■□□□□ 0.39
SKA3-205ENST00000465471 GDI2P50395 445 aaKnown RBP17.51■□□□□ 0.39
SKA3-205ENST00000465471 BLVRAP53004 296 aa17.51■□□□□ 0.39
SKA3-205ENST00000465471 RPS23P62266 143 aaKnown RBP17.51■□□□□ 0.39
SKA3-205ENST00000465471 EFNB1P98172 346 aa17.51■□□□□ 0.39
SKA3-205ENST00000465471 RAB35Q15286 201 aa17.51■□□□□ 0.39
SKA3-205ENST00000465471 C12orf73Q69YU5 71 aa17.51■□□□□ 0.39
SKA3-205ENST00000465471 VHLLQ6RSH7 139 aa17.51■□□□□ 0.39
SKA3-205ENST00000465471 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.51■□□□□ 0.39
SKA3-205ENST00000465471 GJC3Q8NFK1 279 aa17.51■□□□□ 0.39
SKA3-205ENST00000465471 OR10H5Q8NGA6 315 aa17.51■□□□□ 0.39
SKA3-205ENST00000465471 TEX12Q9BXU0 123 aa17.51■□□□□ 0.39
SKA3-205ENST00000465471 MARCH7Q9H992 704 aa17.51■□□□□ 0.39
SKA3-205ENST00000465471 PLEK2Q9NYT0 353 aa17.51■□□□□ 0.39
SKA3-205ENST00000465471 ITGB1BP2Q9UKP3 347 aa17.51■□□□□ 0.39
SKA3-205ENST00000465471 POLR1DQ9Y2S0 133 aa17.51■□□□□ 0.39
SKA3-205ENST00000465471 C5orf49A4QMS7 147 aa17.5■□□□□ 0.39
SKA3-205ENST00000465471 TVP23AA6NH52 213 aa17.5■□□□□ 0.39
SKA3-205ENST00000465471 PRR23D1E9PI22 279 aaPredicted RBP17.5■□□□□ 0.39
SKA3-205ENST00000465471 HLA-DQA2P01906 255 aa17.5■□□□□ 0.39
SKA3-205ENST00000465471 PRR23D2P0DMB1 279 aaPredicted RBP17.5■□□□□ 0.39
SKA3-205ENST00000465471 SLC2A5P22732 501 aa17.5■□□□□ 0.39
SKA3-205ENST00000465471 FMO3P31513 532 aa17.5■□□□□ 0.39
SKA3-205ENST00000465471 CDKN1AP38936 164 aa17.5■□□□□ 0.39
SKA3-205ENST00000465471 ALDH3A2P51648 485 aa17.5■□□□□ 0.39
SKA3-205ENST00000465471 PLBD1Q6P4A8 553 aa17.5■□□□□ 0.39
SKA3-205ENST00000465471 CORO6Q6QEF8 472 aa17.5■□□□□ 0.39
SKA3-205ENST00000465471 CFAP77Q6ZQR2 320 aa17.5■□□□□ 0.39
SKA3-205ENST00000465471 LINC00346Q8IVM7 164 aa17.5■□□□□ 0.39
SKA3-205ENST00000465471 ZNF101Q8IZC7 436 aa17.5■□□□□ 0.39
SKA3-205ENST00000465471 STMN2Q93045 179 aa17.5■□□□□ 0.39
SKA3-205ENST00000465471 MRPL24Q96A35 216 aaKnown RBP17.5■□□□□ 0.39
SKA3-205ENST00000465471 HDHD2Q9H0R4 259 aa17.5■□□□□ 0.39
SKA3-205ENST00000465471 PLK3Q9H4B4 646 aa17.5■□□□□ 0.39
SKA3-205ENST00000465471 PNRC2Q9NPJ4 139 aaKnown RBP17.5■□□□□ 0.39
SKA3-205ENST00000465471 TVP23BQ9NYZ1 205 aa17.5■□□□□ 0.39
SKA3-205ENST00000465471 GDF2Q9UK05 429 aaPredicted RBP17.5■□□□□ 0.39
SKA3-205ENST00000465471 CELSR1Q9NYQ6 3014 aa17.5■□□□□ 0.39
SKA3-205ENST00000465471 TMEM129A0AVI4 362 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 B9A039 149 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 E9PQ18 207 aa17.49■□□□□ 0.39
SKA3-205ENST00000465471 H7C417 338 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms