RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 PSMD5Q16401 504 aa4.32□□□□□ -1.72
COPS3-205ENST00000463097 Q1RN00 199 aa4.32□□□□□ -1.72
COPS3-205ENST00000463097 C6orf183Q5T699 404 aa4.32□□□□□ -1.72
COPS3-205ENST00000463097 ASCL4Q6XD76 172 aa4.32□□□□□ -1.72
COPS3-205ENST00000463097 HSD17B13Q7Z5P4 300 aaPredicted RBP4.32□□□□□ -1.72
COPS3-205ENST00000463097 ZNF677Q86XU0 584 aa4.32□□□□□ -1.72
COPS3-205ENST00000463097 NKAPP1Q8N9T2 125 aa4.32□□□□□ -1.72
COPS3-205ENST00000463097 OR10H4Q8NGA5 316 aa4.32□□□□□ -1.72
COPS3-205ENST00000463097 ASZ1Q8WWH4 475 aa4.32□□□□□ -1.72
COPS3-205ENST00000463097 ISOC2Q96AB3 205 aa4.32□□□□□ -1.72
COPS3-205ENST00000463097 APH1AQ96BI3 265 aa4.32□□□□□ -1.72
COPS3-205ENST00000463097 C1orf147Q96MC9 270 aaPredicted RBP4.32□□□□□ -1.72
COPS3-205ENST00000463097 ARHGDIGQ99819 225 aa4.32□□□□□ -1.72
COPS3-205ENST00000463097 PAIP2Q9BPZ3 127 aaKnown RBP4.32□□□□□ -1.72
COPS3-205ENST00000463097 PAXXQ9BUH6 204 aa4.32□□□□□ -1.72
COPS3-205ENST00000463097 ZDHHC11Q9H8X9 412 aa4.32□□□□□ -1.72
COPS3-205ENST00000463097 ZNF702PQ9H963 129 aa4.32□□□□□ -1.72
COPS3-205ENST00000463097 ACP6Q9NPH0 428 aa4.32□□□□□ -1.72
COPS3-205ENST00000463097 AIG1Q9NVV5 245 aa4.32□□□□□ -1.72
COPS3-205ENST00000463097 ASF1AQ9Y294 204 aa4.32□□□□□ -1.72
COPS3-205ENST00000463097 YARS2Q9Y2Z4 477 aaKnown RBP4.32□□□□□ -1.72
COPS3-205ENST00000463097 KIF1BO60333 1816 aa4.32□□□□□ -1.72
COPS3-205ENST00000463097 MROH1Q8NDA8 1641 aa4.32□□□□□ -1.72
COPS3-205ENST00000463097 ATP7BP35670 1465 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 A0A1B0GW55 424 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 ZNF726A6NNF4 738 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 LYRM9A8MSI8 78 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 F6UB75 175 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 SLC9A3R1O14745 358 aaPredicted RBP4.31□□□□□ -1.72
COPS3-205ENST00000463097 RRP8O43159 456 aaKnown RBP4.31□□□□□ -1.72
COPS3-205ENST00000463097 SERF1AO75920 110 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 IGHV3-23P01764 117 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 DUX4L2P0CJ85 424 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 DUX4L3P0CJ86 424 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 DUX4L4P0CJ87 422 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 DUX4L5P0CJ88 424 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 DUX4L6P0CJ89 424 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 DUX4L7P0CJ90 424 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 FOLR1P15328 257 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 FMO3P31513 532 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 BTCP35070 178 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 GPR4P46093 362 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 SLC25A11Q02978 314 aaKnown RBP4.31□□□□□ -1.72
COPS3-205ENST00000463097 GGTLC2Q14390 218 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 RPEL1Q2QD12 228 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 TRMT5Q32P41 509 aaKnown RBP4.31□□□□□ -1.72
COPS3-205ENST00000463097 C14orf177Q52M58 125 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 SPECC1LQ69YQ0 1117 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 DUX4L9Q6RFH8 374 aaPredicted RBP4.31□□□□□ -1.72
COPS3-205ENST00000463097 ZBED8Q8IZ13 594 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 ARHGAP18Q8N392 663 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 ZADH2Q8N4Q0 377 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 TRAM1L1Q8N609 369 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 KLHL30-AS1Q8NEE0 82 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 OR2AP1Q8NGE2 309 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.31□□□□□ -1.72
COPS3-205ENST00000463097 PIK3IP1Q96FE7 263 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 SMIM14Q96QK8 99 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 OSBPL10Q9BXB5 764 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 POLR2J2Q9GZM3 115 aaKnown RBP4.31□□□□□ -1.72
COPS3-205ENST00000463097 POLR2J3Q9H1A7 115 aaKnown RBP4.31□□□□□ -1.72
COPS3-205ENST00000463097 OR51J1Q9H342 316 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 NXF3Q9H4D5 531 aaKnown RBP4.31□□□□□ -1.72
COPS3-205ENST00000463097 XCL2Q9UBD3 114 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 DUX4Q9UBX2 424 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 ERCC6L2Q5T890 1561 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 ZFYVE16Q7Z3T8 1539 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 DLC1Q96QB1 1528 aa4.31□□□□□ -1.72
COPS3-205ENST00000463097 OVOS2A0A0G2JMS6 1433 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 OVOS2A0A0J9YW53 1432 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 NPHP4O75161 1426 aaPredicted RBP4.3□□□□□ -1.72
COPS3-205ENST00000463097 CRB1P82279 1406 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 OVOS2Q6IE36 1432 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 GON4LQ3T8J9 2241 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 ADGRA3Q8IWK6 1321 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 TSPAN11A1L157 253 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 KRTAP16-1A8MUX0 517 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 H3BQV1 296 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 LSM8O95777 96 aaKnown RBP4.3□□□□□ -1.72
COPS3-205ENST00000463097 HBE1P02100 147 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 P2RY4P51582 365 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 CCR8P51685 355 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 SP4Q02446 784 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 CKAP4Q07065 602 aaKnown RBP4.3□□□□□ -1.72
COPS3-205ENST00000463097 TWF1Q12792 350 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 HNRNPA0Q13151 305 aaKnown RBP4.3□□□□□ -1.72
COPS3-205ENST00000463097 RNLSQ5VYX0 342 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 DEGS2Q6QHC5 323 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 C6orf89Q6UWU4 347 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 CD302Q8IX05 232 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 LINC00301Q8NCQ3 95 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 OR10R2Q8NGX6 335 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 TCP10LQ8TDR4 215 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 CCDC12Q8WUD4 166 aaPredicted RBP4.3□□□□□ -1.72
COPS3-205ENST00000463097 NAPGQ99747 312 aaPredicted RBP4.3□□□□□ -1.72
COPS3-205ENST00000463097 DEFB129Q9H1M3 183 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 SH2D2AQ9NP31 389 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 ZNHIT6Q9NWK9 470 aaKnown RBP4.3□□□□□ -1.72
COPS3-205ENST00000463097 CD274Q9NZQ7 290 aa4.3□□□□□ -1.72
COPS3-205ENST00000463097 GMEB1Q9Y692 573 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms