RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 HTR5AP47898 357 aa13.39□□□□□ -0.27
CHCHD3-204ENST00000457942 LMO4P61968 165 aa13.39□□□□□ -0.27
CHCHD3-204ENST00000457942 SCRN3Q0VDG4 424 aa13.39□□□□□ -0.27
CHCHD3-204ENST00000457942 ENDOGQ14249 297 aaKnown RBP13.39□□□□□ -0.27
CHCHD3-204ENST00000457942 ZBED5Q49AG3 693 aa13.39□□□□□ -0.27
CHCHD3-204ENST00000457942 ZMAT1Q5H9K5 638 aa13.39□□□□□ -0.27
CHCHD3-204ENST00000457942 FAM209AQ5JX71 171 aa13.39□□□□□ -0.27
CHCHD3-204ENST00000457942 MBNL2Q5VZF2 373 aaKnown RBP13.39□□□□□ -0.27
CHCHD3-204ENST00000457942 ACSM5Q6NUN0 579 aa13.39□□□□□ -0.27
CHCHD3-204ENST00000457942 C1orf174Q8IYL3 243 aa13.39□□□□□ -0.27
CHCHD3-204ENST00000457942 GCDHQ92947 438 aaPredicted RBP13.39□□□□□ -0.27
CHCHD3-204ENST00000457942 C4orf45Q96LM5 186 aa13.39□□□□□ -0.27
CHCHD3-204ENST00000457942 Q96M85 177 aa13.39□□□□□ -0.27
CHCHD3-204ENST00000457942 GAL3ST1Q99999 423 aa13.39□□□□□ -0.27
CHCHD3-204ENST00000457942 MYLK2Q9H1R3 596 aa13.39□□□□□ -0.27
CHCHD3-204ENST00000457942 CGGBP1Q9UFW8 167 aaPredicted RBP13.39□□□□□ -0.27
CHCHD3-204ENST00000457942 ENPP4Q9Y6X5 453 aa13.39□□□□□ -0.27
CHCHD3-204ENST00000457942 ZSCAN5BA6NJL1 495 aa13.38□□□□□ -0.27
CHCHD3-204ENST00000457942 PNPP00491 289 aa13.38□□□□□ -0.27
CHCHD3-204ENST00000457942 NGFP01138 241 aa13.38□□□□□ -0.27
CHCHD3-204ENST00000457942 H1F0P07305 194 aaKnown RBP13.38□□□□□ -0.27
CHCHD3-204ENST00000457942 GSTM3P21266 225 aa13.38□□□□□ -0.27
CHCHD3-204ENST00000457942 LIPAP38571 399 aa13.38□□□□□ -0.27
CHCHD3-204ENST00000457942 SLC3A1Q07837 685 aa13.38□□□□□ -0.27
CHCHD3-204ENST00000457942 KRR1Q13601 381 aaKnown RBP13.38□□□□□ -0.27
CHCHD3-204ENST00000457942 MESTQ5EB52 335 aa13.38□□□□□ -0.27
CHCHD3-204ENST00000457942 FOXL2NBQ6ZUU3 175 aa13.38□□□□□ -0.27
CHCHD3-204ENST00000457942 PEG10Q86TG7 708 aaKnown RBP13.38□□□□□ -0.27
CHCHD3-204ENST00000457942 SGMS2Q8NHU3 365 aa13.38□□□□□ -0.27
CHCHD3-204ENST00000457942 RASD2Q96D21 266 aa13.38□□□□□ -0.27
CHCHD3-204ENST00000457942 ANKRD19PQ9H560 264 aa13.38□□□□□ -0.27
CHCHD3-204ENST00000457942 NMNAT1Q9HAN9 279 aaPredicted RBP13.38□□□□□ -0.27
CHCHD3-204ENST00000457942 KRCC1Q9NPI7 259 aaPredicted RBP13.38□□□□□ -0.27
CHCHD3-204ENST00000457942 UBAP1Q9NZ09 502 aa13.38□□□□□ -0.27
CHCHD3-204ENST00000457942 EGFL7Q9UHF1 273 aa13.38□□□□□ -0.27
CHCHD3-204ENST00000457942 AURKCQ9UQB9 309 aa13.38□□□□□ -0.27
CHCHD3-204ENST00000457942 POLR1DQ9Y2S0 133 aa13.38□□□□□ -0.27
CHCHD3-204ENST00000457942 TANC2Q9HCD6 1990 aa13.38□□□□□ -0.27
CHCHD3-204ENST00000457942 A0A0G2JMP0 313 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 TEX13CA0A0J9YWL9 993 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 A0A0X1KG70 313 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 PRSS37A4D1T9 235 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 H3BSA7 217 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 SGCEO43556 437 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 PRSS23O95084 383 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 NDUFB2O95178 105 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 MMP15P51511 669 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 PSME3P61289 254 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 FHL1Q13642 323 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 KRT72Q14CN4 511 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 C1orf94Q6P1W5 598 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 HACD2Q6Y1H2 254 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 TMPRSS11FQ6ZWK6 438 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 ZER1Q7Z7L7 766 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 SYT9Q86SS6 491 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 TEX29Q8N6K0 151 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 NPEPL1Q8NDH3 523 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 OR4M2Q8NGB6 313 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 SLC7A13Q8TCU3 470 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 CMTM5Q96DZ9 223 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 RSRC1Q96IZ7 334 aaKnown RBP13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 MSL2Q9HCI7 577 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 PLEK2Q9NYT0 353 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 ADA2Q9NZK5 511 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 ARL2BPQ9Y2Y0 163 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 V9GYQ6 96 aa13.37□□□□□ -0.27
CHCHD3-204ENST00000457942 WNK2Q9Y3S1 2297 aa13.36□□□□□ -0.27
CHCHD3-204ENST00000457942 SOCS2O14508 198 aa13.36□□□□□ -0.27
CHCHD3-204ENST00000457942 IGHV2-5P01817 119 aa13.36□□□□□ -0.27
CHCHD3-204ENST00000457942 SCG5P05408 212 aa13.36□□□□□ -0.27
CHCHD3-204ENST00000457942 CTLA4P16410 223 aa13.36□□□□□ -0.27
CHCHD3-204ENST00000457942 TNFSF4P23510 183 aa13.36□□□□□ -0.27
CHCHD3-204ENST00000457942 CENPAP49450 140 aa13.36□□□□□ -0.27
CHCHD3-204ENST00000457942 TNFAIP6P98066 277 aaPredicted RBP13.36□□□□□ -0.27
CHCHD3-204ENST00000457942 MTX3Q5HYI7 312 aa13.36□□□□□ -0.27
CHCHD3-204ENST00000457942 TMEM255AQ5JRV8 349 aa13.36□□□□□ -0.27
CHCHD3-204ENST00000457942 OTPQ5XKR4 325 aa13.36□□□□□ -0.27
CHCHD3-204ENST00000457942 C8orf82Q6P1X6 216 aaPredicted RBP13.36□□□□□ -0.27
CHCHD3-204ENST00000457942 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.36□□□□□ -0.27
CHCHD3-204ENST00000457942 DIRC2Q96SL1 478 aa13.36□□□□□ -0.27
CHCHD3-204ENST00000457942 WACQ9BTA9 647 aa13.36□□□□□ -0.27
CHCHD3-204ENST00000457942 SYT4Q9H2B2 425 aa13.36□□□□□ -0.27
CHCHD3-204ENST00000457942 SPAG4Q9NPE6 437 aa13.36□□□□□ -0.27
CHCHD3-204ENST00000457942 IL20RAQ9UHF4 553 aa13.36□□□□□ -0.27
CHCHD3-204ENST00000457942 ZDHHC8Q9ULC8 765 aa13.36□□□□□ -0.27
CHCHD3-204ENST00000457942 SAMD4AQ9UPU9 718 aaKnown RBP13.36□□□□□ -0.27
CHCHD3-204ENST00000457942 LOC105371242A0A075B767 164 aa13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 PLPP2O43688 288 aa13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 AHCYL1O43865 530 aa13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 SLC16A7O60669 478 aa13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 KHDRBS3O75525 346 aaKnown RBP13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 DIRAS1O95057 198 aa13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 COX5BP10606 129 aa13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 RHCEP18577 417 aa13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 SDHAP31040 664 aa13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 AQP6Q13520 282 aa13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 DCAF12L2Q5VW00 463 aa13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 GPR139Q6DWJ6 353 aa13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 GLYATQ6IB77 296 aa13.35□□□□□ -0.27
CHCHD3-204ENST00000457942 FAM122BQ7Z309 247 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms