RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 A0A1W2PQ45 241 aaPredicted RBP9.72□□□□□ -0.85
LINC00342-202ENST00000448494 A0A1W2PQY0 241 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 CDHR4A6H8M9 788 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 ZNF727A8MUV8 499 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 ZNF354AO60765 605 aaPredicted RBP9.72□□□□□ -0.85
LINC00342-202ENST00000448494 SLC16A8O95907 504 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 CSTAP01040 98 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 IL2RAP01589 272 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 HLA-AP01891 365 aaKnown RBP9.72□□□□□ -0.85
LINC00342-202ENST00000448494 PGA4P0DJD7 388 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 PGA5P0DJD9 388 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 LIPCP11150 499 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 HSD3B2P26439 372 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 RPL4P36578 427 aaKnown RBP9.72□□□□□ -0.85
LINC00342-202ENST00000448494 ACVR1BP36896 505 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 PDLIM4P50479 330 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 EFNA3P52797 238 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 SP4Q02446 784 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 LYG2Q86SG7 212 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 GBGT1Q8N5D6 347 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 TTC9BQ8N6N2 239 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 OR5D18Q8NGL1 313 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 OR51F2Q8NH61 342 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 ARRDC2Q8TBH0 407 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 GRAPLQ8TC17 118 aaPredicted RBP9.72□□□□□ -0.85
LINC00342-202ENST00000448494 CNTNAP3Q9BZ76 1288 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 SLC5A7Q9GZV3 580 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 RRAGCQ9HB90 399 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 CDH20Q9HBT6 801 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 ANKRD10Q9NXR5 420 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 OR5V1Q9UGF6 321 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 TRPM7Q96QT4 1865 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 RAB27BO00194 218 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 PRICKLE3O43900 615 aaPredicted RBP9.72□□□□□ -0.85
LINC00342-202ENST00000448494 RAMP1O60894 148 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 CD1AP06126 327 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 ZBTB25P24278 435 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 CX3CR1P49238 355 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 UBE2G2P60604 165 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 JAG1P78504 1218 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 IHHQ14623 411 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 RAB11BQ15907 218 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 MARC1Q5VT66 337 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 C17orf64Q86WR6 236 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 TMEM99Q8N816 258 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 SUMF2Q8NBJ7 301 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 REPS2Q8NFH8 660 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 BBS1Q8NFJ9 593 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 CASTOR1Q8WTX7 329 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 SLC25A43Q8WUT9 341 aaPredicted RBP9.72□□□□□ -0.85
LINC00342-202ENST00000448494 LIPHQ8WWY8 451 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 DNASE2BQ8WZ79 361 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 SEPT5Q99719 369 aaPredicted RBP9.72□□□□□ -0.85
LINC00342-202ENST00000448494 SPATC1LQ9H0A9 340 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 SLC32A1Q9H598 525 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 OR2S2Q9NQN1 319 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 HSPB7Q9UBY9 170 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 PRSS21Q9Y6M0 314 aa9.72□□□□□ -0.85
LINC00342-202ENST00000448494 GPR89AB7ZAQ6 455 aa9.71□□□□□ -0.85
LINC00342-202ENST00000448494 SOCS6O14544 535 aa9.71□□□□□ -0.85
LINC00342-202ENST00000448494 GEMIN2O14893 280 aaKnown RBP9.71□□□□□ -0.85
LINC00342-202ENST00000448494 GPR89BP0CG08 455 aa9.71□□□□□ -0.85
LINC00342-202ENST00000448494 OR5H8P0DN80 308 aa9.71□□□□□ -0.85
LINC00342-202ENST00000448494 ALPPL2P10696 532 aa9.71□□□□□ -0.85
LINC00342-202ENST00000448494 PTGER3P43115 390 aa9.71□□□□□ -0.85
LINC00342-202ENST00000448494 ID4P47928 161 aa9.71□□□□□ -0.85
LINC00342-202ENST00000448494 SCAND1P57086 179 aa9.71□□□□□ -0.85
LINC00342-202ENST00000448494 MIDNQ504T8 468 aa9.71□□□□□ -0.85
LINC00342-202ENST00000448494 ZNF311Q5JNZ3 666 aa9.71□□□□□ -0.85
LINC00342-202ENST00000448494 UNQ9370/PRO34162Q6UXP9 181 aa9.71□□□□□ -0.85
LINC00342-202ENST00000448494 CLEC1AQ8NC01 280 aa9.71□□□□□ -0.85
LINC00342-202ENST00000448494 LFNGQ8NES3 379 aa9.71□□□□□ -0.85
LINC00342-202ENST00000448494 NOXO1Q8NFA2 376 aa9.71□□□□□ -0.85
LINC00342-202ENST00000448494 OR2M7Q8NG81 312 aa9.71□□□□□ -0.85
LINC00342-202ENST00000448494 ACY3Q96HD9 319 aa9.71□□□□□ -0.85
LINC00342-202ENST00000448494 OR8B4Q96RC9 309 aa9.71□□□□□ -0.85
LINC00342-202ENST00000448494 SGPP1Q9BX95 441 aa9.71□□□□□ -0.85
LINC00342-202ENST00000448494 IL19Q9UHD0 177 aa9.71□□□□□ -0.85
LINC00342-202ENST00000448494 ST6GALNAC2Q9UJ37 374 aa9.71□□□□□ -0.85
LINC00342-202ENST00000448494 FBXO4Q9UKT5 387 aa9.71□□□□□ -0.85
LINC00342-202ENST00000448494 GPR34Q9UPC5 381 aa9.71□□□□□ -0.85
LINC00342-202ENST00000448494 CKAP5Q14008 2032 aa9.71□□□□□ -0.86
LINC00342-202ENST00000448494 PEX12O00623 359 aa9.71□□□□□ -0.86
LINC00342-202ENST00000448494 P2RX6O15547 441 aa9.71□□□□□ -0.86
LINC00342-202ENST00000448494 NPM3O75607 178 aaKnown RBP9.71□□□□□ -0.86
LINC00342-202ENST00000448494 SLCO2B1O94956 709 aa9.71□□□□□ -0.86
LINC00342-202ENST00000448494 CST4P01036 141 aa9.71□□□□□ -0.86
LINC00342-202ENST00000448494 ZNF286BP0CG31 522 aa9.71□□□□□ -0.86
LINC00342-202ENST00000448494 EPORP19235 508 aa9.71□□□□□ -0.86
LINC00342-202ENST00000448494 PCSK1P29120 753 aa9.71□□□□□ -0.86
LINC00342-202ENST00000448494 HBA1P69905 142 aa9.71□□□□□ -0.86
LINC00342-202ENST00000448494 FAM3AP98173 230 aa9.71□□□□□ -0.86
LINC00342-202ENST00000448494 TAF9Q16594 264 aa9.71□□□□□ -0.86
LINC00342-202ENST00000448494 HIKESHIQ53FT3 197 aa9.71□□□□□ -0.86
LINC00342-202ENST00000448494 AADACL3Q5VUY0 350 aa9.71□□□□□ -0.86
LINC00342-202ENST00000448494 FRG2Q64ET8 278 aa9.71□□□□□ -0.86
LINC00342-202ENST00000448494 PRSS54Q6PEW0 395 aa9.71□□□□□ -0.86
LINC00342-202ENST00000448494 CHST9Q7L1S5 443 aa9.71□□□□□ -0.86
LINC00342-202ENST00000448494 MEPCEQ7L2J0 689 aaKnown RBP9.71□□□□□ -0.86
LINC00342-202ENST00000448494 H1FOOQ8IZA3 346 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms