RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 ALG10Q5BKT4 473 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 MESTQ5EB52 335 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 RNASE10Q5GAN6 216 aaKnown RBP9.28□□□□□ -0.92
CLIP4-208ENST00000456385 ABHD13Q7L211 337 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 RTN4RL2Q86UN3 420 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 AKR1E2Q96JD6 320 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 ZNF285Q96NJ3 590 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 PAPOLGQ9BWT3 736 aaKnown RBP9.28□□□□□ -0.92
CLIP4-208ENST00000456385 TEX101Q9BY14 249 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 SYT4Q9H2B2 425 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 ELOVL3Q9HB03 270 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 RPS10P5Q9NQ39 176 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 SLC17A5Q9NRA2 495 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 DZANK1Q9NVP4 752 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 DPP7Q9UHL4 492 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 NUP210LQ5VU65 1888 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 A6NLC8 198 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 NUDT19A8MXV4 375 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 EFSO43281 561 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 PRKNO60260 465 aaPredicted RBP9.28□□□□□ -0.92
CLIP4-208ENST00000456385 NKX2-2O95096 273 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 PLGP00747 810 aaPredicted RBP9.28□□□□□ -0.92
CLIP4-208ENST00000456385 OR8U8P0C7N1 319 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 SMIM10L1P0DMW3 83 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 DAOP14920 347 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 TACR3P29371 465 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 SLC25A1P53007 311 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 ADPRHP54922 357 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 RPS15AP62244 130 aaKnown RBP9.28□□□□□ -0.92
CLIP4-208ENST00000456385 NAAAQ02083 359 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 ITPRIPL2Q3MIP1 535 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 FJX1Q86VR8 437 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 C15orf54Q8N8G6 183 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 OR4C3Q8NH37 302 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 LCN9Q8WX39 176 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 ZNF775Q96BV0 537 aaPredicted RBP9.28□□□□□ -0.92
CLIP4-208ENST00000456385 MRPL38Q96DV4 380 aaKnown RBP9.28□□□□□ -0.92
CLIP4-208ENST00000456385 SMIM10Q96HG1 83 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 OR2A5Q96R48 311 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 ELF4Q99607 663 aaPredicted RBP9.28□□□□□ -0.92
CLIP4-208ENST00000456385 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.28□□□□□ -0.92
CLIP4-208ENST00000456385 OR5AC2Q9NZP5 309 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 ARID1AO14497 2285 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 NOTCH4Q99466 2003 aa9.28□□□□□ -0.92
CLIP4-208ENST00000456385 TBC1D3IA0A087WXS9 549 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 hCG_1809904A0A1W2PP81 198 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 A0A1W2PR64 198 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 A0A1W2PRV1 198 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 PRAMEF26H0Y7S4 382 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 LRP3O75074 770 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 ADAP1O75689 374 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 GPR75O95800 540 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 ZNF14P17017 642 aaPredicted RBP9.27□□□□□ -0.92
CLIP4-208ENST00000456385 RCC1P18754 421 aaPredicted RBP9.27□□□□□ -0.92
CLIP4-208ENST00000456385 AGAP20933 346 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 NME2P22392 152 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 HRH1P35367 487 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 LSSP48449 732 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 DEFB103AP81534 67 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 MFGE8Q08431 387 aaPredicted RBP9.27□□□□□ -0.92
CLIP4-208ENST00000456385 SPOCK1Q08629 439 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 SGCAQ16586 387 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 ISXQ2M1V0 245 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 C9orf152Q5JTZ5 239 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 KRBOX4Q5JUW0 171 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 DRAM2Q6UX65 266 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 MDGA2Q7Z553 956 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 TRAPPC6BQ86SZ2 158 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 JAGN1Q8N5M9 183 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 GATSQ8NAP1 163 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 ZNF563Q8TA94 476 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 ARL5BQ96KC2 179 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 IP6K3Q96PC2 410 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 GPX7Q96SL4 187 aaPredicted RBP9.27□□□□□ -0.92
CLIP4-208ENST00000456385 PRRT1Q99946 306 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 KXD1Q9BQD3 176 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 SULT4A1Q9BR01 284 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 LRIT1Q9P2V4 623 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 CACFD1Q9UGQ2 172 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 MAFFQ9ULX9 164 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 MPDZO75970 2070 aa9.27□□□□□ -0.92
CLIP4-208ENST00000456385 TRBV6-7A0A0A0MS04 114 aa9.27□□□□□ -0.93
CLIP4-208ENST00000456385 DBX1A6NMT0 343 aa9.27□□□□□ -0.93
CLIP4-208ENST00000456385 FAM157AC9JC47 383 aa9.27□□□□□ -0.93
CLIP4-208ENST00000456385 CYR61O00622 381 aa9.27□□□□□ -0.93
CLIP4-208ENST00000456385 MBTPS2O43462 519 aa9.27□□□□□ -0.93
CLIP4-208ENST00000456385 MED6O75586 246 aa9.27□□□□□ -0.93
CLIP4-208ENST00000456385 CSTAP01040 98 aa9.27□□□□□ -0.93
CLIP4-208ENST00000456385 CD5P06127 495 aa9.27□□□□□ -0.93
CLIP4-208ENST00000456385 CEACAM5P06731 702 aa9.27□□□□□ -0.93
CLIP4-208ENST00000456385 GRK6P43250 576 aa9.27□□□□□ -0.93
CLIP4-208ENST00000456385 OR2B8PP59922 312 aa9.27□□□□□ -0.93
CLIP4-208ENST00000456385 HTRA3P83110 453 aa9.27□□□□□ -0.93
CLIP4-208ENST00000456385 EGR3Q06889 387 aa9.27□□□□□ -0.93
CLIP4-208ENST00000456385 PNLIPRP3Q17RR3 467 aa9.27□□□□□ -0.93
CLIP4-208ENST00000456385 KLHL26Q53HC5 615 aa9.27□□□□□ -0.93
CLIP4-208ENST00000456385 FAM76BQ5HYJ3 339 aa9.27□□□□□ -0.93
CLIP4-208ENST00000456385 ZNF550Q7Z398 422 aa9.27□□□□□ -0.93
CLIP4-208ENST00000456385 ZNF561Q8N587 486 aa9.27□□□□□ -0.93
CLIP4-208ENST00000456385 LRRC75AQ8NAA5 344 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms