RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 GVINP1Q7Z2Y8 2422 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 MYO18BQ8IUG5 2567 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 MAP3K15Q6ZN16 1313 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 KDM3BQ7LBC6 1761 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 ABCA12Q86UK0 2595 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 AFDNP55196 1824 aaKnown RBP2.12□□□□□ -2.07
RFC4-211ENST00000460408 SLX4Q8IY92 1834 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 DOPEY1Q5JWR5 2465 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 CACNA1SQ13698 1873 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 ADGRB1O14514 1584 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 CNOT1A5YKK6 2376 aaKnown RBP2.12□□□□□ -2.07
RFC4-211ENST00000460408 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.12□□□□□ -2.07
RFC4-211ENST00000460408 PLAC8L1A1L4L8 177 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 H3BNH8 94 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 LAD1O00515 517 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 ZNF30P17039 623 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 SLC2A5P22732 501 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 RPS12P25398 132 aaKnown RBP2.12□□□□□ -2.07
RFC4-211ENST00000460408 CXCL5P42830 114 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 RFX3P48380 749 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 CCR8P51685 355 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 UCNP55089 124 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 GPX6P59796 221 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 PAX5Q02548 391 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 ZNF92Q03936 586 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 MADCAM1Q13477 382 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 AQP6Q13520 282 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 PIGGQ5H8A4 983 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 RNASEKQ6P5S7 137 aaKnown RBP2.12□□□□□ -2.07
RFC4-211ENST00000460408 C19orf35Q6ZS72 473 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 LINC00173Q6ZV60 143 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 TAS2R42Q7RTR8 314 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 NANOGNBQ7Z5D8 188 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 TMEM135Q86UB9 458 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 ENTHD1Q8IYW4 607 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 OR2G2Q8NGZ5 317 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 KCNG3Q8TAE7 436 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 SLC22A8Q8TCC7 542 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 RNF139Q8WU17 664 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 N4BP2L2Q92802 583 aaPredicted RBP2.12□□□□□ -2.07
RFC4-211ENST00000460408 TMEM54Q969K7 222 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 CNDP1Q96KN2 507 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 ECSITQ9BQ95 431 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 TCHPQ9BT92 498 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 UPF3BQ9BZI7 483 aaKnown RBP2.12□□□□□ -2.07
RFC4-211ENST00000460408 CDC42EP4Q9H3Q1 356 aaKnown RBP2.12□□□□□ -2.07
RFC4-211ENST00000460408 SLCO1B3Q9NPD5 702 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 SLC2A8Q9NY64 477 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 STARD10Q9Y365 291 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 RRP15Q9Y3B9 282 aaKnown RBP2.12□□□□□ -2.07
RFC4-211ENST00000460408 MTCL1Q9Y4B5 1905 aaKnown RBP2.12□□□□□ -2.07
RFC4-211ENST00000460408 ARFGEF2Q9Y6D5 1785 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 MAP2P11137 1827 aaKnown RBP2.12□□□□□ -2.07
RFC4-211ENST00000460408 NFAT5O94916 1531 aa2.12□□□□□ -2.07
RFC4-211ENST00000460408 CEMIPQ8WUJ3 1361 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 TONSLQ96HA7 1378 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 NRXN2Q9P2S2 1712 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 ANKRD26Q9UPS8 1709 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 SSC5DA1L4H1 1573 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 ANKRD17O75179 2603 aaKnown RBP2.11□□□□□ -2.07
RFC4-211ENST00000460408 TEP1Q99973 2627 aaKnown RBP2.11□□□□□ -2.07
RFC4-211ENST00000460408 MYO9BQ13459 2157 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 A0A096LNJ9 63 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 AP3B1O00203 1094 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 CD5LO43866 347 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 SOX15O60248 233 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 EIF3GO75821 320 aaKnown RBP eCLIP2.11□□□□□ -2.07
RFC4-211ENST00000460408 TSPAN13O95857 204 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 C6orf47O95873 294 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 BGLAPP02818 100 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 ZDHHC11BP0C7U3 371 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 PNMA6AP0CW24 399 aaPredicted RBP2.11□□□□□ -2.07
RFC4-211ENST00000460408 SMIM10L1P0DMW3 83 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 ADRB3P13945 408 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 FOLR1P15328 257 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 IFNA8P32881 189 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 NCBP2P52298 156 aaKnown RBP eCLIP2.11□□□□□ -2.07
RFC4-211ENST00000460408 ZNF136P52737 540 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 UGT2B15P54855 530 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 RPS21P63220 83 aaKnown RBP2.11□□□□□ -2.07
RFC4-211ENST00000460408 HMGN5P82970 282 aaKnown RBP2.11□□□□□ -2.07
RFC4-211ENST00000460408 TMEM183BQ1AE95 376 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 COA6Q5JTJ3 125 aaKnown RBP2.11□□□□□ -2.07
RFC4-211ENST00000460408 SASS6Q6UVJ0 657 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 TMEM107Q6UX40 140 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 NIPA1Q7RTP0 329 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 C12orf56Q8IXR9 622 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 TMEM183AQ8IXX5 376 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 ZNF786Q8N393 782 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 STPG2Q8N412 459 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 HSD17B11Q8NBQ5 300 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 B3GNT7Q8NFL0 401 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 OR1S2Q8NGQ3 325 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 RAB3IL1Q8TBN0 382 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 MARCH1Q8TCQ1 289 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 ACTRT1Q8TDG2 376 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 CD300LFQ8TDQ1 290 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 SDR42E1Q8WUS8 393 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 RASD2Q96D21 266 aa2.11□□□□□ -2.07
RFC4-211ENST00000460408 SMIM10Q96HG1 83 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms