RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 RFPL4BQ6ZWI9 263 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 GLB1L2Q8IW92 636 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 YIPF5Q969M3 257 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 C4orf45Q96LM5 186 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 ERMAPQ96PL5 475 aaPredicted RBP18.13■□□□□ 0.49
HMGB3-205ENST00000455596 SOX7Q9BT81 388 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 OR2J1Q9GZK6 312 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 OR52D1Q9H346 318 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 ZNF275Q9NSD4 429 aaPredicted RBP18.13■□□□□ 0.49
HMGB3-205ENST00000455596 NKIRAS2Q9NYR9 191 aa18.13■□□□□ 0.49
HMGB3-205ENST00000455596 IMPA2O14732 288 aa18.12■□□□□ 0.49
HMGB3-205ENST00000455596 SGCEO43556 437 aa18.12■□□□□ 0.49
HMGB3-205ENST00000455596 FAM157CP0CG43 387 aa18.12■□□□□ 0.49
HMGB3-205ENST00000455596 IGFBP5P24593 272 aa18.12■□□□□ 0.49
HMGB3-205ENST00000455596 IL2RGP31785 369 aa18.12■□□□□ 0.49
HMGB3-205ENST00000455596 CDKN2AP42771 156 aaKnown RBP18.12■□□□□ 0.49
HMGB3-205ENST00000455596 TMEM33P57088 247 aa18.12■□□□□ 0.49
HMGB3-205ENST00000455596 LSM6P62312 80 aaKnown RBP18.12■□□□□ 0.49
HMGB3-205ENST00000455596 CCL8P80075 99 aa18.12■□□□□ 0.49
HMGB3-205ENST00000455596 MTX3Q5HYI7 312 aa18.12■□□□□ 0.49
HMGB3-205ENST00000455596 DNM1P34Q6PK57 102 aa18.12■□□□□ 0.49
HMGB3-205ENST00000455596 ARHGAP24Q8N264 748 aa18.12■□□□□ 0.49
HMGB3-205ENST00000455596 CCDC197Q8NCU1 140 aa18.12■□□□□ 0.49
HMGB3-205ENST00000455596 KLF14Q8TD94 323 aaPredicted RBP18.12■□□□□ 0.49
HMGB3-205ENST00000455596 GNPDA2Q8TDQ7 276 aa18.12■□□□□ 0.49
HMGB3-205ENST00000455596 IPCEF1Q8WWN9 437 aaPredicted RBP18.12■□□□□ 0.49
HMGB3-205ENST00000455596 NUAK2Q9H093 628 aa18.12■□□□□ 0.49
HMGB3-205ENST00000455596 H3BSA7 217 aa18.11■□□□□ 0.49
HMGB3-205ENST00000455596 TPD52L2O43399 206 aaKnown RBP18.11■□□□□ 0.49
HMGB3-205ENST00000455596 ABHD16AO95870 558 aa18.11■□□□□ 0.49
HMGB3-205ENST00000455596 NGFP01138 241 aa18.11■□□□□ 0.49
HMGB3-205ENST00000455596 CALB2P22676 271 aa18.11■□□□□ 0.49
HMGB3-205ENST00000455596 CRABP1P29762 137 aa18.11■□□□□ 0.49
HMGB3-205ENST00000455596 MPV17P39210 176 aa18.11■□□□□ 0.49
HMGB3-205ENST00000455596 HTR5AP47898 357 aa18.11■□□□□ 0.49
HMGB3-205ENST00000455596 ZNF81P51508 661 aa18.11■□□□□ 0.49
HMGB3-205ENST00000455596 C1orf94Q6P1W5 598 aa18.11■□□□□ 0.49
HMGB3-205ENST00000455596 JAZF1Q86VZ6 243 aa18.11■□□□□ 0.49
HMGB3-205ENST00000455596 MUC13Q9H3R2 512 aa18.11■□□□□ 0.49
HMGB3-205ENST00000455596 DECR2Q9NUI1 292 aa18.11■□□□□ 0.49
HMGB3-205ENST00000455596 PLEK2Q9NYT0 353 aa18.11■□□□□ 0.49
HMGB3-205ENST00000455596 PLSCR5A0PG75 271 aa18.1■□□□□ 0.49
HMGB3-205ENST00000455596 ARPC3O15145 178 aa18.1■□□□□ 0.49
HMGB3-205ENST00000455596 RP2O75695 350 aa18.1■□□□□ 0.49
HMGB3-205ENST00000455596 KRT36O76013 467 aa18.1■□□□□ 0.49
HMGB3-205ENST00000455596 MPZL1O95297 269 aa18.1■□□□□ 0.49
HMGB3-205ENST00000455596 ATP6V1B2P21281 511 aa18.1■□□□□ 0.49
HMGB3-205ENST00000455596 GSSP48637 474 aa18.1■□□□□ 0.49
HMGB3-205ENST00000455596 TEKQ02763 1124 aa18.1■□□□□ 0.49
HMGB3-205ENST00000455596 PGM2L1Q6PCE3 622 aa18.1■□□□□ 0.49
HMGB3-205ENST00000455596 VASH1Q7L8A9 365 aaPredicted RBP18.1■□□□□ 0.49
HMGB3-205ENST00000455596 LINC01356Q8N9X3 169 aa18.1■□□□□ 0.49
HMGB3-205ENST00000455596 GTF3AQ92664 365 aaKnown RBP18.1■□□□□ 0.49
HMGB3-205ENST00000455596 IFT27Q9BW83 186 aa18.1■□□□□ 0.49
HMGB3-205ENST00000455596 ASH2LQ9UBL3 628 aa18.1■□□□□ 0.49
HMGB3-205ENST00000455596 JMJD1CQ15652 2540 aa18.1■□□□□ 0.49
HMGB3-205ENST00000455596 PPIHO43447 177 aaKnown RBP18.09■□□□□ 0.49
HMGB3-205ENST00000455596 CDC14BO60729 498 aa18.09■□□□□ 0.49
HMGB3-205ENST00000455596 RENP00797 406 aa18.09■□□□□ 0.49
HMGB3-205ENST00000455596 NOS3P29474 1203 aa18.09■□□□□ 0.49
HMGB3-205ENST00000455596 LIPAP38571 399 aa18.09■□□□□ 0.49
HMGB3-205ENST00000455596 CENPAP49450 140 aa18.09■□□□□ 0.49
HMGB3-205ENST00000455596 MMP15P51511 669 aa18.09■□□□□ 0.49
HMGB3-205ENST00000455596 TSPAN31Q12999 210 aa18.09■□□□□ 0.49
HMGB3-205ENST00000455596 CCNIQ14094 377 aa18.09■□□□□ 0.49
HMGB3-205ENST00000455596 KCNMB1Q16558 191 aa18.09■□□□□ 0.49
HMGB3-205ENST00000455596 TSTQ16762 297 aaKnown RBP18.09■□□□□ 0.49
HMGB3-205ENST00000455596 TMEM255AQ5JRV8 349 aa18.09■□□□□ 0.49
HMGB3-205ENST00000455596 OTPQ5XKR4 325 aa18.09■□□□□ 0.49
HMGB3-205ENST00000455596 PGBD2Q6P3X8 592 aa18.09■□□□□ 0.49
HMGB3-205ENST00000455596 LEG1Q6P5S2 330 aa18.09■□□□□ 0.49
HMGB3-205ENST00000455596 RINLQ6ZS11 566 aa18.09■□□□□ 0.49
HMGB3-205ENST00000455596 NPEPL1Q8NDH3 523 aa18.09■□□□□ 0.49
HMGB3-205ENST00000455596 SAMD8Q96LT4 415 aa18.09■□□□□ 0.49
HMGB3-205ENST00000455596 TSSK2Q96PF2 358 aa18.09■□□□□ 0.49
HMGB3-205ENST00000455596 SAP30LQ9HAJ7 183 aa18.09■□□□□ 0.49
HMGB3-205ENST00000455596 CYSLTR2Q9NS75 346 aa18.09■□□□□ 0.49
HMGB3-205ENST00000455596 TBCCD1Q9NVR7 557 aa18.09■□□□□ 0.49
HMGB3-205ENST00000455596 CGGBP1Q9UFW8 167 aaPredicted RBP18.09■□□□□ 0.49
HMGB3-205ENST00000455596 POLR1DQ9Y2S0 133 aa18.09■□□□□ 0.49
HMGB3-205ENST00000455596 LYVE1Q9Y5Y7 322 aa18.09■□□□□ 0.49
HMGB3-205ENST00000455596 IGHV1-69-2A0A0G2JMI3 117 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 TNFRSF11BO00300 401 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 HIST1H1CP16403 213 aaKnown RBP18.08■□□□□ 0.48
HMGB3-205ENST00000455596 HNF1AP20823 631 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 GSTM3P21266 225 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 TUBG1P23258 451 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 CRYBB2P43320 205 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 HMGA2P52926 109 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 CDH15P55291 814 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 FAM209AQ5JX71 171 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 FAM120AOSQ5T036 256 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 LCN8Q6JVE9 175 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 ZNF620Q6ZNG0 422 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 DHFR2Q86XF0 187 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 LINC00471Q8N535 108 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 OR4K13Q8NH42 304 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 CLDND2Q8NHS1 167 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 C1orf159Q96HA4 380 aa18.08■□□□□ 0.48
HMGB3-205ENST00000455596 NMNAT3Q96T66 252 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms