RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 FBXO34Q9NWN3 711 aa5.33□□□□□ -1.56
SMARCC1-204ENST00000462198 THUMPD1Q9NXG2 353 aaKnown RBP5.33□□□□□ -1.56
SMARCC1-204ENST00000462198 FLRT3Q9NZU0 649 aa5.33□□□□□ -1.56
SMARCC1-204ENST00000462198 P2RX2Q9UBL9 471 aa5.33□□□□□ -1.56
SMARCC1-204ENST00000462198 ELF5Q9UKW6 265 aaPredicted RBP5.33□□□□□ -1.56
SMARCC1-204ENST00000462198 BOKQ9UMX3 212 aaPredicted RBP5.33□□□□□ -1.56
SMARCC1-204ENST00000462198 ABCG2Q9UNQ0 655 aa5.33□□□□□ -1.56
SMARCC1-204ENST00000462198 MGAT4BQ9UQ53 548 aa5.33□□□□□ -1.56
SMARCC1-204ENST00000462198 AURKCQ9UQB9 309 aa5.33□□□□□ -1.56
SMARCC1-204ENST00000462198 TRAPPC4Q9Y296 219 aa5.33□□□□□ -1.56
SMARCC1-204ENST00000462198 PEX16Q9Y5Y5 336 aa5.33□□□□□ -1.56
SMARCC1-204ENST00000462198 KCNE3Q9Y6H6 103 aa5.33□□□□□ -1.56
SMARCC1-204ENST00000462198 TRBV5-3A0A0A0MS03 114 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 NPIPA5A0A0B4J1W7 369 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 PINLYPA6NC86 204 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 C5orf58C9J3I9 102 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 HSBP1L1C9JCN9 74 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 NPIPA7E9PJI5 369 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 PHYHO14832 338 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 NUPL2O15504 423 aaKnown RBP5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 CIDEAO60543 219 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 FCMRO60667 390 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 IGHG3P01860 377 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 BCHEP06276 602 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 NPIPA8P0DM63 369 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 RAP2AP10114 183 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 ETFAP13804 333 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 ANXA8P13928 327 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 PAX1P15863 534 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 HOXB9P17482 250 aaPredicted RBP5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 SPI1P17947 270 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 GPX2P18283 190 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 TBXA2RP21731 343 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 LCN1P31025 176 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 CEACAM8P31997 349 aaPredicted RBP5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 RPL35P42766 123 aaKnown RBP5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 SLC1A3P43003 542 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 CAPZA1P52907 286 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 MVDP53602 400 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 ATP5J2P56134 94 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 MTPNP58546 118 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 SLC35A2P78381 396 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 EMX1Q04741 257 aaPredicted RBP5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 LIPEQ05469 1076 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 CD47Q08722 323 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 PMS2P11Q13670 270 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 SMCO1Q147U7 214 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 CLEC12BQ2HXU8 276 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 TMEM44Q2T9K0 475 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 RFX4Q33E94 735 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 GCNT6Q5T4J0 391 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 ZNF691Q5VV52 312 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 LIPNQ5VXI9 398 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 BICRALQ6AI39 1079 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 PGBD2Q6P3X8 592 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 C1orf122Q6ZSJ8 110 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 TRILQ7L0X0 811 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 MARCH3Q86UD3 253 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 MSRB3Q8IXL7 192 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 ZNF619Q8N2I2 560 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 SLC43A2Q8N370 569 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 ZNF527Q8NB42 609 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 SLC24A4Q8NFF2 622 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 KBTBD8Q8NFY9 601 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 OR8J3Q8NGG0 315 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 SLC38A5Q8WUX1 472 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 MAL2Q969L2 176 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 RFT1Q96AA3 541 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 SARAFQ96BY9 339 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 TRNT1Q96Q11 434 aaKnown RBP5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 CPPED1Q9BRF8 314 aaPredicted RBP5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 PTDSS2Q9BVG9 487 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 PAPOLGQ9BWT3 736 aaKnown RBP5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 UGT2B28Q9BY64 529 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 TTTY12Q9BZ98 90 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 TINAGL1Q9GZM7 467 aaPredicted RBP5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 ZNF350Q9GZX5 532 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 TOR3AQ9H497 397 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 IKZF5Q9H5V7 419 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 ZDHHC11Q9H8X9 412 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 CACYBPQ9HB71 228 aaKnown RBP5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 HHATLQ9HCP6 504 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 GALNT9Q9HCQ5 603 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 SH2D2AQ9NP31 389 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 ZNF275Q9NSD4 429 aaPredicted RBP5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 DEPPQ9NTK1 212 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 CALML5Q9NZT1 146 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 PPP4R1LQ9P1A2 415 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 DNAJB9Q9UBS3 223 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 WARS2Q9UGM6 360 aaKnown RBP5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 MLXQ9UH92 298 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 MAGEL2Q9UJ55 1249 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 USP22Q9UPT9 525 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 GAB2Q9UQC2 676 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 SAMHD1Q9Y3Z3 626 aaKnown RBP5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 WDR45Q9Y484 360 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 LIPGQ9Y5X9 500 aa5.32□□□□□ -1.56
SMARCC1-204ENST00000462198 RAI1Q7Z5J4 1906 aaPredicted RBP5.31□□□□□ -1.56
SMARCC1-204ENST00000462198 MFSD2BA6NFX1 497 aa5.31□□□□□ -1.56
SMARCC1-204ENST00000462198 METTL15A6NJ78 407 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms