RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 ALG10Q5BKT4 473 aa20.48■□□□□ 0.87
PMS1-214ENST00000446877 LRRN1Q6UXK5 716 aa20.48■□□□□ 0.87
PMS1-214ENST00000446877 C9orf139Q6ZV77 190 aa20.48■□□□□ 0.87
PMS1-214ENST00000446877 LIPHQ8WWY8 451 aa20.48■□□□□ 0.87
PMS1-214ENST00000446877 THOC1Q96FV9 657 aaKnown RBP20.48■□□□□ 0.87
PMS1-214ENST00000446877 RIMS3Q9UJD0 308 aa20.48■□□□□ 0.87
PMS1-214ENST00000446877 RAB21Q9UL25 225 aa20.48■□□□□ 0.87
PMS1-214ENST00000446877 MED31Q9Y3C7 131 aa20.48■□□□□ 0.87
PMS1-214ENST00000446877 A0A1B0GUS0 222 aa20.47■□□□□ 0.87
PMS1-214ENST00000446877 A0A1W2PPL8 197 aa20.47■□□□□ 0.87
PMS1-214ENST00000446877 ANGPT2O15123 496 aa20.47■□□□□ 0.87
PMS1-214ENST00000446877 CPT2P23786 658 aa20.47■□□□□ 0.87
PMS1-214ENST00000446877 RBMXP38159 391 aaKnown RBP20.47■□□□□ 0.87
PMS1-214ENST00000446877 C17orf107Q6ZR85 190 aa20.47■□□□□ 0.87
PMS1-214ENST00000446877 JAZF1Q86VZ6 243 aa20.47■□□□□ 0.87
PMS1-214ENST00000446877 ITLN1Q8WWA0 313 aa20.47■□□□□ 0.87
PMS1-214ENST00000446877 KAT8Q9H7Z6 458 aaKnown RBP20.47■□□□□ 0.87
PMS1-214ENST00000446877 TBCCD1Q9NVR7 557 aa20.47■□□□□ 0.87
PMS1-214ENST00000446877 MMP24Q9Y5R2 645 aa20.47■□□□□ 0.87
PMS1-214ENST00000446877 CEACAM18A8MTB9 384 aa20.46■□□□□ 0.87
PMS1-214ENST00000446877 OR5F1O95221 314 aa20.46■□□□□ 0.87
PMS1-214ENST00000446877 KNG1P01042 644 aa20.46■□□□□ 0.87
PMS1-214ENST00000446877 TSPAN19P0C672 248 aa20.46■□□□□ 0.87
PMS1-214ENST00000446877 MSR1P21757 451 aa20.46■□□□□ 0.87
PMS1-214ENST00000446877 RPL27P61353 136 aaKnown RBP20.46■□□□□ 0.87
PMS1-214ENST00000446877 SYT9Q86SS6 491 aa20.46■□□□□ 0.87
PMS1-214ENST00000446877 DPP10Q8N608 796 aa20.46■□□□□ 0.87
PMS1-214ENST00000446877 LRRC8CQ8TDW0 803 aa20.46■□□□□ 0.87
PMS1-214ENST00000446877 ZDHHC16Q969W1 377 aa20.46■□□□□ 0.87
PMS1-214ENST00000446877 CMBLQ96DG6 245 aa20.46■□□□□ 0.87
PMS1-214ENST00000446877 OR2V2Q96R30 315 aa20.46■□□□□ 0.87
PMS1-214ENST00000446877 SIGLEC11Q96RL6 698 aa20.46■□□□□ 0.87
PMS1-214ENST00000446877 SSBP3Q9BWW4 388 aaPredicted RBP20.46■□□□□ 0.87
PMS1-214ENST00000446877 POLR2J2Q9GZM3 115 aaKnown RBP20.46■□□□□ 0.87
PMS1-214ENST00000446877 POLR2J3Q9H1A7 115 aaKnown RBP20.46■□□□□ 0.87
PMS1-214ENST00000446877 TMEM178BH3BS89 294 aa20.45■□□□□ 0.86
PMS1-214ENST00000446877 IFNL4K9M1U5 179 aa20.45■□□□□ 0.86
PMS1-214ENST00000446877 CRYBA1P05813 215 aa20.45■□□□□ 0.86
PMS1-214ENST00000446877 WNT2P09544 360 aa20.45■□□□□ 0.86
PMS1-214ENST00000446877 RPS2P15880 293 aaKnown RBP20.45■□□□□ 0.86
PMS1-214ENST00000446877 KITLGP21583 273 aa20.45■□□□□ 0.86
PMS1-214ENST00000446877 OCLNQ16625 522 aa20.45■□□□□ 0.86
PMS1-214ENST00000446877 CLDN22Q8N7P3 220 aa20.45■□□□□ 0.86
PMS1-214ENST00000446877 OR10A6Q8NH74 314 aa20.45■□□□□ 0.86
PMS1-214ENST00000446877 UPRTQ96BW1 309 aa20.45■□□□□ 0.86
PMS1-214ENST00000446877 MAGEB18Q96M61 343 aa20.45■□□□□ 0.86
PMS1-214ENST00000446877 BEX1Q9HBH7 125 aa20.45■□□□□ 0.86
PMS1-214ENST00000446877 BAG5Q9UL15 447 aa20.45■□□□□ 0.86
PMS1-214ENST00000446877 SOX21Q9Y651 276 aaPredicted RBP20.45■□□□□ 0.86
PMS1-214ENST00000446877 HOXA3O43365 443 aaPredicted RBP20.44■□□□□ 0.86
PMS1-214ENST00000446877 COX5BP10606 129 aa20.44■□□□□ 0.86
PMS1-214ENST00000446877 GNB2P62879 340 aa20.44■□□□□ 0.86
PMS1-214ENST00000446877 PIN1Q13526 163 aaPredicted RBP20.44■□□□□ 0.86
PMS1-214ENST00000446877 NFYCQ13952 458 aa20.44■□□□□ 0.86
PMS1-214ENST00000446877 VMACQ2NL98 169 aa20.44■□□□□ 0.86
PMS1-214ENST00000446877 ZNF362Q5T0B9 420 aaPredicted RBP20.44■□□□□ 0.86
PMS1-214ENST00000446877 FAM205BPQ63HN1 556 aa20.44■□□□□ 0.86
PMS1-214ENST00000446877 Q6ZR03 302 aa20.44■□□□□ 0.86
PMS1-214ENST00000446877 CCDC80Q76M96 950 aa20.44■□□□□ 0.86
PMS1-214ENST00000446877 ATG16L2Q8NAA4 619 aa20.44■□□□□ 0.86
PMS1-214ENST00000446877 RAB40AQ8WXH6 277 aa20.44■□□□□ 0.86
PMS1-214ENST00000446877 TLCD1Q96CP7 247 aa20.44■□□□□ 0.86
PMS1-214ENST00000446877 PLEKHA8Q96JA3 519 aa20.44■□□□□ 0.86
PMS1-214ENST00000446877 COG8Q96MW5 612 aa20.44■□□□□ 0.86
PMS1-214ENST00000446877 WACQ9BTA9 647 aa20.44■□□□□ 0.86
PMS1-214ENST00000446877 HIF3AQ9Y2N7 669 aa20.44■□□□□ 0.86
PMS1-214ENST00000446877 NOTCH1P46531 2555 aa20.44■□□□□ 0.86
PMS1-214ENST00000446877 PRKDCP78527 4128 aaKnown RBP20.43■□□□□ 0.86
PMS1-214ENST00000446877 A6NIZ1 184 aa20.43■□□□□ 0.86
PMS1-214ENST00000446877 PLATP00750 562 aa20.43■□□□□ 0.86
PMS1-214ENST00000446877 THRBP10828 461 aa20.43■□□□□ 0.86
PMS1-214ENST00000446877 HTR5AP47898 357 aa20.43■□□□□ 0.86
PMS1-214ENST00000446877 CTXN1P60606 82 aa20.43■□□□□ 0.86
PMS1-214ENST00000446877 RAP1BP61224 184 aa20.43■□□□□ 0.86
PMS1-214ENST00000446877 RAP1AP62834 184 aa20.43■□□□□ 0.86
PMS1-214ENST00000446877 SCRN3Q0VDG4 424 aa20.43■□□□□ 0.86
PMS1-214ENST00000446877 ENDOGQ14249 297 aaKnown RBP20.43■□□□□ 0.86
PMS1-214ENST00000446877 SLC27A4Q6P1M0 643 aa20.43■□□□□ 0.86
PMS1-214ENST00000446877 FOXL2NBQ6ZUU3 175 aa20.43■□□□□ 0.86
PMS1-214ENST00000446877 OR4F5Q8NH21 305 aa20.43■□□□□ 0.86
PMS1-214ENST00000446877 HAVCR1Q96D42 359 aa20.43■□□□□ 0.86
PMS1-214ENST00000446877 POFUT1Q9H488 388 aa20.43■□□□□ 0.86
PMS1-214ENST00000446877 GCM1Q9NP62 436 aa20.43■□□□□ 0.86
PMS1-214ENST00000446877 MIOXQ9UGB7 285 aa20.43■□□□□ 0.86
PMS1-214ENST00000446877 STARD10Q9Y365 291 aa20.43■□□□□ 0.86
PMS1-214ENST00000446877 TRAV40A0A0B4J280 105 aa20.42■□□□□ 0.86
PMS1-214ENST00000446877 IGHV2-70DA0A0C4DH43 119 aa20.42■□□□□ 0.86
PMS1-214ENST00000446877 SHOX2O60902 331 aaPredicted RBP20.42■□□□□ 0.86
PMS1-214ENST00000446877 TNFRSF1BP20333 461 aa20.42■□□□□ 0.86
PMS1-214ENST00000446877 MMP16P51512 607 aa20.42■□□□□ 0.86
PMS1-214ENST00000446877 GUCY1A3Q02108 690 aa20.42■□□□□ 0.86
PMS1-214ENST00000446877 KLBQ86Z14 1044 aa20.42■□□□□ 0.86
PMS1-214ENST00000446877 KIR3DL3Q8N743 410 aa20.42■□□□□ 0.86
PMS1-214ENST00000446877 PTP4A1Q93096 173 aa20.42■□□□□ 0.86
PMS1-214ENST00000446877 CCT8L2Q96SF2 557 aa20.42■□□□□ 0.86
PMS1-214ENST00000446877 TMBIM4Q9HC24 238 aa20.42■□□□□ 0.86
PMS1-214ENST00000446877 POLE4Q9NR33 117 aa20.42■□□□□ 0.86
PMS1-214ENST00000446877 MDFIC2A0A1B0GVS7 189 aa20.41■□□□□ 0.86
PMS1-214ENST00000446877 HTR3EA5X5Y0 456 aa20.41■□□□□ 0.86
PMS1-214ENST00000446877 FAM181BA6NEQ2 426 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms