RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 RPS6KA3P51812 740 aa16.79■□□□□ 0.28
VCP-203ENST00000448530 GNGT1P63211 74 aa16.79■□□□□ 0.28
VCP-203ENST00000448530 MXRA7P84157 204 aa16.79■□□□□ 0.28
VCP-203ENST00000448530 HFEQ30201 348 aa16.79■□□□□ 0.28
VCP-203ENST00000448530 ZMAT1Q5H9K5 638 aa16.79■□□□□ 0.28
VCP-203ENST00000448530 FAM209AQ5JX71 171 aa16.79■□□□□ 0.28
VCP-203ENST00000448530 DPY19L2P2Q6ZN68 376 aa16.79■□□□□ 0.28
VCP-203ENST00000448530 ZER1Q7Z7L7 766 aa16.79■□□□□ 0.28
VCP-203ENST00000448530 GLB1L2Q8IW92 636 aa16.79■□□□□ 0.28
VCP-203ENST00000448530 PGAM4Q8N0Y7 254 aa16.79■□□□□ 0.28
VCP-203ENST00000448530 GTF3AQ92664 365 aaKnown RBP16.79■□□□□ 0.28
VCP-203ENST00000448530 ELMOD3Q96FG2 381 aa16.79■□□□□ 0.28
VCP-203ENST00000448530 TIMD4Q96H15 378 aa16.79■□□□□ 0.28
VCP-203ENST00000448530 NSMCE2Q96MF7 247 aa16.79■□□□□ 0.28
VCP-203ENST00000448530 LRRC37BQ96QE4 947 aa16.79■□□□□ 0.28
VCP-203ENST00000448530 GPX7Q96SL4 187 aaPredicted RBP16.79■□□□□ 0.28
VCP-203ENST00000448530 EGLN1Q9GZT9 426 aa16.79■□□□□ 0.28
VCP-203ENST00000448530 RACGAP1Q9H0H5 632 aa16.79■□□□□ 0.28
VCP-203ENST00000448530 SYT4Q9H2B2 425 aa16.79■□□□□ 0.28
VCP-203ENST00000448530 NRIP3Q9NQ35 241 aa16.79■□□□□ 0.28
VCP-203ENST00000448530 CGGBP1Q9UFW8 167 aaPredicted RBP16.79■□□□□ 0.28
VCP-203ENST00000448530 IL20RAQ9UHF4 553 aa16.79■□□□□ 0.28
VCP-203ENST00000448530 TAGLN3Q9UI15 199 aa16.79■□□□□ 0.28
VCP-203ENST00000448530 ARL2BPQ9Y2Y0 163 aa16.79■□□□□ 0.28
VCP-203ENST00000448530 IER3IP1Q9Y5U9 82 aa16.79■□□□□ 0.28
VCP-203ENST00000448530 CLDN25C9JDP6 229 aa16.78■□□□□ 0.28
VCP-203ENST00000448530 ICMTO60725 284 aa16.78■□□□□ 0.28
VCP-203ENST00000448530 DCTN3O75935 186 aa16.78■□□□□ 0.28
VCP-203ENST00000448530 GADD45GO95257 159 aa16.78■□□□□ 0.28
VCP-203ENST00000448530 NGFP01138 241 aa16.78■□□□□ 0.28
VCP-203ENST00000448530 SCG5P05408 212 aa16.78■□□□□ 0.28
VCP-203ENST00000448530 HSD17B1P14061 328 aa16.78■□□□□ 0.28
VCP-203ENST00000448530 CTLA4P16410 223 aa16.78■□□□□ 0.28
VCP-203ENST00000448530 GSTM3P21266 225 aa16.78■□□□□ 0.28
VCP-203ENST00000448530 SPIBQ01892 262 aa16.78■□□□□ 0.28
VCP-203ENST00000448530 MVKQ03426 396 aa16.78■□□□□ 0.28
VCP-203ENST00000448530 AQP6Q13520 282 aa16.78■□□□□ 0.28
VCP-203ENST00000448530 SEC23BQ15437 767 aa16.78■□□□□ 0.28
VCP-203ENST00000448530 SMARCD3Q6STE5 483 aa16.78■□□□□ 0.28
VCP-203ENST00000448530 PHC2Q8IXK0 858 aa16.78■□□□□ 0.28
VCP-203ENST00000448530 NPEPL1Q8NDH3 523 aa16.78■□□□□ 0.28
VCP-203ENST00000448530 DHRS1Q96LJ7 313 aa16.78■□□□□ 0.28
VCP-203ENST00000448530 CDRT15Q96T59 188 aa16.78■□□□□ 0.28
VCP-203ENST00000448530 LPAR2Q9HBW0 351 aa16.78■□□□□ 0.28
VCP-203ENST00000448530 NDE1Q9NXR1 346 aa16.78■□□□□ 0.28
VCP-203ENST00000448530 PLEK2Q9NYT0 353 aa16.78■□□□□ 0.28
VCP-203ENST00000448530 STAB1Q9NY15 2570 aa16.77■□□□□ 0.28
VCP-203ENST00000448530 TIMM8AO60220 97 aaPredicted RBP16.77■□□□□ 0.28
VCP-203ENST00000448530 IGHV1-46P01743 117 aa16.77■□□□□ 0.28
VCP-203ENST00000448530 MSMBP08118 114 aa16.77■□□□□ 0.28
VCP-203ENST00000448530 CENPAP49450 140 aa16.77■□□□□ 0.28
VCP-203ENST00000448530 MMP15P51511 669 aa16.77■□□□□ 0.28
VCP-203ENST00000448530 AVPI1Q5T686 147 aa16.77■□□□□ 0.28
VCP-203ENST00000448530 DNM1P34Q6PK57 102 aa16.77■□□□□ 0.28
VCP-203ENST00000448530 C16orf89Q6UX73 402 aa16.77■□□□□ 0.28
VCP-203ENST00000448530 THSD4Q6ZMP0 1018 aa16.77■□□□□ 0.28
VCP-203ENST00000448530 RINLQ6ZS11 566 aa16.77■□□□□ 0.28
VCP-203ENST00000448530 OR51F2Q8NH61 342 aa16.77■□□□□ 0.28
VCP-203ENST00000448530 RAB1CQ92928 201 aa16.77■□□□□ 0.28
VCP-203ENST00000448530 DIRC2Q96SL1 478 aa16.77■□□□□ 0.28
VCP-203ENST00000448530 REPIN1Q9BWE0 567 aaKnown RBP16.77■□□□□ 0.28
VCP-203ENST00000448530 VSX1Q9NZR4 365 aaPredicted RBP16.77■□□□□ 0.28
VCP-203ENST00000448530 ZDHHC8Q9ULC8 765 aa16.77■□□□□ 0.28
VCP-203ENST00000448530 COA3Q9Y2R0 106 aaPredicted RBP16.77■□□□□ 0.28
VCP-203ENST00000448530 POLR1DQ9Y2S0 133 aa16.77■□□□□ 0.28
VCP-203ENST00000448530 GRIP1Q9Y3R0 1128 aa16.77■□□□□ 0.28
VCP-203ENST00000448530 FAM157AC9JC47 383 aa16.76■□□□□ 0.27
VCP-203ENST00000448530 WNT9BO14905 357 aa16.76■□□□□ 0.27
VCP-203ENST00000448530 GAAP10253 952 aa16.76■□□□□ 0.27
VCP-203ENST00000448530 ANPEPP15144 967 aa16.76■□□□□ 0.27
VCP-203ENST00000448530 TUBG1P23258 451 aa16.76■□□□□ 0.27
VCP-203ENST00000448530 MSX2P35548 267 aaPredicted RBP16.76■□□□□ 0.27
VCP-203ENST00000448530 IFNGR2P38484 337 aa16.76■□□□□ 0.27
VCP-203ENST00000448530 LSM6P62312 80 aaKnown RBP16.76■□□□□ 0.27
VCP-203ENST00000448530 FANK1Q8TC84 345 aa16.76■□□□□ 0.27
VCP-203ENST00000448530 TMEM186Q96B77 213 aa16.76■□□□□ 0.27
VCP-203ENST00000448530 RAB39BQ96DA2 213 aa16.76■□□□□ 0.27
VCP-203ENST00000448530 COG8Q96MW5 612 aa16.76■□□□□ 0.27
VCP-203ENST00000448530 TUBG2Q9NRH3 451 aa16.76■□□□□ 0.27
VCP-203ENST00000448530 TBCCD1Q9NVR7 557 aa16.76■□□□□ 0.27
VCP-203ENST00000448530 HIF1ANQ9NWT6 349 aa16.76■□□□□ 0.27
VCP-203ENST00000448530 ASH2LQ9UBL3 628 aa16.76■□□□□ 0.27
VCP-203ENST00000448530 TMCC3Q9ULS5 477 aa16.76■□□□□ 0.27
VCP-203ENST00000448530 ZSCAN5BA6NJL1 495 aa16.75■□□□□ 0.27
VCP-203ENST00000448530 ARPC2O15144 300 aa16.75■□□□□ 0.27
VCP-203ENST00000448530 OR10H3O60404 316 aa16.75■□□□□ 0.27
VCP-203ENST00000448530 TXNDC12O95881 172 aa16.75■□□□□ 0.27
VCP-203ENST00000448530 FABP3P05413 133 aa16.75■□□□□ 0.27
VCP-203ENST00000448530 CRABP1P29762 137 aa16.75■□□□□ 0.27
VCP-203ENST00000448530 SLC6A6P31641 620 aa16.75■□□□□ 0.27
VCP-203ENST00000448530 GYS2P54840 703 aa16.75■□□□□ 0.27
VCP-203ENST00000448530 LMO4P61968 165 aa16.75■□□□□ 0.27
VCP-203ENST00000448530 SLC3A1Q07837 685 aa16.75■□□□□ 0.27
VCP-203ENST00000448530 LIPNQ5VXI9 398 aa16.75■□□□□ 0.27
VCP-203ENST00000448530 PGM2L1Q6PCE3 622 aa16.75■□□□□ 0.27
VCP-203ENST00000448530 VASH1Q7L8A9 365 aaPredicted RBP16.75■□□□□ 0.27
VCP-203ENST00000448530 JAZF1Q86VZ6 243 aa16.75■□□□□ 0.27
VCP-203ENST00000448530 CCL17Q92583 94 aa16.75■□□□□ 0.27
VCP-203ENST00000448530 ERMAPQ96PL5 475 aaPredicted RBP16.75■□□□□ 0.27
VCP-203ENST00000448530 FUZQ9BT04 418 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms