RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 MOSPD3O75425 235 aa8.24□□□□□ -1.09
HPS4-208ENST00000464362 OPRM1P35372 400 aa8.24□□□□□ -1.09
HPS4-208ENST00000464362 PRSS12P56730 875 aa8.24□□□□□ -1.09
HPS4-208ENST00000464362 RPS18P62269 152 aaKnown RBP8.24□□□□□ -1.09
HPS4-208ENST00000464362 RBM39Q14498 530 aaKnown RBP8.24□□□□□ -1.09
HPS4-208ENST00000464362 TIGD3Q6B0B8 471 aa8.24□□□□□ -1.09
HPS4-208ENST00000464362 TMPRSS11FQ6ZWK6 438 aa8.24□□□□□ -1.09
HPS4-208ENST00000464362 CPEB2Q7Z5Q1 589 aaKnown RBP8.24□□□□□ -1.09
HPS4-208ENST00000464362 CMIPQ8IY22 773 aa8.24□□□□□ -1.09
HPS4-208ENST00000464362 HAVCR2Q8TDQ0 301 aa8.24□□□□□ -1.09
HPS4-208ENST00000464362 SPTSSAQ969W0 71 aa8.24□□□□□ -1.09
HPS4-208ENST00000464362 NAA11Q9BSU3 229 aaPredicted RBP8.24□□□□□ -1.09
HPS4-208ENST00000464362 PCDHGA5Q9Y5G8 931 aa8.24□□□□□ -1.09
HPS4-208ENST00000464362 ETV7Q9Y603 341 aa8.24□□□□□ -1.09
HPS4-208ENST00000464362 PUS1Q9Y606 427 aaKnown RBP eCLIP8.24□□□□□ -1.09
HPS4-208ENST00000464362 TDRD15B5MCY1 1934 aaKnown RBP8.24□□□□□ -1.09
HPS4-208ENST00000464362 PLRG1O43660 514 aaKnown RBP8.23□□□□□ -1.09
HPS4-208ENST00000464362 GNB3P16520 340 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 GPR85P60893 370 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 FAM219AQ8IW50 185 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 ETFBKMTQ8IXQ9 262 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 ZNF100Q8IYN0 542 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 BHLHE23Q8NDY6 225 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 OR10AC1Q8NH08 325 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 YIPF5Q969M3 257 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 SYT3Q9BQG1 590 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 ABHD6Q9BV23 337 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 NARFLQ9H6Q4 476 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 BIN3Q9NQY0 253 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 SLC5A6Q9Y289 635 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 MN1Q10571 1320 aaPredicted RBP8.23□□□□□ -1.09
HPS4-208ENST00000464362 A0A0D9SG52 128 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 SLC22A23A1A5C7 686 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 K7EPK0 472 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 TNFRSF10CO14798 259 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 PLPP2O43688 288 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 GIPP09681 153 aaPredicted RBP8.23□□□□□ -1.09
HPS4-208ENST00000464362 COL9A1P20849 921 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 MSX1P28360 303 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 RPS27AP62979 156 aaKnown RBP8.23□□□□□ -1.09
HPS4-208ENST00000464362 UBA52P62987 128 aaKnown RBP8.23□□□□□ -1.09
HPS4-208ENST00000464362 BDH1Q02338 343 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 H3F3CQ6NXT2 135 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.23□□□□□ -1.09
HPS4-208ENST00000464362 MDGA2Q7Z553 956 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 FJX1Q86VR8 437 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 ZNF695Q8IW36 515 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 ZNF687Q8N1G0 1237 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 SLC22A24Q8N4F4 322 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 FAM71E2Q8N5Q1 922 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 MARCH1Q8TCQ1 289 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 SCARB1Q8WTV0 552 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 PHYHIPQ92561 330 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.23□□□□□ -1.09
HPS4-208ENST00000464362 A0A087WV62 115 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 TEX51A0A1B0GUA7 166 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 SERTM1A2A2V5 107 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 SMCO3A2RU48 225 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 GUSBP08236 651 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 TBXA2RP21731 343 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 SELENOPP49908 381 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 C17orf67Q0P5P2 114 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 ETFDHQ16134 617 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 FCRL6Q6DN72 434 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 FBXW12Q6X9E4 464 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 PPP1R3BQ86XI6 285 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 RFLNBQ8N5W9 214 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 TMEM52Q8NDY8 209 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 SECTM1Q8WVN6 248 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 RRNAD1Q96FB5 475 aaKnown RBP8.23□□□□□ -1.09
HPS4-208ENST00000464362 COX14Q96I36 57 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 CDCA3Q99618 268 aaPredicted RBP8.23□□□□□ -1.09
HPS4-208ENST00000464362 FOXQ1Q9C009 403 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 FLRT3Q9NZU0 649 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 OR5V1Q9UGF6 321 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 B9D1Q9UPM9 204 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 A0A087WUJ7 227 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 SNAPC5O75971 98 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 MPZL1O95297 269 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 PMS2P2O95744 297 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 OR4E1P0C645 316 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 SLC6A1P30531 599 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 HTR5AP47898 357 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 MMP15P51511 669 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 TAS2R31P59538 309 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 MFAP5Q13361 173 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 MLC1Q15049 377 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 TSEN54Q7Z6J9 526 aaKnown RBP8.23□□□□□ -1.09
HPS4-208ENST00000464362 EID2Q8N6I1 236 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 TMEM217Q8N7C4 229 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 OR14A16Q8NHC5 309 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 STT3BQ8TCJ2 826 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 PPP1R1CQ8WVI7 109 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 SLC25A21Q9BQT8 299 aaPredicted RBP8.23□□□□□ -1.09
HPS4-208ENST00000464362 CHRNA9Q9UGM1 479 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 SRPK3Q9UPE1 567 aa8.23□□□□□ -1.09
HPS4-208ENST00000464362 BCAT2O15382 392 aaPredicted RBP8.22□□□□□ -1.09
HPS4-208ENST00000464362 IFNA5P01569 189 aa8.22□□□□□ -1.09
HPS4-208ENST00000464362 LPLP06858 475 aa8.22□□□□□ -1.09
HPS4-208ENST00000464362 ZNF44P15621 663 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms