RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 ADAMTS18Q8TE60 1221 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 C2orf15Q8WU43 125 aaKnown RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 PPP1R1CQ8WVI7 109 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 SUSD6Q92537 303 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 MRPL24Q96A35 216 aaKnown RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 WDR89Q96FK6 387 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 ABHD14BQ96IU4 210 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 TOX2Q96NM4 488 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 OR2A7Q96R45 310 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 ATOH8Q96SQ7 321 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 NPY6RQ99463 290 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 COL25A1Q9BXS0 654 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 SMOC2Q9H3U7 446 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 SYNPO2LQ9H987 977 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 DNAJC4Q9NNZ3 241 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 RAB9BQ9NP90 201 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 B3GAT2Q9NPZ5 323 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 SERINC1Q9NRX5 453 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 GLRX2Q9NS18 164 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 SLC39A9Q9NUM3 307 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 SIRT5Q9NXA8 310 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 FTSJ1Q9UET6 329 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 TRAPPC2LQ9UL33 140 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 B3GALT5Q9Y2C3 310 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 PSME4Q14997 1843 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 CROCCQ5TZA2 2017 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 TRBV23-1A0A0A0MS06 115 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 A0A1B0GW64 132 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 GPR182O15218 404 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 HCRTR1O43613 425 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 NME2P1O60361 137 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 SCGB2A1O75556 95 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 GLSO94925 669 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 PCDH8O95206 1070 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 MPC2O95563 127 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 GASTP01350 101 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 CD8AP01732 235 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 SOD2P04179 222 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 PNMTP11086 282 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 CXCL2P19875 107 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 AGAP20933 346 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 GPX4P36969 197 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 GPR12P47775 334 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 OR1E2P47887 323 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 CDC34P49427 236 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 GNG4P50150 75 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 CNN1P51911 297 aaKnown RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 ZNF136P52737 540 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 LSM11P83369 360 aaKnown RBP eCLIP2.02□□□□□ -2.09
USP53-202ENST00000450251 OC90Q02509 493 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 EFEMP1Q12805 493 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 SLC10A2Q12908 348 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 JOSD1Q15040 202 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 SSX1Q16384 188 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 RPEL1Q2QD12 228 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 LINC00303Q3SY05 128 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 PLAC9Q5JTB6 97 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 FAM182AQ5T1J6 154 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 C9orf57Q5W0N0 161 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 CST9LP1Q5W188 147 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 KIAA0895LQ68EN5 471 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 CDC42EP5Q6NZY7 148 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 PODNL1Q6PEZ8 512 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 FBXW12Q6X9E4 464 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 SLC25A26Q70HW3 274 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 PIM3Q86V86 326 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 PHYKPLQ8IUZ5 450 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 ARL14EPQ8N8R7 260 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 OR51T1Q8NGJ9 327 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 BCL2L2Q92843 193 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 SMIM19Q96E16 107 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 FCRL2Q96LA5 508 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 SMIM7Q9BQ49 75 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 TXNDC17Q9BRA2 123 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 NICN1Q9BSH3 213 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 C20orf24Q9BUV8 137 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 GPR174Q9BXC1 333 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 OR2J1Q9GZK6 312 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 PLEKHF2Q9H8W4 249 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 PLEKHA3Q9HB20 300 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 SLC6A13Q9NSD5 602 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 RNF19AQ9NV58 838 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 NECAP2Q9NVZ3 263 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 P4HTMQ9NXG6 502 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 SPG21Q9NZD8 308 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 MTFP1Q9UDX5 166 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 PISDQ9UG56 409 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 AMDHD2Q9Y303 409 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 DOT1LQ8TEK3 1739 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 KIAA1551Q9HCM1 1747 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 TRAV30A0A087WSZ9 112 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 LOC102723971A0A1B0GUV8 181 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 TCRBV16S1A1N1A0A5B0 115 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 C1orf226A1L170 272 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 GAGE10A6NGK3 116 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 OR6C76A6NM76 312 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 IFITM5A6NNB3 132 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 H3BMH7 237 aa2.02□□□□□ -2.09
USP53-202ENST00000450251 FOXE1O00358 373 aaPredicted RBP2.02□□□□□ -2.09
USP53-202ENST00000450251 GFRA2O00451 464 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms