RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 ALKBH6Q3KRA9 238 aa19.68■□□□□ 0.74
PTPN4-208ENST00000460289 C6orf52Q5T4I8 152 aa19.68■□□□□ 0.74
PTPN4-208ENST00000460289 LEG1Q6P5S2 330 aa19.68■□□□□ 0.74
PTPN4-208ENST00000460289 PGM2L1Q6PCE3 622 aa19.68■□□□□ 0.74
PTPN4-208ENST00000460289 ZNF620Q6ZNG0 422 aa19.68■□□□□ 0.74
PTPN4-208ENST00000460289 ABHD4Q8TB40 342 aa19.68■□□□□ 0.74
PTPN4-208ENST00000460289 RDH5Q92781 318 aa19.68■□□□□ 0.74
PTPN4-208ENST00000460289 THTPAQ9BU02 230 aa19.68■□□□□ 0.74
PTPN4-208ENST00000460289 IGHV4-61A0A0C4DH41 118 aa19.67■□□□□ 0.74
PTPN4-208ENST00000460289 C17orf100A8MU93 164 aa19.67■□□□□ 0.74
PTPN4-208ENST00000460289 DOK2O60496 412 aa19.67■□□□□ 0.74
PTPN4-208ENST00000460289 HPXP02790 462 aa19.67■□□□□ 0.74
PTPN4-208ENST00000460289 IGHV4-31P0DP07 118 aa19.67■□□□□ 0.74
PTPN4-208ENST00000460289 ZNF23P17027 643 aa19.67■□□□□ 0.74
PTPN4-208ENST00000460289 TUBG1P23258 451 aa19.67■□□□□ 0.74
PTPN4-208ENST00000460289 CENPAP49450 140 aa19.67■□□□□ 0.74
PTPN4-208ENST00000460289 MRPS11P82912 194 aaKnown RBP19.67■□□□□ 0.74
PTPN4-208ENST00000460289 TRAP1Q12931 704 aaKnown RBP19.67■□□□□ 0.74
PTPN4-208ENST00000460289 RIN1Q13671 783 aa19.67■□□□□ 0.74
PTPN4-208ENST00000460289 ELFN2Q5R3F8 820 aa19.67■□□□□ 0.74
PTPN4-208ENST00000460289 MBNL2Q5VZF2 373 aaKnown RBP19.67■□□□□ 0.74
PTPN4-208ENST00000460289 OR2T5Q6IEZ7 315 aa19.67■□□□□ 0.74
PTPN4-208ENST00000460289 OR52L1Q8NGH7 329 aa19.67■□□□□ 0.74
PTPN4-208ENST00000460289 OR4C15Q8NGM1 316 aa19.67■□□□□ 0.74
PTPN4-208ENST00000460289 OR2T29Q8NH02 315 aa19.67■□□□□ 0.74
PTPN4-208ENST00000460289 OR4K13Q8NH42 304 aa19.67■□□□□ 0.74
PTPN4-208ENST00000460289 CCDC124Q96CT7 223 aaKnown RBP19.67■□□□□ 0.74
PTPN4-208ENST00000460289 MARS2Q96GW9 593 aaKnown RBP19.67■□□□□ 0.74
PTPN4-208ENST00000460289 NMNAT3Q96T66 252 aa19.67■□□□□ 0.74
PTPN4-208ENST00000460289 REEP1Q9H902 201 aa19.67■□□□□ 0.74
PTPN4-208ENST00000460289 SRA1Q9HD15 236 aaKnown RBP19.67■□□□□ 0.74
PTPN4-208ENST00000460289 TUBG2Q9NRH3 451 aa19.67■□□□□ 0.74
PTPN4-208ENST00000460289 PLEK2Q9NYT0 353 aa19.67■□□□□ 0.74
PTPN4-208ENST00000460289 ASH2LQ9UBL3 628 aa19.67■□□□□ 0.74
PTPN4-208ENST00000460289 B9D1Q9UPM9 204 aa19.67■□□□□ 0.74
PTPN4-208ENST00000460289 LYNX1G3V0Z9 82 aa19.66■□□□□ 0.74
PTPN4-208ENST00000460289 H3BSA7 217 aa19.66■□□□□ 0.74
PTPN4-208ENST00000460289 MPZL1O95297 269 aa19.66■□□□□ 0.74
PTPN4-208ENST00000460289 LYNX1P0DP58 116 aa19.66■□□□□ 0.74
PTPN4-208ENST00000460289 RAP2AP10114 183 aa19.66■□□□□ 0.74
PTPN4-208ENST00000460289 HIST1H1CP16403 213 aaKnown RBP19.66■□□□□ 0.74
PTPN4-208ENST00000460289 ACHEP22303 614 aa19.66■□□□□ 0.74
PTPN4-208ENST00000460289 HTR5AP47898 357 aa19.66■□□□□ 0.74
PTPN4-208ENST00000460289 VASH1Q7L8A9 365 aaPredicted RBP19.66■□□□□ 0.74
PTPN4-208ENST00000460289 OR9Q2Q8NGE9 314 aa19.66■□□□□ 0.74
PTPN4-208ENST00000460289 SLC25A40Q8TBP6 338 aa19.66■□□□□ 0.74
PTPN4-208ENST00000460289 CLPTM1LQ96KA5 538 aa19.66■□□□□ 0.74
PTPN4-208ENST00000460289 TSSK2Q96PF2 358 aa19.66■□□□□ 0.74
PTPN4-208ENST00000460289 BTBD10Q9BSF8 475 aa19.66■□□□□ 0.74
PTPN4-208ENST00000460289 OR2J1Q9GZK6 312 aa19.66■□□□□ 0.74
PTPN4-208ENST00000460289 CHODLQ9H9P2 273 aa19.66■□□□□ 0.74
PTPN4-208ENST00000460289 NKIRAS2Q9NYR9 191 aa19.66■□□□□ 0.74
PTPN4-208ENST00000460289 CDH10Q9Y6N8 788 aa19.66■□□□□ 0.74
PTPN4-208ENST00000460289 ACOT8O14734 319 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 GYG2O15488 501 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 ABHD16AO95870 558 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 NGFP01138 241 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 GASTP01350 101 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 TACSTD2P09758 323 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 COL8A2P25067 703 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 LIPAP38571 399 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 CHN2P52757 468 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 PPP1CBP62140 327 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 GLO1Q04760 184 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 MICAQ29983 383 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 DNAL1Q4LDG9 190 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 SPATA46Q5T0L3 261 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 ZNF770Q6IQ21 691 aaPredicted RBP19.65■□□□□ 0.74
PTPN4-208ENST00000460289 HIPK1Q86Z02 1210 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 OR6V1Q8N148 313 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 GJC3Q8NFK1 279 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 KLF14Q8TD94 323 aaPredicted RBP19.65■□□□□ 0.74
PTPN4-208ENST00000460289 RACGAP1Q9H0H5 632 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 EGLN3Q9H6Z9 239 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 CYSLTR2Q9NS75 346 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 TBCCD1Q9NVR7 557 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 IL20Q9NYY1 176 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 POLR1DQ9Y2S0 133 aa19.65■□□□□ 0.74
PTPN4-208ENST00000460289 SAMHD1Q9Y3Z3 626 aaKnown RBP19.65■□□□□ 0.74
PTPN4-208ENST00000460289 IGLV1-36A0A0B4J1U3 117 aa19.64■□□□□ 0.73
PTPN4-208ENST00000460289 PLSCR5A0PG75 271 aa19.64■□□□□ 0.73
PTPN4-208ENST00000460289 DCTN6O00399 190 aa19.64■□□□□ 0.73
PTPN4-208ENST00000460289 HOXB6P17509 224 aaKnown RBP19.64■□□□□ 0.73
PTPN4-208ENST00000460289 GSTM3P21266 225 aa19.64■□□□□ 0.73
PTPN4-208ENST00000460289 MAGEB1P43366 347 aa19.64■□□□□ 0.73
PTPN4-208ENST00000460289 TMEM33P57088 247 aa19.64■□□□□ 0.73
PTPN4-208ENST00000460289 GK3PQ14409 553 aa19.64■□□□□ 0.73
PTPN4-208ENST00000460289 CLEC12AQ5QGZ9 265 aa19.64■□□□□ 0.73
PTPN4-208ENST00000460289 RASSF6Q6ZTQ3 369 aa19.64■□□□□ 0.73
PTPN4-208ENST00000460289 RFPL4BQ6ZWI9 263 aa19.64■□□□□ 0.73
PTPN4-208ENST00000460289 ZBTB46Q86UZ6 589 aa19.64■□□□□ 0.73
PTPN4-208ENST00000460289 NPEPL1Q8NDH3 523 aa19.64■□□□□ 0.73
PTPN4-208ENST00000460289 HPS1Q92902 700 aa19.64■□□□□ 0.73
PTPN4-208ENST00000460289 COG8Q96MW5 612 aa19.64■□□□□ 0.73
PTPN4-208ENST00000460289 RPRD1BQ9NQG5 326 aaKnown RBP19.64■□□□□ 0.73
PTPN4-208ENST00000460289 TMEM160Q9NX00 188 aa19.64■□□□□ 0.73
PTPN4-208ENST00000460289 ATPIF1Q9UII2 106 aa19.64■□□□□ 0.73
PTPN4-208ENST00000460289 U3KQV3 271 aa19.64■□□□□ 0.73
PTPN4-208ENST00000460289 SONP18583 2426 aaKnown RBP19.63■□□□□ 0.73
PTPN4-208ENST00000460289 YLPM1P49750 1951 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms