RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 SDHAP31040 664 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 HTR5AP47898 357 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 LIMS1P48059 325 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 MVKQ03426 396 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 KRR1Q13601 381 aaKnown RBP10.98□□□□□ -0.65
CHD3-206ENST00000452447 ZMAT1Q5H9K5 638 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 LIPNQ5VXI9 398 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 RINLQ6ZS11 566 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 OR51F2Q8NH61 342 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 BCAS4Q8TDM0 211 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 GTF3AQ92664 365 aaKnown RBP10.98□□□□□ -0.65
CHD3-206ENST00000452447 TMEM186Q96B77 213 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 ELMOD3Q96FG2 381 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 TIMD4Q96H15 378 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 RSRC1Q96IZ7 334 aaKnown RBP10.98□□□□□ -0.65
CHD3-206ENST00000452447 C7orf34Q96L11 122 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 EGLN1Q9GZT9 426 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 SYT4Q9H2B2 425 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 GORASP2Q9H8Y8 452 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 NRIP3Q9NQ35 241 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 HIF1ANQ9NWT6 349 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 CGGBP1Q9UFW8 167 aaPredicted RBP10.98□□□□□ -0.65
CHD3-206ENST00000452447 IL20RAQ9UHF4 553 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 GRIP1Q9Y3R0 1128 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 V9GYQ6 96 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 ANK2Q01484 3957 aa10.98□□□□□ -0.65
CHD3-206ENST00000452447 DYSFO75923 2080 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 TRBV4-1A0A0J9YWV2 114 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 UNC119BA6NIH7 251 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 FAM157AC9JC47 383 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 DOK2O60496 412 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 SLC16A7O60669 478 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 SCG5P05408 212 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 COX5BP10606 129 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 CTLA4P16410 223 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 OMPP47874 163 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 MMP15P51511 669 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 SMIM11AP58511 58 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 CBX1P83916 185 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 AQP6Q13520 282 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 AVPI1Q5T686 147 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 DPY19L2P2Q6ZN68 376 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 ZER1Q7Z7L7 766 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 ADCK1Q86TW2 530 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 GLB1L2Q8IW92 636 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 FAM86B1Q8N7N1 296 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 CCL17Q92583 94 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 RAB1CQ92928 201 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 MCUR1Q96AQ8 359 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 RASD2Q96D21 266 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 PYURFQ96I23 114 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 TBCCD1Q9NVR7 557 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 PLEK2Q9NYT0 353 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 MAGEL2Q9UJ55 1249 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 ZDHHC8Q9ULC8 765 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 IER3IP1Q9Y5U9 82 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 FBN3Q75N90 2809 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 ARHGAP32A7KAX9 2087 aa10.97□□□□□ -0.65
CHD3-206ENST00000452447 SOCS2O14508 198 aa10.96□□□□□ -0.65
CHD3-206ENST00000452447 TIMM8AO60220 97 aaPredicted RBP10.96□□□□□ -0.65
CHD3-206ENST00000452447 KHDRBS3O75525 346 aaKnown RBP10.96□□□□□ -0.65
CHD3-206ENST00000452447 IGHV1-46P01743 117 aa10.96□□□□□ -0.65
CHD3-206ENST00000452447 GSTM3P21266 225 aa10.96□□□□□ -0.65
CHD3-206ENST00000452447 RPS6KA3P51812 740 aa10.96□□□□□ -0.65
CHD3-206ENST00000452447 LMO4P61968 165 aa10.96□□□□□ -0.65
CHD3-206ENST00000452447 SEC23BQ15437 767 aa10.96□□□□□ -0.65
CHD3-206ENST00000452447 KRTAP24-1Q3LI83 254 aa10.96□□□□□ -0.65
CHD3-206ENST00000452447 SAMD4BQ5PRF9 694 aaKnown RBP10.96□□□□□ -0.65
CHD3-206ENST00000452447 RFLNBQ8N5W9 214 aa10.96□□□□□ -0.65
CHD3-206ENST00000452447 NPEPL1Q8NDH3 523 aa10.96□□□□□ -0.65
CHD3-206ENST00000452447 RAB39BQ96DA2 213 aa10.96□□□□□ -0.65
CHD3-206ENST00000452447 CCT8L2Q96SF2 557 aa10.96□□□□□ -0.65
CHD3-206ENST00000452447 DIRC2Q96SL1 478 aa10.96□□□□□ -0.65
CHD3-206ENST00000452447 GPX7Q96SL4 187 aaPredicted RBP10.96□□□□□ -0.65
CHD3-206ENST00000452447 ZNF665Q9H7R5 613 aa10.96□□□□□ -0.65
CHD3-206ENST00000452447 VSX1Q9NZR4 365 aaPredicted RBP10.96□□□□□ -0.65
CHD3-206ENST00000452447 ASH2LQ9UBL3 628 aa10.96□□□□□ -0.65
CHD3-206ENST00000452447 COA3Q9Y2R0 106 aaPredicted RBP10.96□□□□□ -0.65
CHD3-206ENST00000452447 POLR1DQ9Y2S0 133 aa10.96□□□□□ -0.65
CHD3-206ENST00000452447 WIPI2Q9Y4P8 454 aa10.96□□□□□ -0.65
CHD3-206ENST00000452447 CACNG2Q9Y698 323 aa10.96□□□□□ -0.65
CHD3-206ENST00000452447 ZSCAN5BA6NJL1 495 aa10.95□□□□□ -0.66
CHD3-206ENST00000452447 TCF21O43680 179 aa10.95□□□□□ -0.66
CHD3-206ENST00000452447 GADD45GO95257 159 aa10.95□□□□□ -0.66
CHD3-206ENST00000452447 TUBG1P23258 451 aa10.95□□□□□ -0.66
CHD3-206ENST00000452447 CENPAP49450 140 aa10.95□□□□□ -0.66
CHD3-206ENST00000452447 LSM6P62312 80 aaKnown RBP10.95□□□□□ -0.66
CHD3-206ENST00000452447 SRSF2Q01130 221 aaKnown RBP10.95□□□□□ -0.66
CHD3-206ENST00000452447 SPIBQ01892 262 aa10.95□□□□□ -0.66
CHD3-206ENST00000452447 SLC3A1Q07837 685 aa10.95□□□□□ -0.66
CHD3-206ENST00000452447 MTX3Q5HYI7 312 aa10.95□□□□□ -0.66
CHD3-206ENST00000452447 ACSM5Q6NUN0 579 aa10.95□□□□□ -0.66
CHD3-206ENST00000452447 C1orf94Q6P1W5 598 aa10.95□□□□□ -0.66
CHD3-206ENST00000452447 FAHD2BQ6P2I3 314 aaPredicted RBP10.95□□□□□ -0.66
CHD3-206ENST00000452447 SHQ1Q6PI26 577 aaKnown RBP10.95□□□□□ -0.66
CHD3-206ENST00000452447 DNM1P34Q6PK57 102 aa10.95□□□□□ -0.66
CHD3-206ENST00000452447 SMARCD3Q6STE5 483 aa10.95□□□□□ -0.66
CHD3-206ENST00000452447 THSD4Q6ZMP0 1018 aa10.95□□□□□ -0.66
CHD3-206ENST00000452447 VASH1Q7L8A9 365 aaPredicted RBP10.95□□□□□ -0.66
CHD3-206ENST00000452447 PEG10Q86TG7 708 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms