RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 TRGV8A0A0C4DH27 118 aa16.89■□□□□ 0.29
RPS28-202ENST00000449223 MSTNO14793 375 aa16.89■□□□□ 0.29
RPS28-202ENST00000449223 SEC14L2O76054 403 aa16.89■□□□□ 0.29
RPS28-202ENST00000449223 IGHV1-2P23083 117 aa16.89■□□□□ 0.29
RPS28-202ENST00000449223 TTKP33981 857 aa16.89■□□□□ 0.29
RPS28-202ENST00000449223 PCBD1P61457 104 aa16.89■□□□□ 0.29
RPS28-202ENST00000449223 MLLT11Q13015 90 aaPredicted RBP16.89■□□□□ 0.29
RPS28-202ENST00000449223 MRPL28Q13084 256 aaKnown RBP16.89■□□□□ 0.29
RPS28-202ENST00000449223 RAB39AQ14964 217 aa16.89■□□□□ 0.29
RPS28-202ENST00000449223 MED22Q15528 200 aa16.89■□□□□ 0.29
RPS28-202ENST00000449223 KLHL24Q6TFL4 600 aa16.89■□□□□ 0.29
RPS28-202ENST00000449223 VASH1Q7L8A9 365 aaPredicted RBP16.89■□□□□ 0.29
RPS28-202ENST00000449223 DPPA2Q7Z7J5 298 aa16.89■□□□□ 0.29
RPS28-202ENST00000449223 LINC00346Q8IVM7 164 aa16.89■□□□□ 0.29
RPS28-202ENST00000449223 ZNF610Q8N9Z0 462 aa16.89■□□□□ 0.29
RPS28-202ENST00000449223 GALNT11Q8NCW6 608 aa16.89■□□□□ 0.29
RPS28-202ENST00000449223 GJC3Q8NFK1 279 aa16.89■□□□□ 0.29
RPS28-202ENST00000449223 OR13F1Q8NGS4 319 aa16.89■□□□□ 0.29
RPS28-202ENST00000449223 OR2AJ1Q8NGZ0 328 aa16.89■□□□□ 0.29
RPS28-202ENST00000449223 SPRYD4Q8WW59 207 aaPredicted RBP16.89■□□□□ 0.29
RPS28-202ENST00000449223 RND1Q92730 232 aa16.89■□□□□ 0.29
RPS28-202ENST00000449223 FBXO17Q96EF6 278 aa16.89■□□□□ 0.29
RPS28-202ENST00000449223 MGLLQ99685 303 aa16.89■□□□□ 0.29
RPS28-202ENST00000449223 ISG20L2Q9H9L3 353 aaKnown RBP16.89■□□□□ 0.29
RPS28-202ENST00000449223 PNRC2Q9NPJ4 139 aaKnown RBP16.89■□□□□ 0.29
RPS28-202ENST00000449223 DDX28Q9NUL7 540 aaKnown RBP16.89■□□□□ 0.29
RPS28-202ENST00000449223 BABAM2Q9NXR7 383 aa16.89■□□□□ 0.29
RPS28-202ENST00000449223 ZNF224Q9NZL3 707 aa16.89■□□□□ 0.29
RPS28-202ENST00000449223 MRM2Q9UI43 246 aaKnown RBP16.89■□□□□ 0.29
RPS28-202ENST00000449223 NBASA2RRP1 2371 aa16.89■□□□□ 0.29
RPS28-202ENST00000449223 METTL15A6NJ78 407 aa16.88■□□□□ 0.29
RPS28-202ENST00000449223 ZNF254O75437 659 aa16.88■□□□□ 0.29
RPS28-202ENST00000449223 DCTDP32321 178 aa16.88■□□□□ 0.29
RPS28-202ENST00000449223 OPRL1P41146 370 aa16.88■□□□□ 0.29
RPS28-202ENST00000449223 OR12D2P58182 307 aa16.88■□□□□ 0.29
RPS28-202ENST00000449223 TIGD6Q17RP2 521 aa16.88■□□□□ 0.29
RPS28-202ENST00000449223 CORO6Q6QEF8 472 aa16.88■□□□□ 0.29
RPS28-202ENST00000449223 CFAP77Q6ZQR2 320 aa16.88■□□□□ 0.29
RPS28-202ENST00000449223 MRGPRGQ86SM5 289 aa16.88■□□□□ 0.29
RPS28-202ENST00000449223 SKA3Q8IX90 412 aa16.88■□□□□ 0.29
RPS28-202ENST00000449223 CCDC36Q8IYA8 594 aa16.88■□□□□ 0.29
RPS28-202ENST00000449223 LRRC18Q8N456 261 aa16.88■□□□□ 0.29
RPS28-202ENST00000449223 ZNF433Q8N7K0 673 aaPredicted RBP16.88■□□□□ 0.29
RPS28-202ENST00000449223 OR10S1Q8NGN2 331 aa16.88■□□□□ 0.29
RPS28-202ENST00000449223 BCL2L2Q92843 193 aaPredicted RBP16.88■□□□□ 0.29
RPS28-202ENST00000449223 PELI1Q96FA3 418 aa16.88■□□□□ 0.29
RPS28-202ENST00000449223 OPALINQ96PE5 141 aa16.88■□□□□ 0.29
RPS28-202ENST00000449223 BBC3Q96PG8 261 aaPredicted RBP16.88■□□□□ 0.29
RPS28-202ENST00000449223 MROQ9BYG7 248 aa16.88■□□□□ 0.29
RPS28-202ENST00000449223 OPN3Q9H1Y3 402 aaPredicted RBP16.88■□□□□ 0.29
RPS28-202ENST00000449223 BATF3Q9NR55 127 aa16.88■□□□□ 0.29
RPS28-202ENST00000449223 JKAMPQ9P055 326 aa16.88■□□□□ 0.29
RPS28-202ENST00000449223 SH3BGRL2Q9UJC5 107 aa16.88■□□□□ 0.29
RPS28-202ENST00000449223 OSGIN2Q9Y236 505 aa16.88■□□□□ 0.29
RPS28-202ENST00000449223 LALBAP00709 142 aa16.87■□□□□ 0.29
RPS28-202ENST00000449223 KRT8P05787 483 aa16.87■□□□□ 0.29
RPS28-202ENST00000449223 MMP7P09237 267 aaPredicted RBP16.87■□□□□ 0.29
RPS28-202ENST00000449223 TACSTD2P09758 323 aa16.87■□□□□ 0.29
RPS28-202ENST00000449223 HOXB1P14653 301 aaPredicted RBP16.87■□□□□ 0.29
RPS28-202ENST00000449223 TAS2R43P59537 309 aa16.87■□□□□ 0.29
RPS28-202ENST00000449223 SCRN3Q0VDG4 424 aa16.87■□□□□ 0.29
RPS28-202ENST00000449223 SLC16A14Q7RTX9 510 aa16.87■□□□□ 0.29
RPS28-202ENST00000449223 RPS4Y2Q8TD47 263 aa16.87■□□□□ 0.29
RPS28-202ENST00000449223 GATAD2BQ8WXI9 593 aa16.87■□□□□ 0.29
RPS28-202ENST00000449223 SLAMF6Q96DU3 332 aa16.87■□□□□ 0.29
RPS28-202ENST00000449223 SH3GL3Q99963 347 aa16.87■□□□□ 0.29
RPS28-202ENST00000449223 TRIM36Q9NQ86 728 aa16.87■□□□□ 0.29
RPS28-202ENST00000449223 SLCO1C1Q9NYB5 712 aa16.87■□□□□ 0.29
RPS28-202ENST00000449223 A8MXE2 369 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 ZNF878C9JN71 531 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 RER1O15258 196 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 WNT11O96014 354 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 PSMB9P28065 219 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 TGM4P49221 684 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 MRPL49Q13405 166 aaKnown RBP16.86■□□□□ 0.29
RPS28-202ENST00000449223 GABRA6Q16445 453 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 CCDC58Q4VC31 144 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 TP53I3Q53FA7 332 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 ARMCX4Q5H9R4 360 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 OR7E24Q6IFN5 339 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 ZNF474Q6S9Z5 364 aaPredicted RBP16.86■□□□□ 0.29
RPS28-202ENST00000449223 FAM220AQ7Z4H9 259 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 C17orf78Q8N4C9 275 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 RNF166Q96A37 237 aaPredicted RBP16.86■□□□□ 0.29
RPS28-202ENST00000449223 TTTY10Q9BZA0 68 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 KCNN2Q9H2S1 579 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 NIPAL2Q9H841 368 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 ACOXLQ9NUZ1 547 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 ATPIF1Q9UII2 106 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 TIMM10BQ9Y5J6 103 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 J3QLW9 94 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 DVL2O14641 736 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 ZNF19P17023 458 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 GPR50Q13585 617 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 TPBGQ13641 420 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 SLC36A2Q495M3 483 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 C1QTNF12Q5T7M4 302 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 C9orf135Q5VTT2 229 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 LIPNQ5VXI9 398 aa16.86■□□□□ 0.29
RPS28-202ENST00000449223 FDX2Q6P4F2 183 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms