RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 LYPD6Q86Y78 171 aa15.15■□□□□ 0.02
TOM1-210ENST00000449058 OR51A2Q8NGJ7 313 aa15.15■□□□□ 0.02
TOM1-210ENST00000449058 OR13C3Q8NGS6 347 aa15.15■□□□□ 0.02
TOM1-210ENST00000449058 RNF138Q8WVD3 245 aa15.15■□□□□ 0.02
TOM1-210ENST00000449058 PNPLA2Q96AD5 504 aa15.15■□□□□ 0.02
TOM1-210ENST00000449058 ELMOD3Q96FG2 381 aa15.15■□□□□ 0.02
TOM1-210ENST00000449058 NPIPA1Q9UND3 350 aa15.15■□□□□ 0.02
TOM1-210ENST00000449058 LOC107986453A0A1B0GWG9 222 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 LOC390937A0A1W2PQ73 354 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 OR6C65A6NJZ3 312 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 MCRIP1C9JLW8 97 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 DOK2O60496 412 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 LPLP06858 475 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 NFYAP23511 347 aaPredicted RBP15.14■□□□□ 0.01
TOM1-210ENST00000449058 AFF3P51826 1226 aaKnown RBP15.14■□□□□ 0.01
TOM1-210ENST00000449058 C2orf68Q2NKX9 166 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 GABRG1Q8N1C3 465 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 OR5M1Q8NGP8 315 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 NUBPLQ8TB37 319 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 DUSP15Q9H1R2 295 aaPredicted RBP15.14■□□□□ 0.01
TOM1-210ENST00000449058 CHST11Q9NPF2 352 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 CGGBP1Q9UFW8 167 aaPredicted RBP15.14■□□□□ 0.01
TOM1-210ENST00000449058 OPN4Q9UHM6 478 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 LAMA1P25391 3075 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 IGKV1D-43A0A0B4J1Z2 117 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 BCAT2O15382 392 aaPredicted RBP15.14■□□□□ 0.01
TOM1-210ENST00000449058 ZNF208O43345 1280 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 H2BFSP57053 126 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 HSF1Q00613 529 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 FAM209AQ5JX71 171 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 C1orf100Q5SVJ3 147 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 ARSKQ6UWY0 536 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 ZNF704Q6ZNC4 412 aaPredicted RBP15.14■□□□□ 0.01
TOM1-210ENST00000449058 RABEPKQ7Z6M1 372 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 ADGRE4PQ86SQ3 457 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 MUC20Q8N307 709 aaPredicted RBP15.14■□□□□ 0.01
TOM1-210ENST00000449058 TMEM229BQ8NBD8 167 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 OR2AK2Q8NG84 335 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 DVL3Q92997 716 aaPredicted RBP15.14■□□□□ 0.01
TOM1-210ENST00000449058 GSX2Q9BZM3 304 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 ALX4Q9H161 411 aaPredicted RBP15.14■□□□□ 0.01
TOM1-210ENST00000449058 SCPEP1Q9HB40 452 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 APMAPQ9HDC9 416 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 RHBDD3Q9Y3P4 386 aa15.14■□□□□ 0.01
TOM1-210ENST00000449058 ARID1BQ8NFD5 2236 aaPredicted RBP15.14■□□□□ 0.01
TOM1-210ENST00000449058 A0A0A6YYH2 397 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 A6NJ64 397 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 L7N2F9 121 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 ETV2O00321 342 aaPredicted RBP15.13■□□□□ 0.01
TOM1-210ENST00000449058 HRGP04196 525 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 ITGB2P05107 769 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 DNASE1L1P49184 302 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 LRFN4Q6PJG9 635 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 LINC00346Q8IVM7 164 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 SLC38A9Q8NBW4 561 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 SFXN2Q96NB2 322 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 C1orf198Q9H425 327 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 MED11Q9P086 117 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 TMEM269A0A1B0GVZ9 245 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 TUBAL3A6NHL2 446 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 TMEM200CA6NKL6 621 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 MEN1O00255 615 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 TOX3O15405 576 aaPredicted RBP15.13■□□□□ 0.01
TOM1-210ENST00000449058 PDGFAP04085 211 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 FOSL2P15408 326 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 TAS2R19P59542 299 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 POU3F1Q03052 451 aaPredicted RBP15.13■□□□□ 0.01
TOM1-210ENST00000449058 TLE3Q04726 772 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 FOXF1Q12946 379 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 TMEM244Q5VVB8 128 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 TMPRSS9Q7Z410 1059 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 COMMD7Q86VX2 200 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 OR8S1Q8NH09 359 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 THAP3Q8WTV1 239 aaPredicted RBP15.13■□□□□ 0.01
TOM1-210ENST00000449058 RNF133Q8WVZ7 376 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 PTX4Q96A99 478 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 DDIT4LQ96D03 193 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 FANCFQ9NPI8 374 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 HRH3Q9Y5N1 445 aa15.13■□□□□ 0.01
TOM1-210ENST00000449058 DCDC2BA2VCK2 349 aa15.12■□□□□ 0.01
TOM1-210ENST00000449058 HMSDA8MTL9 139 aa15.12■□□□□ 0.01
TOM1-210ENST00000449058 RRASP10301 218 aa15.12■□□□□ 0.01
TOM1-210ENST00000449058 RAB14P61106 215 aa15.12■□□□□ 0.01
TOM1-210ENST00000449058 SPOCK1Q08629 439 aa15.12■□□□□ 0.01
TOM1-210ENST00000449058 MPPED2Q15777 294 aa15.12■□□□□ 0.01
TOM1-210ENST00000449058 CDH26Q8IXH8 852 aa15.12■□□□□ 0.01
TOM1-210ENST00000449058 PCNPQ8WW12 178 aaKnown RBP15.12■□□□□ 0.01
TOM1-210ENST00000449058 POTEKPQ9BYX7 375 aa15.12■□□□□ 0.01
TOM1-210ENST00000449058 SLCO5A1Q9H2Y9 848 aa15.12■□□□□ 0.01
TOM1-210ENST00000449058 MED29Q9NX70 200 aa15.12■□□□□ 0.01
TOM1-210ENST00000449058 KLHL13Q9P2N7 655 aa15.12■□□□□ 0.01
TOM1-210ENST00000449058 VDAC3Q9Y277 283 aa15.12■□□□□ 0.01
TOM1-210ENST00000449058 PRUNE2Q8WUY3 3088 aa15.12■□□□□ 0.01
TOM1-210ENST00000449058 LIPT2A6NK58 231 aa15.12■□□□□ 0.01
TOM1-210ENST00000449058 CCDC85CA6NKD9 419 aa15.12■□□□□ 0.01
TOM1-210ENST00000449058 LMX1BO60663 402 aa15.12■□□□□ 0.01
TOM1-210ENST00000449058 RGS11O94810 467 aa15.12■□□□□ 0.01
TOM1-210ENST00000449058 SIX6O95475 246 aa15.12■□□□□ 0.01
TOM1-210ENST00000449058 FCER2P06734 321 aa15.12■□□□□ 0.01
TOM1-210ENST00000449058 HEXBP07686 556 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms