RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 TMPRSS3P57727 454 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 RAB25P57735 213 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 BTG1P62324 171 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 DYRK1AQ13627 763 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 WDR38Q5JTN6 314 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 ZNF57Q68EA5 555 aaPredicted RBP12.59□□□□□ -0.39
ERCC3-205ENST00000460485 TIGD3Q6B0B8 471 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 IL20RBQ6UXL0 311 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 NHLRC1Q6VVB1 395 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 NKAIN3Q8N8D7 197 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 OR4M2Q8NGB6 313 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 LGALS14Q8TCE9 139 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 CT55Q8WUE5 264 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 SMIM4Q8WVI0 70 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 HPS1Q92902 700 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 TMEM106AQ96A25 262 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 INTS12Q96CB8 462 aaKnown RBP12.59□□□□□ -0.39
ERCC3-205ENST00000460485 S100A16Q96FQ6 103 aaKnown RBP12.59□□□□□ -0.39
ERCC3-205ENST00000460485 OR5B2Q96R09 309 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 THAP7Q9BT49 309 aaPredicted RBP12.59□□□□□ -0.39
ERCC3-205ENST00000460485 HDHD2Q9H0R4 259 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 CDCP1Q9H5V8 836 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 AKIRIN1Q9H9L7 192 aaPredicted RBP12.59□□□□□ -0.39
ERCC3-205ENST00000460485 PLEKHA1Q9HB21 404 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 ZNF160Q9HCG1 818 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 B3GAT2Q9NPZ5 323 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 ABI3Q9P2A4 366 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 B3GAT1Q9P2W7 334 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 HHLA2Q9UM44 414 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 DHDHQ9UQ10 334 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 FARSAQ9Y285 508 aaKnown RBP12.59□□□□□ -0.39
ERCC3-205ENST00000460485 COA3Q9Y2R0 106 aaPredicted RBP12.59□□□□□ -0.39
ERCC3-205ENST00000460485 AK6Q9Y3D8 172 aaKnown RBP12.59□□□□□ -0.39
ERCC3-205ENST00000460485 LRP12Q9Y561 859 aa12.59□□□□□ -0.39
ERCC3-205ENST00000460485 MEIOCA2RUB1 952 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 NAP1L6A6NFF2 107 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 HMX3A6NHT5 357 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 ZNF726A6NNF4 738 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 B4DXG7 233 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 MAGEB4O15481 346 aaPredicted RBP12.58□□□□□ -0.4
ERCC3-205ENST00000460485 PLA2G10O15496 165 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 PGA4P0DJD7 388 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 PGA3P0DJD8 388 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 KIR3DL2P43630 455 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 EIF2B2P49770 351 aaKnown RBP12.58□□□□□ -0.4
ERCC3-205ENST00000460485 P2RY4P51582 365 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 RAG2P55895 527 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 RAC1P63000 192 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 TMEM225Q6GV28 225 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 KLHL24Q6TFL4 600 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.58□□□□□ -0.4
ERCC3-205ENST00000460485 PRSS35Q8N3Z0 413 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 ST7LQ8TDW4 575 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 FOXRED1Q96CU9 486 aaPredicted RBP12.58□□□□□ -0.4
ERCC3-205ENST00000460485 MESP1Q9BRJ9 268 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 MARVELD1Q9BSK0 173 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 TRAF4Q9BUZ4 470 aaPredicted RBP12.58□□□□□ -0.4
ERCC3-205ENST00000460485 SF3B5Q9BWJ5 86 aaKnown RBP12.58□□□□□ -0.4
ERCC3-205ENST00000460485 SPRY4Q9C004 299 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 C1orf198Q9H425 327 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 EMC3Q9P0I2 261 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 STEAP1Q9UHE8 339 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 FBXL2Q9UKC9 423 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 ITGB1BP2Q9UKP3 347 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 COL12A1Q99715 3063 aa12.58□□□□□ -0.4
ERCC3-205ENST00000460485 C2orf72A6NCS6 295 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 GABARAPH6UMI1 98 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 EFNA2O43921 213 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 SRSF10O75494 262 aaKnown RBP12.57□□□□□ -0.4
ERCC3-205ENST00000460485 H2BFMP0C1H6 154 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 GSTT2BP0CG30 244 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 HLA-DOBP13765 273 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 TCN2P20062 427 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 SLC6A1P30531 599 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 DDOSTP39656 456 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 CASRP41180 1078 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 ZNF133P52736 654 aaPredicted RBP12.57□□□□□ -0.4
ERCC3-205ENST00000460485 ART1P52961 327 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 TPTEP56180 551 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 SSBP1Q04837 148 aaKnown RBP12.57□□□□□ -0.4
ERCC3-205ENST00000460485 HIST3H3Q16695 136 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 HES3Q5TGS1 186 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 GLT8D1Q68CQ7 371 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 LRRTM1Q86UE6 522 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 ZNF433Q8N7K0 673 aaPredicted RBP12.57□□□□□ -0.4
ERCC3-205ENST00000460485 CELF2-AS1Q8N7Q2 184 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 CCDC54Q8NEL0 328 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 HSD17B8Q92506 261 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 HAVCR1Q96D42 359 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 ACTR6Q9GZN1 396 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 MALT1Q9UDY8 824 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 IL17BQ9UHF5 180 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 ZNF221Q9UK13 617 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 CACNG2Q9Y698 323 aa12.57□□□□□ -0.4
ERCC3-205ENST00000460485 A0A0A6YYH2 397 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 A6NJ64 397 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 ZNF878C9JN71 531 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 PSMD9O00233 223 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 SLC17A2O00624 439 aa12.56□□□□□ -0.4
ERCC3-205ENST00000460485 CCNKO75909 580 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms