RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 PNRC2Q9NPJ4 139 aaKnown RBP12.54□□□□□ -0.4
COL6A1-202ENST00000463060 SLC17A5Q9NRA2 495 aa12.54□□□□□ -0.4
COL6A1-202ENST00000463060 COQ3Q9NZJ6 369 aa12.54□□□□□ -0.4
COL6A1-202ENST00000463060 ASH2LQ9UBL3 628 aa12.54□□□□□ -0.4
COL6A1-202ENST00000463060 GDF2Q9UK05 429 aaPredicted RBP12.54□□□□□ -0.4
COL6A1-202ENST00000463060 EXOSC1Q9Y3B2 195 aaKnown RBP12.54□□□□□ -0.4
COL6A1-202ENST00000463060 TMEM14AQ9Y6G1 99 aa12.54□□□□□ -0.4
COL6A1-202ENST00000463060 A0A087WXM4 84 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 A0A096LPE4 126 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 ARPC4-TTLL3A0A0A6YYG9 625 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 A0A1W2PPZ6 126 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 TMEM129A0AVI4 362 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 DAPL1A0PJW8 107 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 EEF1E1-BLOC1S5C9J1V9 151 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 ZNF670-ZNF695F2Z2N8 137 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 RER1O15258 196 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 EEF1E1O43324 174 aaKnown RBP12.53□□□□□ -0.4
COL6A1-202ENST00000463060 FARS2O95363 451 aaKnown RBP12.53□□□□□ -0.4
COL6A1-202ENST00000463060 WNT11O96014 354 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 PATE4P0C8F1 98 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 ZNF32P17041 273 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 EMX1Q04741 257 aaPredicted RBP12.53□□□□□ -0.4
COL6A1-202ENST00000463060 FAM27E3Q08E93 113 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 DOC2BQ14184 412 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 EIF2B1Q14232 305 aaKnown RBP12.53□□□□□ -0.4
COL6A1-202ENST00000463060 RSPO1Q2MKA7 263 aaPredicted RBP12.53□□□□□ -0.4
COL6A1-202ENST00000463060 CCDC92Q53HC0 331 aaPredicted RBP12.53□□□□□ -0.4
COL6A1-202ENST00000463060 C1QTNF12Q5T7M4 302 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 SLC16A14Q7RTX9 510 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 DPPA2Q7Z7J5 298 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 CCDC36Q8IYA8 594 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 C17orf78Q8N4C9 275 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 GJC3Q8NFK1 279 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 RNF133Q8WVZ7 376 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 ITLN2Q8WWU7 325 aaPredicted RBP12.53□□□□□ -0.4
COL6A1-202ENST00000463060 ASB17Q8WXJ9 295 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 RNF166Q96A37 237 aaPredicted RBP12.53□□□□□ -0.4
COL6A1-202ENST00000463060 WNT5BQ9H1J7 359 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 OR10A4Q9H209 315 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 C1orf198Q9H425 327 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 NOX3Q9HBY0 568 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 GALNT8Q9NY28 637 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 LAMP5Q9UJQ1 280 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 SLC5A6Q9Y289 635 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 LSM2Q9Y333 95 aaKnown RBP12.53□□□□□ -0.4
COL6A1-202ENST00000463060 TIMM10BQ9Y5J6 103 aa12.53□□□□□ -0.4
COL6A1-202ENST00000463060 DIDO1Q9BTC0 2240 aaKnown RBP12.53□□□□□ -0.4
COL6A1-202ENST00000463060 CACNA1CQ13936 2221 aa12.52□□□□□ -0.41
COL6A1-202ENST00000463060 CIB4A0PJX0 185 aa12.52□□□□□ -0.41
COL6A1-202ENST00000463060 EIF4E1BA6NMX2 242 aaKnown RBP12.52□□□□□ -0.41
COL6A1-202ENST00000463060 PHYHO14832 338 aa12.52□□□□□ -0.41
COL6A1-202ENST00000463060 MAGEB4O15481 346 aaPredicted RBP12.52□□□□□ -0.41
COL6A1-202ENST00000463060 RAD51DO75771 328 aa12.52□□□□□ -0.41
COL6A1-202ENST00000463060 ABHD16AO95870 558 aa12.52□□□□□ -0.41
COL6A1-202ENST00000463060 HLA-HP01893 362 aa12.52□□□□□ -0.41
COL6A1-202ENST00000463060 CCKARP32238 428 aa12.52□□□□□ -0.41
COL6A1-202ENST00000463060 ASCL1P50553 236 aa12.52□□□□□ -0.41
COL6A1-202ENST00000463060 PCBD1P61457 104 aa12.52□□□□□ -0.41
COL6A1-202ENST00000463060 PSG4Q00888 419 aa12.52□□□□□ -0.41
COL6A1-202ENST00000463060 EGR3Q06889 387 aa12.52□□□□□ -0.41
COL6A1-202ENST00000463060 XAF1Q6GPH4 301 aa12.52□□□□□ -0.41
COL6A1-202ENST00000463060 DEGS2Q6QHC5 323 aa12.52□□□□□ -0.41
COL6A1-202ENST00000463060 ZNF322Q6U7Q0 402 aaPredicted RBP12.52□□□□□ -0.41
COL6A1-202ENST00000463060 BHLHA15Q7RTS1 189 aaPredicted RBP12.52□□□□□ -0.41
COL6A1-202ENST00000463060 SYS1Q8N2H4 156 aa12.52□□□□□ -0.41
COL6A1-202ENST00000463060 OR52N1Q8NH53 320 aa12.52□□□□□ -0.41
COL6A1-202ENST00000463060 OR52N5Q8NH56 324 aa12.52□□□□□ -0.41
COL6A1-202ENST00000463060 THEM6Q8WUY1 208 aa12.52□□□□□ -0.41
COL6A1-202ENST00000463060 OR8B4Q96RC9 309 aa12.52□□□□□ -0.41
COL6A1-202ENST00000463060 OR2H1Q9GZK4 316 aa12.52□□□□□ -0.41
COL6A1-202ENST00000463060 ACOT13Q9NPJ3 140 aa12.52□□□□□ -0.41
COL6A1-202ENST00000463060 SLCO1C1Q9NYB5 712 aa12.52□□□□□ -0.41
COL6A1-202ENST00000463060 MRM2Q9UI43 246 aaKnown RBP12.52□□□□□ -0.41
COL6A1-202ENST00000463060 CAB39Q9Y376 341 aaPredicted RBP12.52□□□□□ -0.41
COL6A1-202ENST00000463060 OR6C6A6NF89 314 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 WIPF3A6NGB9 483 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 OR5H1A6NKK0 313 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 SYNGR3O43761 229 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 ZG16O60844 167 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 SULT1C4O75897 302 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 PTHP01270 115 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 MYL12AP19105 171 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 OTX1P32242 354 aaPredicted RBP12.51□□□□□ -0.41
COL6A1-202ENST00000463060 UGT2B10P36537 528 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 OPRL1P41146 370 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 MAP2K4P45985 399 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 OR12D2P58182 307 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 RAB1AP62820 205 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 TUBA4AP68366 448 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 TFF3Q07654 80 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 TBCEQ15813 527 aaPredicted RBP12.51□□□□□ -0.41
COL6A1-202ENST00000463060 KRTAP27-1Q3LI81 207 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 SLC36A2Q495M3 483 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 TIMM23BQ5SRD1 257 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 OR2G6Q5TZ20 316 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 XKRXQ6PP77 449 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 C22orf34Q6ZV56 151 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 VASH1Q7L8A9 365 aaPredicted RBP12.51□□□□□ -0.41
COL6A1-202ENST00000463060 KCTD20Q7Z5Y7 419 aa12.51□□□□□ -0.41
COL6A1-202ENST00000463060 P2RY8Q86VZ1 359 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms