RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 GPR61Q9BZJ8 451 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 ZNF350Q9GZX5 532 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 SIGLEC7Q9Y286 467 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 PCYT1BQ9Y5K3 369 aaPredicted RBP17.35■□□□□ 0.37
HMGA1-205ENST00000447654 MTCH2Q9Y6C9 303 aa17.35■□□□□ 0.37
HMGA1-205ENST00000447654 BRINP1O60477 761 aa17.34■□□□□ 0.37
HMGA1-205ENST00000447654 OR2C1O95371 312 aa17.34■□□□□ 0.37
HMGA1-205ENST00000447654 AIFM1O95831 613 aa17.34■□□□□ 0.37
HMGA1-205ENST00000447654 ELOCQ15369 112 aa17.34■□□□□ 0.37
HMGA1-205ENST00000447654 ATG2AQ2TAZ0 1938 aa17.34■□□□□ 0.37
HMGA1-205ENST00000447654 FNDC3BQ53EP0 1204 aaKnown RBP17.34■□□□□ 0.37
HMGA1-205ENST00000447654 PEG10Q86TG7 708 aaKnown RBP17.34■□□□□ 0.37
HMGA1-205ENST00000447654 BIVMQ86UB2 503 aa17.34■□□□□ 0.37
HMGA1-205ENST00000447654 AVL9Q8NBF6 648 aa17.34■□□□□ 0.37
HMGA1-205ENST00000447654 TERB2Q8NHR7 220 aa17.34■□□□□ 0.37
HMGA1-205ENST00000447654 TGM7Q96PF1 710 aa17.34■□□□□ 0.37
HMGA1-205ENST00000447654 PRSS27Q9BQR3 290 aa17.34■□□□□ 0.37
HMGA1-205ENST00000447654 GPR174Q9BXC1 333 aa17.34■□□□□ 0.37
HMGA1-205ENST00000447654 PRO1933Q9H354 126 aa17.34■□□□□ 0.37
HMGA1-205ENST00000447654 PRUNE2Q8WUY3 3088 aa17.34■□□□□ 0.37
HMGA1-205ENST00000447654 SYT7O43581 403 aa17.33■□□□□ 0.37
HMGA1-205ENST00000447654 MAKP20794 623 aa17.33■□□□□ 0.37
HMGA1-205ENST00000447654 IL13RA1P78552 427 aa17.33■□□□□ 0.37
HMGA1-205ENST00000447654 CLINT1Q14677 625 aa17.33■□□□□ 0.37
HMGA1-205ENST00000447654 KHDC3LQ587J8 217 aa17.33■□□□□ 0.37
HMGA1-205ENST00000447654 HMGN2P46Q86SG4 172 aa17.33■□□□□ 0.37
HMGA1-205ENST00000447654 OR13C8Q8NGS7 320 aa17.33■□□□□ 0.37
HMGA1-205ENST00000447654 RRNAD1Q96FB5 475 aaKnown RBP17.33■□□□□ 0.37
HMGA1-205ENST00000447654 DTD2Q96FN9 168 aa17.33■□□□□ 0.37
HMGA1-205ENST00000447654 SMDT1Q9H4I9 107 aa17.33■□□□□ 0.37
HMGA1-205ENST00000447654 SPACA1Q9HBV2 294 aa17.33■□□□□ 0.37
HMGA1-205ENST00000447654 PRSS16Q9NQE7 514 aa17.33■□□□□ 0.37
HMGA1-205ENST00000447654 SERTAD3Q9UJW9 196 aa17.33■□□□□ 0.37
HMGA1-205ENST00000447654 SH2B3Q9UQQ2 575 aa17.33■□□□□ 0.37
HMGA1-205ENST00000447654 TGOLN2O43493 480 aa17.33■□□□□ 0.36
HMGA1-205ENST00000447654 LRP3O75074 770 aa17.33■□□□□ 0.36
HMGA1-205ENST00000447654 ZFPL1O95159 310 aa17.33■□□□□ 0.36
HMGA1-205ENST00000447654 THBS1P07996 1170 aa17.33■□□□□ 0.36
HMGA1-205ENST00000447654 CLUP10909 449 aa17.33■□□□□ 0.36
HMGA1-205ENST00000447654 NTSP30990 170 aa17.33■□□□□ 0.36
HMGA1-205ENST00000447654 COTL1Q14019 142 aa17.33■□□□□ 0.36
HMGA1-205ENST00000447654 THEM4Q5T1C6 240 aa17.33■□□□□ 0.36
HMGA1-205ENST00000447654 OR2A2Q6IF42 318 aa17.33■□□□□ 0.36
HMGA1-205ENST00000447654 VITQ6UXI7 678 aa17.33■□□□□ 0.36
HMGA1-205ENST00000447654 RANBP3LQ86VV4 465 aaPredicted RBP17.33■□□□□ 0.36
HMGA1-205ENST00000447654 TMEM239Q8WW34 195 aa17.33■□□□□ 0.36
HMGA1-205ENST00000447654 SEH1LQ96EE3 360 aa17.33■□□□□ 0.36
HMGA1-205ENST00000447654 SLC5A7Q9GZV3 580 aa17.33■□□□□ 0.36
HMGA1-205ENST00000447654 CLDND1Q9NY35 253 aa17.33■□□□□ 0.36
HMGA1-205ENST00000447654 MUC22E2RYF6 1773 aaPredicted RBP17.33■□□□□ 0.36
HMGA1-205ENST00000447654 ZNF736B4DX44 427 aaPredicted RBP17.32■□□□□ 0.36
HMGA1-205ENST00000447654 DVL1O14640 695 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 TOX3O15405 576 aaPredicted RBP17.32■□□□□ 0.36
HMGA1-205ENST00000447654 CYB5AP00167 134 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 ARG1P05089 322 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 VASPP50552 380 aaPredicted RBP17.32■□□□□ 0.36
HMGA1-205ENST00000447654 RPS23P62266 143 aaKnown RBP17.32■□□□□ 0.36
HMGA1-205ENST00000447654 PPP1R1AQ13522 171 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 EIPR1Q53HC9 387 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 YOD1Q5VVQ6 348 aaPredicted RBP17.32■□□□□ 0.36
HMGA1-205ENST00000447654 THSD4Q6ZMP0 1018 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 PRSS35Q8N3Z0 413 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 PRR18Q8N4B5 295 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 ZNF775Q96BV0 537 aaPredicted RBP17.32■□□□□ 0.36
HMGA1-205ENST00000447654 MS4A8Q9BY19 250 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 TAF9BQ9HBM6 251 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 SIRT7Q9NRC8 400 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 DOCK9Q9BZ29 2069 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 PLXND1Q9Y4D7 1925 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 A0A0A6YYH2 397 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 A0A1W2PPE2 198 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 A6NJ64 397 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 DCTN6O00399 190 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 C1orf105O95561 183 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 HMGN2P05204 90 aaKnown RBP17.32■□□□□ 0.36
HMGA1-205ENST00000447654 SNCAP37840 140 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 LASP1Q14847 261 aaKnown RBP17.32■□□□□ 0.36
HMGA1-205ENST00000447654 TOMM34Q15785 309 aaPredicted RBP17.32■□□□□ 0.36
HMGA1-205ENST00000447654 HNRNPA1L2Q32P51 320 aaKnown RBP17.32■□□□□ 0.36
HMGA1-205ENST00000447654 PRRT3Q5FWE3 981 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 C9orf50Q5SZB4 431 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 ZNF547Q8IVP9 402 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 HSD17B11Q8NBQ5 300 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 OR10AD1Q8NGE0 317 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 FGF13Q92913 245 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 SLC25A36Q96CQ1 311 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 MUCL1Q96DR8 90 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 PRAP1Q96NZ9 151 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 OR2AG1Q9H205 316 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 FKRPQ9H9S5 495 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 VSIG4Q9Y279 399 aa17.32■□□□□ 0.36
HMGA1-205ENST00000447654 TRBV5-7A0A0A0MS05 114 aa17.31■□□□□ 0.36
HMGA1-205ENST00000447654 EEF1E1-BLOC1S5C9J1V9 151 aa17.31■□□□□ 0.36
HMGA1-205ENST00000447654 UMAD1C9J7I0 102 aa17.31■□□□□ 0.36
HMGA1-205ENST00000447654 GAPDHP04406 335 aaKnown RBP17.31■□□□□ 0.36
HMGA1-205ENST00000447654 TACSTD2P09758 323 aa17.31■□□□□ 0.36
HMGA1-205ENST00000447654 PET100P0DJ07 73 aa17.31■□□□□ 0.36
HMGA1-205ENST00000447654 SLC6A6P31641 620 aa17.31■□□□□ 0.36
HMGA1-205ENST00000447654 ARRB1P49407 418 aaPredicted RBP17.31■□□□□ 0.36
HMGA1-205ENST00000447654 ZNF84P51523 738 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms