RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 OR4F15Q8NGB8 312 aa19.48■□□□□ 0.71
C9orf3-209ENST00000460573 OR8J1Q8NGP2 316 aa19.48■□□□□ 0.71
C9orf3-209ENST00000460573 OR2AJ1Q8NGZ0 328 aa19.48■□□□□ 0.71
C9orf3-209ENST00000460573 ZNRF4Q8WWF5 429 aa19.48■□□□□ 0.71
C9orf3-209ENST00000460573 MS4A3Q96HJ5 214 aa19.48■□□□□ 0.71
C9orf3-209ENST00000460573 WNT5BQ9H1J7 359 aa19.48■□□□□ 0.71
C9orf3-209ENST00000460573 VCXQ9H320 206 aa19.48■□□□□ 0.71
C9orf3-209ENST00000460573 MRPL22Q9NWU5 206 aaKnown RBP19.48■□□□□ 0.71
C9orf3-209ENST00000460573 H2AFY2Q9P0M6 372 aaPredicted RBP19.48■□□□□ 0.71
C9orf3-209ENST00000460573 IGHV2OR16-5A0A0B4J2B6 119 aa19.47■□□□□ 0.71
C9orf3-209ENST00000460573 A0A1W2PPR1 153 aa19.47■□□□□ 0.71
C9orf3-209ENST00000460573 SGCEO43556 437 aa19.47■□□□□ 0.71
C9orf3-209ENST00000460573 ATP6V1G2O95670 118 aa19.47■□□□□ 0.71
C9orf3-209ENST00000460573 PLAUP00749 431 aa19.47■□□□□ 0.71
C9orf3-209ENST00000460573 RAF1P04049 648 aa19.47■□□□□ 0.71
C9orf3-209ENST00000460573 ADAM8P78325 824 aa19.47■□□□□ 0.71
C9orf3-209ENST00000460573 TBC1D28Q2M2D7 210 aa19.47■□□□□ 0.71
C9orf3-209ENST00000460573 KLHL12Q53G59 568 aa19.47■□□□□ 0.71
C9orf3-209ENST00000460573 TEX30Q5JUR7 227 aa19.47■□□□□ 0.71
C9orf3-209ENST00000460573 NXNL2Q5VZ03 156 aa19.47■□□□□ 0.71
C9orf3-209ENST00000460573 MYPOPQ86VE0 399 aaPredicted RBP19.47■□□□□ 0.71
C9orf3-209ENST00000460573 GALNT4Q8N4A0 578 aa19.47■□□□□ 0.71
C9orf3-209ENST00000460573 KBTBD8Q8NFY9 601 aa19.47■□□□□ 0.71
C9orf3-209ENST00000460573 MBOAT4Q96T53 435 aa19.47■□□□□ 0.71
C9orf3-209ENST00000460573 MARCH7Q9H992 704 aa19.47■□□□□ 0.71
C9orf3-209ENST00000460573 IMPAD1Q9NX62 359 aa19.47■□□□□ 0.71
C9orf3-209ENST00000460573 NKX1-2Q9UD57 310 aaPredicted RBP19.47■□□□□ 0.71
C9orf3-209ENST00000460573 CYB5R1Q9UHQ9 305 aa19.47■□□□□ 0.71
C9orf3-209ENST00000460573 ATPIF1Q9UII2 106 aa19.47■□□□□ 0.71
C9orf3-209ENST00000460573 POU2F3Q9UKI9 436 aa19.47■□□□□ 0.71
C9orf3-209ENST00000460573 NDRG4Q9ULP0 352 aaKnown RBP19.47■□□□□ 0.71
C9orf3-209ENST00000460573 SPEF1Q9Y4P9 236 aa19.47■□□□□ 0.71
C9orf3-209ENST00000460573 TVP23AA6NH52 213 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 HS3ST1O14792 307 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 ZNF35P13682 527 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 CD99P14209 185 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 SLC2A5P22732 501 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 STOMP27105 288 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 GSTT1P30711 240 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 ENTPD1P49961 510 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 HIST1H3AP68431 136 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 SPOCK1Q08629 439 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 DBPQ10586 325 aaPredicted RBP19.46■□□□□ 0.71
C9orf3-209ENST00000460573 HIST2H3PS2Q5TEC6 136 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 LCN1P1Q5VSP4 162 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 PAMR1Q6UXH9 720 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 HIST2H3AQ71DI3 136 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 ZSCAN2Q7Z7L9 614 aaPredicted RBP19.46■□□□□ 0.71
C9orf3-209ENST00000460573 ZNF511Q8NB15 262 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 CPEB3Q8NE35 698 aaKnown RBP19.46■□□□□ 0.71
C9orf3-209ENST00000460573 LILRB1Q8NHL6 650 aaPredicted RBP19.46■□□□□ 0.71
C9orf3-209ENST00000460573 AKR7LQ8NHP1 331 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 AKAP1Q92667 903 aaKnown RBP eCLIP19.46■□□□□ 0.71
C9orf3-209ENST00000460573 PITX2Q99697 317 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 CDH20Q9HBT6 801 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 FAM118AQ9NWS6 357 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 PLEK2Q9NYT0 353 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 GMPPBQ9Y5P6 360 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 LHFPL6Q9Y693 200 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 COMMD3-BMI1R4GMX3 469 aa19.46■□□□□ 0.71
C9orf3-209ENST00000460573 ATP6V1G2-DDX39BF2Z307 99 aa19.45■□□□□ 0.7
C9orf3-209ENST00000460573 SLC16A6O15403 523 aa19.45■□□□□ 0.7
C9orf3-209ENST00000460573 CALCRP30988 508 aa19.45■□□□□ 0.7
C9orf3-209ENST00000460573 CDH11P55287 796 aa19.45■□□□□ 0.7
C9orf3-209ENST00000460573 RPS7P62081 194 aaKnown RBP19.45■□□□□ 0.7
C9orf3-209ENST00000460573 PCK2Q16822 640 aa19.45■□□□□ 0.7
C9orf3-209ENST00000460573 AADACL4Q5VUY2 407 aa19.45■□□□□ 0.7
C9orf3-209ENST00000460573 SLC18B1Q6NT16 456 aa19.45■□□□□ 0.7
C9orf3-209ENST00000460573 ZNF774Q6NX45 483 aa19.45■□□□□ 0.7
C9orf3-209ENST00000460573 C20orf204Q6ZNR8 217 aa19.45■□□□□ 0.7
C9orf3-209ENST00000460573 GID4Q8IVV7 300 aa19.45■□□□□ 0.7
C9orf3-209ENST00000460573 ZNF555Q8NEP9 628 aa19.45■□□□□ 0.7
C9orf3-209ENST00000460573 NUP37Q8NFH4 326 aa19.45■□□□□ 0.7
C9orf3-209ENST00000460573 FAM81AQ8TBF8 368 aa19.45■□□□□ 0.7
C9orf3-209ENST00000460573 FBXW5Q969U6 566 aa19.45■□□□□ 0.7
C9orf3-209ENST00000460573 IL4I1Q96RQ9 567 aa19.45■□□□□ 0.7
C9orf3-209ENST00000460573 INTS14Q96SY0 518 aa19.45■□□□□ 0.7
C9orf3-209ENST00000460573 TEAD3Q99594 435 aa19.45■□□□□ 0.7
C9orf3-209ENST00000460573 CISD1Q9NZ45 108 aaKnown RBP19.45■□□□□ 0.7
C9orf3-209ENST00000460573 ATP23Q9Y6H3 246 aa19.45■□□□□ 0.7
C9orf3-209ENST00000460573 AKAP9Q99996 3911 aa19.44■□□□□ 0.7
C9orf3-209ENST00000460573 LOC100130705A0A1B0GUX0 176 aa19.44■□□□□ 0.7
C9orf3-209ENST00000460573 SLC22A31A6NKX4 558 aa19.44■□□□□ 0.7
C9orf3-209ENST00000460573 ZNF593O00488 134 aaPredicted RBP19.44■□□□□ 0.7
C9orf3-209ENST00000460573 DOK2O60496 412 aa19.44■□□□□ 0.7
C9orf3-209ENST00000460573 APEX1P27695 318 aaKnown RBP19.44■□□□□ 0.7
C9orf3-209ENST00000460573 GDI2P50395 445 aaKnown RBP19.44■□□□□ 0.7
C9orf3-209ENST00000460573 GALK2Q01415 458 aa19.44■□□□□ 0.7
C9orf3-209ENST00000460573 APOFQ13790 326 aa19.44■□□□□ 0.7
C9orf3-209ENST00000460573 RAB35Q15286 201 aa19.44■□□□□ 0.7
C9orf3-209ENST00000460573 SNCBQ16143 134 aa19.44■□□□□ 0.7
C9orf3-209ENST00000460573 OTPQ5XKR4 325 aa19.44■□□□□ 0.7
C9orf3-209ENST00000460573 MEPCEQ7L2J0 689 aaKnown RBP19.44■□□□□ 0.7
C9orf3-209ENST00000460573 VASH1Q7L8A9 365 aaPredicted RBP19.44■□□□□ 0.7
C9orf3-209ENST00000460573 SHFQ7M4L6 423 aa19.44■□□□□ 0.7
C9orf3-209ENST00000460573 ZNF611Q8N823 705 aa19.44■□□□□ 0.7
C9orf3-209ENST00000460573 BBS1Q8NFJ9 593 aa19.44■□□□□ 0.7
C9orf3-209ENST00000460573 POM121L2Q96KW2 1035 aa19.44■□□□□ 0.7
C9orf3-209ENST00000460573 HDHD2Q9H0R4 259 aa19.44■□□□□ 0.7
C9orf3-209ENST00000460573 WDR76Q9H967 626 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms