RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 HTR5AP47898 357 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 BLVRAP53004 296 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 PTGES3Q15185 160 aaKnown RBP12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 TESK1Q15569 626 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 SNAPC1Q16533 368 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 MEP1BQ16820 701 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 TMEM236Q5W0B7 351 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 OTPQ5XKR4 325 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 KDM4DQ6B0I6 523 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 CPEB3Q8NE35 698 aaKnown RBP12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 GJC3Q8NFK1 279 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 OR51L1Q8NGJ5 315 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 OR6K6Q8NGW6 343 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 PERPQ96FX8 193 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 GRIP2Q9C0E4 1043 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 HEATR1Q9H583 2144 aaKnown RBP12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 TVP23BQ9NYZ1 205 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 KCNG2Q9UJ96 466 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 CMAHPQ9Y471 501 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 PMF1-BGLAPU3KQ54 211 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 ROS1P08922 2347 aa12.12□□□□□ -0.47
GTF3C3-206ENST00000448539 FAM183AA6NL82 134 aa12.11□□□□□ -0.47
GTF3C3-206ENST00000448539 SNAP29O95721 258 aa12.11□□□□□ -0.47
GTF3C3-206ENST00000448539 TFP02787 698 aa12.11□□□□□ -0.47
GTF3C3-206ENST00000448539 GYPBP06028 91 aa12.11□□□□□ -0.47
GTF3C3-206ENST00000448539 OR4A8P0C604 315 aa12.11□□□□□ -0.47
GTF3C3-206ENST00000448539 FAM157BP0CG42 384 aa12.11□□□□□ -0.47
GTF3C3-206ENST00000448539 COX5BP10606 129 aa12.11□□□□□ -0.47
GTF3C3-206ENST00000448539 GLRXP35754 106 aa12.11□□□□□ -0.47
GTF3C3-206ENST00000448539 SNRPD2P62316 118 aaKnown RBP12.11□□□□□ -0.47
GTF3C3-206ENST00000448539 ADAM8P78325 824 aa12.11□□□□□ -0.47
GTF3C3-206ENST00000448539 NKX6-1P78426 367 aaPredicted RBP12.11□□□□□ -0.47
GTF3C3-206ENST00000448539 ARL9Q6T311 187 aa12.11□□□□□ -0.47
GTF3C3-206ENST00000448539 LRRC75A-AS1Q8N1F1 130 aa12.11□□□□□ -0.47
GTF3C3-206ENST00000448539 PAQR4Q8N4S7 273 aaPredicted RBP12.11□□□□□ -0.47
GTF3C3-206ENST00000448539 POM121L2Q96KW2 1035 aa12.11□□□□□ -0.47
GTF3C3-206ENST00000448539 CIB1Q99828 191 aa12.11□□□□□ -0.47
GTF3C3-206ENST00000448539 NMNAT2Q9BZQ4 307 aa12.11□□□□□ -0.47
GTF3C3-206ENST00000448539 BCL2L14Q9BZR8 327 aa12.11□□□□□ -0.47
GTF3C3-206ENST00000448539 OR51V1Q9H2C8 321 aa12.11□□□□□ -0.47
GTF3C3-206ENST00000448539 OR51B6Q9H340 312 aa12.11□□□□□ -0.47
GTF3C3-206ENST00000448539 ANKRD17O75179 2603 aaKnown RBP12.11□□□□□ -0.47
GTF3C3-206ENST00000448539 HRNRQ86YZ3 2850 aaPredicted RBP12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 ERICH4A6NGS2 130 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 TVP23AA6NH52 213 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 B9A039 149 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 RER1O15258 196 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 CD8AP01732 235 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 LCKP06239 509 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 CLUP10909 449 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 PCSK6P29122 969 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 CDKN1AP38936 164 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 PTH2RP49190 550 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 UCP2P55851 309 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 ATP5J2P56134 94 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 SELENOVP59797 346 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 PPP2R2BQ00005 443 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 DBPQ10586 325 aaPredicted RBP12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 RAB35Q15286 201 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 ADIPOQQ15848 244 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 KLHL12Q53G59 568 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 RGS7BPQ6MZT1 257 aaPredicted RBP12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 PLBD1Q6P4A8 553 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 CORO6Q6QEF8 472 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 VASH1Q7L8A9 365 aaPredicted RBP12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 LINC00346Q8IVM7 164 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 PQLC1Q8N2U9 271 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 OR1F12Q8NHA8 337 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 IGFBPL1Q8WX77 278 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 C9orf16Q9BUW7 83 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 CACNG6Q9BXT2 260 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 GSX2Q9BZM3 304 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 PLK3Q9H4B4 646 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 RIBC2Q9H4K1 309 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 MED20Q9H944 212 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 FBXO9Q9UK97 447 aaPredicted RBP12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 LHFPL6Q9Y693 200 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 HIVEP1P15822 2718 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 DSCAMO60469 2012 aa12.1□□□□□ -0.47
GTF3C3-206ENST00000448539 RAI1Q7Z5J4 1906 aaPredicted RBP12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 LOC100509620A0A075B734 347 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 ANKRD65E5RJM6 399 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 OVOL3O00110 214 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 EI24O14681 340 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 GPRIN2O60269 458 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 GLCEO94923 617 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 ABHD16AO95870 558 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 SPARCP09486 303 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 GSTT1P30711 240 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 ENTPD1P49961 510 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 RAD23AP54725 363 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 RPS7P62081 194 aaKnown RBP12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 EFNB3Q15768 340 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 CCDC92Q53HC0 331 aaPredicted RBP12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 ELFN2Q5R3F8 820 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 C11orf71Q6IPW1 123 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 CXXC5Q7LFL8 322 aaKnown RBP12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 CPOQ8IVL8 374 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 C1orf174Q8IYL3 243 aa12.09□□□□□ -0.47
GTF3C3-206ENST00000448539 ZNF511Q8NB15 262 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms